BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001484-TA|BGIBMGA001484-PA|IPR001607|Zinc finger, UBP-type, IPR001394|Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (481 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 96 1e-20 SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 84 4e-17 SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 83 6e-17 SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 73 7e-14 SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 71 3e-13 SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 68 3e-12 SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 64 3e-11 SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 64 4e-11 SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 62 1e-10 SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 52 1e-07 SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 52 2e-07 SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 45 2e-05 SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 45 3e-05 SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 43 8e-05 SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 36 0.009 SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 36 0.017 SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 33 0.088 SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 31 0.47 SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.62 SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.82 SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.82 SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 29 1.4 SPAC23C11.12 |hcn1||anaphase-promoting complex subunit Hcn1|Schi... 29 1.9 SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.9 SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 2.5 SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 28 2.5 SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 2.5 SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 28 3.3 SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 3.3 SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 27 4.4 SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 27 4.4 SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.4 SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 27 5.8 SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 7.7 SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 27 7.7 >SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizosaccharomyces pombe|chr 3|||Manual Length = 979 Score = 95.9 bits (228), Expect = 1e-20 Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%) Query: 328 VALSDCLASFVQVEELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFR 387 + L+DCL F + E+L + + ++ +KQ I R P +L HLKRF FR Sbjct: 825 ITLNDCLDEFEKTEQLGEEDPWYCPTCKEFRQASKQMEIWRCPEILIFHLKRFSSERRFR 884 Query: 388 TKVDTSISFPLRALDVSRFVRDVRRAEHD--ALLYDLAAVIVHHGSGAGSGHYTAFAINE 445 K+D + FP+ LD+S + +E + L+Y+L AV H+G G G GHYTAFA N Sbjct: 885 DKIDDLVEFPIDNLDMSMRTGSYKLSEKENPKLIYELYAVDNHYG-GLGGGHYTAFAKNP 943 Query: 446 E--QWFHFNDHTVRAADSHAVASCKPYILFYIRR 477 + Q++ F+D V + Y+LFY R+ Sbjct: 944 DNGQFYCFDDSRVTPVCPEETVTSAAYLLFYRRK 977 Score = 43.6 bits (98), Expect = 6e-05 Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 207 LQINRKDKKRSPSNGKLQREKKV---VGLKNLGNTCFMNAVLQSLNNIQEFSCYF 258 LQ + + SN + ++EK+V GL NLGNTC+MN+ LQ L + +E +F Sbjct: 285 LQFLIQQRNNQSSNEEQKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFF 339 Score = 31.1 bits (67), Expect = 0.36 Identities = 12/22 (54%), Positives = 15/22 (68%) Query: 298 CLACGTESKKYDPFLDLSLELP 319 C C T S +DPF+DL+L LP Sbjct: 473 CPVCNTVSITFDPFMDLTLPLP 494 >SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizosaccharomyces pombe|chr 1|||Manual Length = 449 Score = 84.2 bits (199), Expect = 4e-17 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 21/185 (11%) Query: 296 VRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXXXX 