Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001484-TA|BGIBMGA001484-PA|IPR001607|Zinc finger,
UBP-type, IPR001394|Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2
(481 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 96 1e-20
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 84 4e-17
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 83 6e-17
SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase Ubp1|Schizos... 73 7e-14
SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase Ubp9|Schizosac... 71 3e-13
SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase Ubp4|Schizos... 68 3e-12
SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase Ub... 64 3e-11
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 64 4e-11
SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase Ubp14|Sch... 62 1e-10
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 52 1e-07
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 52 2e-07
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 45 2e-05
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 45 3e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 43 8e-05
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 36 0.009
SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase Ubp11|Schizo... 36 0.017
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 33 0.088
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 31 0.47
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 0.62
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 30 0.82
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.82
SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces pom... 29 1.4
SPAC23C11.12 |hcn1||anaphase-promoting complex subunit Hcn1|Schi... 29 1.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.9
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 28 2.5
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 28 2.5
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 2.5
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 28 3.3
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 3.3
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 27 4.4
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 27 4.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.4
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 27 5.8
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 27 7.7
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 27 7.7
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 95.9 bits (228), Expect = 1e-20
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 328 VALSDCLASFVQVEELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFR 387
+ L+DCL F + E+L + + ++ +KQ I R P +L HLKRF FR
Sbjct: 825 ITLNDCLDEFEKTEQLGEEDPWYCPTCKEFRQASKQMEIWRCPEILIFHLKRFSSERRFR 884
Query: 388 TKVDTSISFPLRALDVSRFVRDVRRAEHD--ALLYDLAAVIVHHGSGAGSGHYTAFAINE 445
K+D + FP+ LD+S + +E + L+Y+L AV H+G G G GHYTAFA N
Sbjct: 885 DKIDDLVEFPIDNLDMSMRTGSYKLSEKENPKLIYELYAVDNHYG-GLGGGHYTAFAKNP 943
Query: 446 E--QWFHFNDHTVRAADSHAVASCKPYILFYIRR 477
+ Q++ F+D V + Y+LFY R+
Sbjct: 944 DNGQFYCFDDSRVTPVCPEETVTSAAYLLFYRRK 977
Score = 43.6 bits (98), Expect = 6e-05
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 207 LQINRKDKKRSPSNGKLQREKKV---VGLKNLGNTCFMNAVLQSLNNIQEFSCYF 258
LQ + + SN + ++EK+V GL NLGNTC+MN+ LQ L + +E +F
Sbjct: 285 LQFLIQQRNNQSSNEEQKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFF 339
Score = 31.1 bits (67), Expect = 0.36
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 298 CLACGTESKKYDPFLDLSLELP 319
C C T S +DPF+DL+L LP
Sbjct: 473 CPVCNTVSITFDPFMDLTLPLP 494
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 84.2 bits (199), Expect = 4e-17
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 296 VRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXXXX 355
V CL C E DP +D+SL++ E L CL FV E++ +
Sbjct: 273 VTCLDCKKERVAVDPLMDISLDINEP-------TLQGCLERFVSKEKVQ-----YSCHSC 320
Query: 356 XXXXXTKQFWIRRLPNVLCLHLKRFRWHNY-FRTKVDTSISFPLRALDVSRFVRDVRRAE 414
KQ +LP +C+ LKRF +N+ TK+D +S+P F+R
Sbjct: 321 GSKNAIKQLVFDKLPPTICMQLKRFEQNNFAMSTKIDKQVSYPA-------FLRMRYNFN 373
Query: 415 HDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQWFHFNDHTVRAADSHAVASCKPYILFY 474
D + Y L +V+ H G+ +GHY A+ + QWF +D T+ V + + Y+LFY
Sbjct: 374 QDDVDYQLYSVVCHKGT-LDTGHYIAYTYYQNQWFLLDDTTIVEVKESEVLNSQAYLLFY 432
Query: 475 IRREL 479
R++
Sbjct: 433 HERQI 437
Score = 34.7 bits (76), Expect = 0.029
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 28 CSECS-VPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDDYI 85
CS C + +++ CL C V C H + HA H + + YC+ C DY+
Sbjct: 38 CSTCKRINKRSIRCLSCHSVGC--LWGHHGEEHAMEHTHMIGVDVKNGHTYCFGCQDYV 94
Score = 31.1 bits (67), Expect = 0.36
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 231 GLKNLGNTCFMNAVLQSL 248
G++NLG TCFM+ +LQS+
Sbjct: 146 GIQNLGATCFMSVILQSI 163
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 83.4 bits (197), Expect = 6e-17
Identities = 54/188 (28%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 294 RKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXX 353
+++ C C S Y LDLS++