355 V CL C E DP +D+SL++ E L CL FV E++ + Sbjct: 273 VTCLDCKKERVAVDPLMDISLDINEP-------TLQGCLERFVSKEKVQ-----YSCHSC 320 Query: 356 XXXXXTKQFWIRRLPNVLCLHLKRFRWHNY-FRTKVDTSISFPLRALDVSRFVRDVRRAE 414 KQ +LP +C+ LKRF +N+ TK+D +S+P F+R Sbjct: 321 GSKNAIKQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQVSYPA-------FLRMRYNFN 373 Query: 415 HDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQWFHFNDHTVRAADSHAVASCKPYILFY 474 D + Y L +V+ H G+ +GHY A+ + QWF +D T+ V + + Y+LFY Sbjct: 374 QDDVDYQLYSVVCHKGT-LDTGHYIAYTYYQNQWFLLDDTTIVEVKESEVLNSQAYLLFY 432 Query: 475 IRREL 479 R++ Sbjct: 433 HERQI 437 Score = 34.7 bits (76), Expect = 0.029 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 28 CSECS-VPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDDYI 85 CS C + +++ CL C V C H + HA H + + YC+ C DY+ Sbjct: 38 CSTCKRINKRSIRCLSCHSVGC--LWGHHGEEHAMEHTHMIGVDVKNGHTYCFGCQDYV 94 Score = 31.1 bits (67), Expect = 0.36 Identities = 11/18 (61%), Positives = 16/18 (88%) Query: 231 GLKNLGNTCFMNAVLQSL 248 G++NLG TCFM+ +LQS+ Sbjct: 146 GIQNLGATCFMSVILQSI 163 >SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizosaccharomyces pombe|chr 3|||Manual Length = 457 Score = 83.4 bits (197), Expect = 6e-17 Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 13/188 (6%) Query: 294 RKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXX 353 +++ C C S Y LDLS++ +L+D L FV E+L +Y Sbjct: 257 QQILCSVCKKPSNTYQALLDLSVDAKGS-------SLADSLKHFVHAEKLTKQNKYRCEN 309 Query: 354 XXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRDVRRA 413 +KQ I R PN+L +H KRF ++ + +K+ IS+P + ++ ++ D Sbjct: 310 CKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYP-ESFNLGPYMSD---- 364 Query: 414 EHDALLYDLAAVIVHHGSGAGSGHYTAFAINEE-QWFHFNDHTVRAADSHAVASCKPYIL 472 + + Y+L V+VH G SGHY +F + W F+D V + V + + YIL Sbjct: 365 PNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYIL 424 Query: 473 FYIRRELS 480 Y R+ S Sbjct: 425 QYKRKSTS 432 Score = 34.3 bits (75), Expect = 0.038 Identities = 14/16 (87%), Positives = 15/16 (93%) Query: 231 GLKNLGNTCFMNAVLQ 246 GL NLGNTCFMN+VLQ Sbjct: 126 GLVNLGNTCFMNSVLQ 141 >SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizosaccharomyces pombe|chr 3|||Manual Length = 849 Score = 73.3 bits (172), Expect = 7e-14 Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%) Query: 328 VALSDCLASFVQVEELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHN--- 384 + L DCL F + E+L + ++ TK+ I RLP +L +HL RF H Sbjct: 690 ITLEDCLLEFSKPEQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGGDL 749 Query: 385 YFRTKVDTSISFPLRALD----VSRFVRDVR-RAEHDALLYDLAAVIVHHGSGAGSGHYT 439 R K + +P+ L+ +S F++D + ++LYDL AV HHG +GHYT Sbjct: 750 RRRRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHGF-MSNGHYT 808 Query: 440 AFA--INEEQWFHFNDHTVRAADSHAVASCKPYILFY 474 A+A + + +F F+D + D + + Y+LFY Sbjct: 809 AYARDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFY 845 Score = 37.9 bits (84), Expect = 0.003 Identities = 17/46 (36%), Positives = 26/46 (56%) Query: 213 DKKRSPSNGKLQREKKVVGLKNLGNTCFMNAVLQSLNNIQEFSCYF 258 D N + +E + GL NLGN+C+MN+ LQ + + E + YF Sbjct: 262 DSITKEQNLTINKEIGLCGLYNLGNSCYMNSALQCMIHTHELTKYF 307 >SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosaccharomyces pombe|chr 2|||Manual Length = 585 Score = 71.3 bits (167), Expect = 3e-13 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 9/163 (5%) Query: 295 KVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXXX 354 + +CL C + + + FLDLS+++ N T V + CL SF E L+ ++ Sbjct: 241 ETKCLTCENITSRDESFLDLSIDI----ENHTSV--TSCLRSFSASEMLSSKNKFHCDVC 294 Query: 355 XXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRDVRRAE 414 K+ I++LP +L LHLKRF+++ + + + + + R AE Sbjct: 295 KSLQEAEKRMKIKKLPKILSLHLKRFKYNE--TQEGHDKLFYTIVFTNEMRLFTTTEDAE 352 Query: 415 HDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQ-WFHFNDHTV 456 + +Y L++VIVH G G GHY + + W F+D V Sbjct: 353 NAERMYYLSSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENV 395 Score = 33.9 bits (74), Expect = 0.051 Identities = 16/43 (37%), Positives = 24/43 (55%) Query: 231 GLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMKANGRKV 273 GL N GNTC++++VL SL +++ F N P N + V Sbjct: 42 GLTNYGNTCYVSSVLVSLYHLKPFRDSLNSYPLPSAPPNFKSV 84 >SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizosaccharomyces pombe|chr 2|||Manual Length = 438 Score = 67.7 bits (158), Expect = 3e-12 Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 15/212 (7%) Query: 275 HSRSYTRQEMNDVVMAEELRKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCL 334 H RS +N+ V + + +C+ CG S + PF L++ + +V V+L +CL Sbjct: 217 HLRSNKSIVVNNFV-GQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSH---VVSLQECL 272 Query: 335 ASFVQVEELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDT-- 392 F E L + + K I +LP L + ++RF+ R K+DT Sbjct: 273 LKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRKKIDTPL 332 Query: 393 --SISFPLRALDVSRFVRDVRRAEHDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQWFH 450 S+ P + L F + + Y+L A I H+G +GHY + + +W H Sbjct: 333 GLSLQIPSKMLVPPSFQSGIGYIPSN---YNLFAFICHYGQ-LENGHYISDVLFNNEWCH 388 Query: 451 FNDHTVRAADSHAVAS---CKPYILFYIRREL 479 +D VR YILFY R L Sbjct: 389 IDDSIVRTVGGITDLREDFSSSYILFYKRSSL 420 Score = 36.3 bits (80), Expect = 0.009 Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 5/36 (13%) Query: 230 VGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLE 265 +GL NLGNTC+MN VLQ L F+C +P L+ Sbjct: 72 IGLTNLGNTCYMNCVLQCL-----FACKDLTIPMLQ 102 >SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ubp21|Schizosaccharomyces pombe|chr 2|||Manual Length = 1129 Score = 64.5 bits (150), Expect = 3e-11 Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 24/242 (9%) Query: 223 LQREKKVVGLKNLGNTCFMNAVLQSL-NNIQEFSCYFNQLPSLEMKANGRKVYHSRSYTR 281 L+++++ V L + N+ + ++IQEF+ +LE K G +V ++ Sbjct: 283 LEKQREPVSTTELTRSFGWNSFDSFMQHDIQEFNRVLQD--NLEKKMKGTEVENA----- 335 Query: 282 QEMNDVVMAEELRKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVE 341 +ND+ + + V+C+ ES + + F D+ L + + DT L D +QVE Sbjct: 336 --LNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGM---DT---LEDSFRDAIQVE 387 Query: 342 ELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWH--NYFRTKVDTSISFPLR 399 L +Y+ K LPNVL L LKRF + K++ FPL Sbjct: 388 TLTGDNKYYAEGHGLQDAH-KGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLE 446 Query: 400 ALDVSRFVRDVRRAEHDALLYDLAAVIVHHGSGAGSGHYTAFAINEE--QWFHFNDHTVR 457 +D+ ++ + + ++ +Y L V+VH G G GHY A E+ WF F+D V Sbjct: 447 -IDLEPYLSET-ADKSESHVYVLHGVLVHGGDLHG-GHYYALIKPEKDSNWFKFDDDRVT 503 Query: 458 AA 459 A Sbjct: 504 RA 505 Score = 35.9 bits (79), Expect = 0.013 Identities = 16/29 (55%), Positives = 21/29 (72%) Query: 220 NGKLQREKKVVGLKNLGNTCFMNAVLQSL 248 N ++E VGLKN G TC+MN++LQSL Sbjct: 220 NYNSKKETGYVGLKNQGATCYMNSLLQSL 248 >SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosaccharomyces pombe|chr 2|||Manual Length = 512 Score = 64.1 bits (149), Expect = 4e-11 Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 6/108 (5%) Query: 361 TKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTS-ISFPLR-ALDVSRFVRDVRRAEHDAL 418 TKQ +I LP VL LHLKRF + T+ + I++P R ++ + F VR + H Sbjct: 377 TKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSIPQNVFSPSVRGSIHPE- 435 Query: 419 LYDLAAVIVHHGSGAGSGHYTAFA--INEEQWFHFNDHTVRAADSHAV 464 YDL AV+ HHG+ A GHYT +++ WF +D + H V Sbjct: 436 -YDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDV 482 Score = 29.5 bits (63), Expect = 1.1 Identities = 11/18 (61%), Positives = 14/18 (77%) Query: 231 GLKNLGNTCFMNAVLQSL 248 G N GN CFMN++LQ+L Sbjct: 134 GFINTGNICFMNSILQAL 151 >SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Schizosaccharomyces pombe|chr 2|||Manual Length = 775 Score = 62.5 bits (145), Expect = 1e-10 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 20/95 (21%) Query: 3 CEHLLDNVKLEQIKVEDTKITK--NFSCSECSVPEQNWLCLHCGVVNCGRYV------NG 54 C+H+++ + +T +T N +CS+C + E W+CL CG ++CGR NG Sbjct: 153 CDHIIN------LPENETYVTNLDNATCSKCDLAENLWMCLTCGALSCGRKQYGGGGGNG 206 Query: 55 HAKNHADTLGHQLCISCDAYS------VYCYKCDD 83 HA +H D GH L + + S +YCY CD+ Sbjct: 207 HALSHYDDTGHPLAVKLKSISPDGQADIYCYSCDE 241 Score = 43.2 bits (97), Expect = 8e-05 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 420 YDLAAVIVHHGSGAGSGHYTAFAINE----EQWFHFNDHTVRAADSHAVASCKPYILFYI 475 Y+L A+I H GS A +GHY AF E +QW FND V S A Y+ + Sbjct: 713 YNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQVASLEEAKTTGYVYLFE 772 Query: 476 R 476 R Sbjct: 773 R 773 Score = 37.5 bits (83), Expect = 0.004 Identities = 14/29 (48%), Positives = 24/29 (82%) Query: 229 VVGLKNLGNTCFMNAVLQSLNNIQEFSCY 257 + GLKNLGN+C++ + +QSL +I+EF+ + Sbjct: 299 LTGLKNLGNSCYLASTMQSLFSIKEFAIH 327 >SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 547 Score = 52.4 bits (120), Expect = 1e-07 Identities = 20/58 (34%), Positives = 30/58 (51%) Query: 28 CSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDDYI 85 C+ C + W+CL CG + CGRY + HAK H H + + V+ Y D+Y+ Sbjct: 262 CTVCCYDKDLWICLICGNIGCGRYHDAHAKQHYVDTAHCYAMELETQRVWDYAGDNYV 319 >SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosaccharomyces pombe|chr 2|||Manual Length = 502 Score = 51.6 bits (118), Expect = 2e-07 Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 13/175 (7%) Query: 310 PFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADT-ERYFXXXXXXXXXXTKQFWIRR 368 PFL L+L+LP P+ + + + EL + +Y ++F + Sbjct: 331 PFLYLTLDLPP-----KPIFQDEFEGNIIPQVELKEILNKYNGVHTQELAGMRRRFHLMT 385 Query: 369 LPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRD--VRRAEHDALLYDLAAVI 426 P H+KRF +NYF + T ++FPL D+S F+ D ++ + Y+L A I Sbjct: 386 APPYFIFHIKRFMKNNYFTERNQTIVTFPLDDFDMSPFIDDSFIQSNPKISTKYNLVANI 445 Query: 427 VHHGSGAGSGHYTAFAI-----NEEQWFHFNDHTVRAADSHAVASCKPYILFYIR 476 +H + F I + +W+ D V S + + +I + R Sbjct: 446 IHESVTHAEEEFHNFRIQIRNPSTNKWYQIQDLYVEEISSDMIRLGESFIQLWER 500 Score = 31.5 bits (68), Expect = 0.27 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 31 CSVPEQN---WLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVY 77 CSV N + CL CG GR + HA HA T H + ++C Y Sbjct: 77 CSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVNCSTLKFY 126 >SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Schizosaccharomyces pombe|chr 3|||Manual Length = 1108 Score = 45.2 bits (102), Expect = 2e-05 Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 14/168 (8%) Query: 296 VRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXXXX 355 + C+ ES + + + D+ L + + +N L D S++QVE L YF Sbjct: 331 IACVNVNFESARSEDYWDIQLNVKGM-KN-----LEDSFRSYIQVETLEGDNCYF-ADTY 383 Query: 356 XXXXXTKQFWIRRLPNVLCLHLKRFRW--HNYFRTKVDTSISFPLRALDVSRFVRDVRRA 413 K P +L L LKRF + K++ FPL D F+ Sbjct: 384 GFQEAKKGVIFESFPPILHLQLKRFEYDFERDMMIKINDRYEFPLE-FDAKAFL-SPEAD 441 Query: 414 EHDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQ--WFHFNDHTVRAA 459 + Y L V+VH G +GHY A E+ W+ ++D V A Sbjct: 442 QSQNCEYVLYGVLVHSGD-LHNGHYYALLKTEKDGPWYKYDDTRVTRA 488 Score = 43.6 bits (98), Expect = 6e-05 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%) Query: 230 VGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMKANGRKVYHSRS--YTRQEMNDV 287 VGLKN G TC+MN++LQSL I F Q+P+ + Y + Y Q MN+ Sbjct: 213 VGLKNQGATCYMNSLLQSLYIIHAFRRIVYQIPTDSPQGKDSIAYALQRCFYNLQFMNEP 272 Query: 288 VMAEELRK 295 V EL K Sbjct: 273 VSTTELTK 280 >SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosaccharomyces pombe|chr 1|||Manual Length = 875 Score = 44.8 bits (101), Expect = 3e-05 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%) Query: 2 ECEHLLDNVKLEQIK-----VEDTKITKNFSCSECSVPEQNW---LCLHCGVVNCGRYVN 53 EC HL VKL +K + D F C+ + +++ LC +CG + C + + Sbjct: 55 ECSHLKKGVKLSHLKGNARALRDPSKHLCFICTTEKIKREDYELTLCANCGYLFCCNHES 114 Query: 54 GHAKNHAD-TLGHQLCISCDAYSVYCYKCD-DYIINDTEN 91 H++ H + H + ++ +CY CD D +I D +N Sbjct: 115 DHSRKHFEKNKKHCVFVNIITLKCHCYSCDADIVIFDKKN 154 Score = 43.2 bits (97), Expect = 8e-05 Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%) Query: 211 RKDKKRSPSNGKLQREKKVV--GLKNLGNTCFMNAVLQSL 248 +K+KK S+GK ++ KV+ GLKNLG TCF N+ LQ L Sbjct: 187 KKEKKSKHSSGKSSKKYKVISPGLKNLGATCFFNSTLQVL 226 Score = 39.5 bits (88), Expect = 0.001 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 31/136 (22%) Query: 369 LPNVLCLHLKRFRW---HNYFRT--KVDTSISFPLRALDVSRFVRDVRRAEHDALLYDLA 423 LP V +HLKRF H+ + K+ I F + LD++ FV RA + Y L Sbjct: 742 LPPVFIIHLKRFFQEISHDGYANPKKISDFIEFE-QELDLNEFVMPHLRAS-SSFRYRLF 799 Query: 424 AVIVHHGSGAGSGHYTAFAIN-----------------------EEQWFHFNDHTVRAAD 460 VIVH G+ GHY A+ ++ E +W + +D+ VR + Sbjct: 800 GVIVHSGT-LNYGHYVAYVLSHKFLDLSAPSTNSKDFRSEAGIPERRWLYISDNIVRESS 858 Query: 461 SHAVASCKPYILFYIR 476 V+ + Y+LFY R Sbjct: 859 WDEVSKVEAYMLFYER 874 >SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosaccharomyces pombe|chr 1|||Manual Length = 467 Score = 43.2 bits (97), Expect = 8e-05 Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Query: 419 LYDLAAVIVHHGSGAGSGHYTAF---AINEEQWFHFNDHTV 456 LYDL V+ H G+ A SGHY A+ + N +WF FND V Sbjct: 396 LYDLVGVLSHAGASASSGHYQAWIRNSNNRAEWFRFNDAKV 436 Score = 35.9 bits (79), Expect = 0.013 Identities = 17/33 (51%), Positives = 21/33 (63%) Query: 231 GLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPS 263 GL NLGNTC+MN+ +Q L I E S +Q S Sbjct: 101 GLINLGNTCYMNSTVQMLRAIPELSDAVSQFNS 133 >SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 1141 Score = 36.3 bits (80), Expect = 0.009 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 9/67 (13%) Query: 420 YDLAAVIVHHGSGAGSGHYTAFAINEEQ--WFHFNDHTVRAADSHAV------ASCKPYI 471 YDL AV VH G A GHY + + E + +ND V D + + PY+ Sbjct: 1060 YDLLAVFVHRGQ-ASFGHYWTYIHDFENNVYRKYNDEYVTVVDESEIFADTTGNNANPYM 1118 Query: 472 LFYIRRE 478 L YIR+E Sbjct: 1119 LTYIRKE 1125 Score = 27.9 bits (59), Expect = 3.3 Identities = 8/17 (47%), Positives = 15/17 (88%) Query: 230 VGLKNLGNTCFMNAVLQ 246 +GL+N GN C++N+++Q Sbjct: 614 IGLENTGNLCYLNSLIQ 630 >SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizosaccharomyces pombe|chr 2|||Manual Length = 350 Score = 35.5 bits (78), Expect = 0.017 Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Query: 217 SPSNGK-LQREKKVVGLKNL-GNTCFMNAVLQSL 248 SPS GK L + + GL N+ GN CF+N VLQSL Sbjct: 35 SPSTGKRLVKNASIKGLYNVSGNDCFLNCVLQSL 68 Score = 35.5 bits (78), Expect = 0.017 Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 16/191 (8%) Query: 294 RKVRCLACGTESKKYDPFLDLSLELP-EVGRNDTPVALSDCLASFVQ-VEELADTERYFX 351 +KV+C C S Y + L LP E N LS A Q + + + Sbjct: 170 QKVQCCQCLAISISYSTATSIQLCLPPEYSGNSNVSLLSLMEADREQHISDYKCDSCFKS 229 Query: 352 XXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRDVR 411 + + P +L + L+R + T+ + SISFP + + ++ Sbjct: 230 SPKHSKTSCIRTVDWKNPPTILQIQLERTSYTCQGLTRNNVSISFPSKLI--------LK 281 Query: 412 RAEHDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQWFHFNDHTV-RAADSHAVASCKPY 470 H Y L ++I H GS GHY + + ++ W+ ND + +++ + A++ + Sbjct: 282 NKHH----YILRSLITHSGS-VTYGHYLCYRLQDDIWWKANDSLITKSSLNEALSQTRSA 336 Query: 471 ILFYIRRELSL 481 L + E L Sbjct: 337 CLLFYEMESPL 347 >SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity factor complex subunit Rna14|Schizosaccharomyces pombe|chr 1|||Manual Length = 733 Score = 33.1 bits (72), Expect = 0.088 Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%) Query: 143 LNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSS 202 L I + P++ L E E +++ + I+ T ES+ + R + S+ SSS Sbjct: 352 LQTIRRGMRYCPSNFVLHVRYAEHEEANNRTSE-IRSTYESLIAALAREISQLDSKASSS 410 Query: 203 TENSLQINRKDKKRSPSNGKLQREKKVVGLKNLGNTCFMNAV 244 +E+S N ++KK P + ++R+ ++V +L C +NA+ Sbjct: 411 SESSTDGNPQEKK-LPEH-LVKRKSRLVRQYSLAWCCLINAI 450 >SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces pombe|chr 1|||Manual Length = 2104 Score = 30.7 bits (66), Expect = 0.47 Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 15/160 (9%) Query: 111 QNSREKQEDSRQDEDDCDANIPGLVTAPDDIVL---NVIEGDIAVQPTSSSL----DPHS 163 + REK RQD A I + T D++VL N+++ + +Q SL + S Sbjct: 1758 EEEREKNLRIRQDNRHMHAEIGDIRTKFDELVLEKTNLLKENSILQADLQSLSRVNNSSS 1817 Query: 164 TEIENCDSKLDKC------IKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRS 217 T +N S+L ++ +++R + + + + E S Q+N+K + Sbjct: 1818 TAQQNAQSQLLSLTAQLQEVREANQTLRKDQDTLLRENRNLERKLHEVSEQLNKKFDSSA 1877 Query: 218 PSNGKLQREKKVVGLK-NLG-NTCFMNAVLQSLNNIQEFS 255 +++ EK+V+ LK NL ++++++ + I+ F+ Sbjct: 1878 RPFDEIEMEKEVLTLKSNLAQKDDLLSSLVERIKQIEMFA 1917 >SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schizosaccharomyces pombe|chr 2|||Manual Length = 451 Score = 30.3 bits (65), Expect = 0.62 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 5/125 (4%) Query: 109 EKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIEN 168 EK +S + S D+ D++ ++ +D + D + +S D S+ + Sbjct: 94 EKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS---S 150 Query: 169 CDSKLDKCIKGTEESIRSLRPRSRKRTHSEDS--SSTENSLQINRKDKKRSPSNGKLQRE 226 DS+ + +G++ S S S + DS SS+++ + + +D S S+ + E Sbjct: 151 SDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESE 210 Query: 227 KKVVG 231 G Sbjct: 211 SSSEG 215 Score = 30.3 bits (65), Expect = 0.62 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 8/122 (6%) Query: 88 DTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPG------LVTAPDDI 141 D++++ +D NS + ++DS D D ++ ++ D Sbjct: 251 DSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDS 310 Query: 142 VLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSS 201 + +G+ T+S + + S+ +K + S + +S KR H +D S Sbjct: 311 SSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSS--KIHDKSLKRKHEDDES 368 Query: 202 ST 203 ST Sbjct: 369 ST 370 Score = 29.9 bits (64), Expect = 0.82 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 1/135 (0%) Query: 94 DKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQ 153 D ND +S + + +S ++ D ++ + + + + Sbjct: 113 DSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE 172 Query: 154 PTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKD 213 SSS D S+ + DS+ + + ++ S S S + DSSS+ +S + Sbjct: 173 SESSSEDNDSSS-SSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSS 231 Query: 214 KKRSPSNGKLQREKK 228 + S+ E + Sbjct: 232 EDNDSSSSSSDSESE 246 Score = 27.1 bits (57), Expect = 5.8 Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 3/141 (2%) Query: 88 DTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIE 147 D +++ +D +S + + +S + D ++ + + Sbjct: 125 DNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSS 184 Query: 148 GDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDS--SSTEN 205 + SSS D S+ + DS+ + +G++ S S S + DS SS+++ Sbjct: 185 SSSDSESESSSEDSDSSS-SSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS 243 Query: 206 SLQINRKDKKRSPSNGKLQRE 226 + + +D S S+ + E Sbjct: 244 ESESSSEDSDSSSSSSDSESE 264 >SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccharomyces pombe|chr 2|||Manual Length = 1102 Score = 29.9 bits (64), Expect = 0.82 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 133 GLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSR 192 G+V P +V ++A QP +S P T + + + + I + PR + Sbjct: 760 GVVQQPYQTQPSVTNNNVATQPVIASTVPVQTAAPSSQTAVPQTI----HQSNAFTPRGK 815 Query: 193 KRTHSEDSSSTENSLQINRKDKKRSPSN 220 + S +S S+ S Q D+ RS +N Sbjct: 816 HASGSRNSISSTKSPQHKLSDQPRSRNN 843 >SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 750 Score = 29.9 bits (64), Expect = 0.82 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 15/138 (10%) Query: 152 VQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINR 211 ++ SSL E + K+++ +E L ++K + E + S ENS N Sbjct: 568 IKSLESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKK--YQELAISFENS---NV 622 Query: 212 KDKKRSPSNG----KLQREKKVVGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMK 267 K + P NG L+ E + + LKNL ++ LQ + F FNQL + Sbjct: 623 KTQSVEPDNGLSLEALKNENQTL-LKNLEDSTARYEHLQ-----KSFKNVFNQLRKQQPS 676 Query: 268 ANGRKVYHSRSYTRQEMN 285 +GR SRS + E+N Sbjct: 677 NHGRNSSVSRSSSSVEVN 694 >SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 601 Score = 29.1 bits (62), Expect = 1.4 Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 12/188 (6%) Query: 109 EKQNSREKQEDSRQDEDDCDANIPG----LVTAPDDIVLNVIEGDIAVQPTSSSLDPHST 164 E SR+K++ D +D D IP +T + N++ D + S S + Sbjct: 193 ENMGSRKKRKGFVIDSEDSDTGIPREENVTITRKTKLSSNILYSDSDTERQSDSGSKNVA 252 Query: 165 EIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNGKLQ 224 + + K + + E S P + + EN ++ ++ + P + Sbjct: 253 RQFSRIKRKRKVLSSSSEDDESSSPEDLLKPIIRSTEEMENLNELEQEVQDLDPIDEGF- 311 Query: 225 REKKVVGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMKANGRKVYHSRSYTRQEM 284 E+KV +N F L SL N +++L SL + + + S E Sbjct: 312 -EEKVPRFRNPSKKAFYEK-LHSLRNRS-----YSKLESLTSEKSDTLITKSELANESEE 364 Query: 285 NDVVMAEE 292 +D ++ +E Sbjct: 365 DDFIVDDE 372 >SPAC23C11.12 |hcn1||anaphase-promoting complex subunit Hcn1|Schizosaccharomyces pombe|chr 1|||Manual Length = 80 Score = 28.7 bits (61), Expect = 1.9 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 177 IKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNGKLQREKKV 229 I+ T E + + ++T + S+TE +LQ N + + SP K+ RE+++ Sbjct: 9 IQITAEDVLAYDEEKLRQT-LDSESTTEEALQKNEESTRLSPEKKKIIRERRI 60 >SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual Length = 500 Score = 28.7 bits (61), Expect = 1.9 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 4/124 (3%) Query: 108 DEKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIE 167 +EK+ S + S + E++ +A + + + + + + S S S E E Sbjct: 131 EEKKESSSESSSSSESEEEEEAVVK--IEEKKESSSDSSSESSSSESESESSSSESEEEE 188 Query: 168 NCDSKLDKCIKGTEESIRSLRPRSRKRTHS--EDSSSTENSLQINRKDKKRSPSNGKLQR 225 K ++ +G+ ES S + S DSSS S + +KKR +R Sbjct: 189 EVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEER 248 Query: 226 EKKV 229 K+ Sbjct: 249 PAKI 252 >SPCC18.03 |||shuttle craft like transcriptional regulator|Schizosaccharomyces pombe|chr 3|||Manual Length = 1077 Score = 28.3 bits (60), Expect = 2.5 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 18/236 (7%) Query: 111 QNSREKQEDSRQDEDDCDANIPGLVTAPDDIV-LNVIEG------DI--AVQPTSSSLDP 161 QN+ E + ++D + + P V LNV + DI AV L Sbjct: 49 QNNEEVKTSLKEDSSKFHPSASAPIFVPTSSVQLNVSKNNGHKASDIVDAVSSKDEELRK 108 Query: 162 HSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNG 221 H+ + K +E+ L+ + + S S N + +R+ K R P N Sbjct: 109 HAKGEGKRSKNRKRSSKHSEKQAVDLKSSNSSQETSSSKGSVNNKSERSREAKSRMPKNS 168 Query: 222 KLQREKKVVGLKNLGNTCFMNAVLQSLNNIQEFS-CYFNQLPSLEMKANGR--KVYHSRS 278 K KK + L L T M +++ N + E S C PS + + G V+H Sbjct: 169 K--EIKKGLDLSKLDMTSRM--IVELKNRLYECSVCTDTINPSTSIWSCGTCYHVFHLSC 224 Query: 279 YTRQEMNDVVMAEE--LRKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSD 332 + N + E R C + TE+ + E PE +N P + D Sbjct: 225 IRKWCKNSIEQRNEDAWRCPYCQSNQTETSLHYLCWCGKQEKPEFVKNLVPHSCGD 280 >SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces pombe|chr 2|||Manual Length = 1418 Score = 28.3 bits (60), Expect = 2.5 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%) Query: 115 EKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLD 174 EKQED+ DE D +N G D+ ++ ++ D S ++ + D Sbjct: 1069 EKQEDTSTDESDIKSNKFGFFRVWDNKHISSNHYEVKENVLVDEEDVWSVILKQREK--D 1126 Query: 175 KCIKGTEESIRSLRPRSRKRTH-SEDSSSTENS 206 ++ T+E+ + R R+ + H ED + +NS Sbjct: 1127 AMLEKTDETTSNRRLRAHHKIHYGEDLNIYDNS 1159 >SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1067 Score = 28.3 bits (60), Expect = 2.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Query: 193 KRTHSEDSSSTENSLQINRKDKKRSPSNGK 222 K+TH+ED S T SL K KK+ + K Sbjct: 72 KKTHNEDESHTNESLPSTDKKKKKDNDDFK 101 >SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces pombe|chr 2|||Manual Length = 516 Score = 27.9 bits (59), Expect = 3.3 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%) Query: 158 SLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRS 217 +LDP S+++ ++ + K +S RP++ + T S+ +ST KK S Sbjct: 146 TLDPDSSQLPTYKTEYSETTKFPLG--KSYRPKASRTTSSQSVASTMTKSSTKTSKKKSS 203 Query: 218 PSNGK 222 N K Sbjct: 204 KKNSK 208 >SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Schizosaccharomyces pombe|chr 1|||Manual Length = 1194 Score = 27.9 bits (59), Expect = 3.3 Identities = 17/64 (26%), Positives = 28/64 (43%) Query: 140 DIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSED 199 D + NV I SL+ +EIE+ D K+ C+ +++ SL+ R +D Sbjct: 668 DAIKNVKTYQIKFSDLQESLEKCRSEIESFDQKITACLDDLQKAQLSLKQFERDHIPLKD 727 Query: 200 SSST 203 T Sbjct: 728 ELVT 731 >SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosaccharomyces pombe|chr 1|||Manual Length = 216 Score = 27.5 bits (58), Expect = 4.4 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%) Query: 150 IAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQI 209 I +Q ++SL P EI +DK I+ T + SLR + K+ E T+ + Sbjct: 115 IELQALNNSLSP--AEIREKIQSIDKEIEETSSKLESLRNGTVKQISKEAMQKTDKNYDF 172 Query: 210 NRK 212 +K Sbjct: 173 AKK 175 >SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1133 Score = 27.5 bits (58), Expect = 4.4 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 8 DNVKLEQIKVEDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGH 55 D +K++ +K + IT+ C C+ P QN L L+C CG ++ H Sbjct: 860 DILKIDTLKSFEALITECPIC--CNEPIQNPLLLNCKHACCGDCLSEH 905 >SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 317 Score = 27.5 bits (58), Expect = 4.4 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 155 TSSSLDPHSTEIENCDSKLDKCIKGTEES-IRSLRPRSRKRTHSEDSSSTENSLQINRKD 213 TSSS P S+ + S K + S S S K + S SSS +S + Sbjct: 148 TSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSK 207 Query: 214 KKRSPSNGK 222 SPS+ K Sbjct: 208 SSASPSSSK 216 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 27.1 bits (57), Expect = 5.8 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 17/119 (14%) Query: 117 QEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKC 176 +ED ++E D D + L +D+V + GD + S S D ++E + DS K Sbjct: 125 EEDEEEEESDEDYD---LSPTEEDLV-ETVSGDEESEEESESEDNSASEEDELDSAPAK- 179 Query: 177 IKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNGKLQREKKVVGLKNL 235 + ++ +KRT +D S E + + + K+ G +EKKV + L Sbjct: 180 ----KAQVK------KKRT--KDESEQEEAASPKKNNTKKQKVEGTPVKEKKVAFAEKL 226 >SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 2685 Score = 26.6 bits (56), Expect = 7.7 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 111 QNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCD 170 +N +++E+ Q E D ++N G + N E D P+SS D S D Sbjct: 2385 RNHDKRKENGSQGEAD-NSNYSGSLMRRRT---NDQEEDALATPSSSRRDSRSKRASLID 2440 Query: 171 SKLDKCIKGTEESIRSLR 188 +DKC+ +E L+ Sbjct: 2441 FTIDKCLDVDDEGRMELQ 2458 >SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 681 Score = 26.6 bits (56), Expect = 7.7 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%) Query: 165 EIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSN 220 +IEN +SK + + S+R+ RPRSR +S + +ENS K + +S N Sbjct: 520 KIENDNSKSNDYL-----SVRNTRPRSRS-LNSLVGNKSENSSSSKAKSESKSQGN 569 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.133 0.403 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,284,602 Number of Sequences: 5004 Number of extensions: 98589 Number of successful extensions: 430 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 354 Number of HSP's gapped (non-prelim): 71 length of query: 481 length of database: 2,362,478 effective HSP length: 75 effective length of query: 406 effective length of database: 1,987,178 effective search space: 806794268 effective search space used: 806794268 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 56 (26.6 bits)
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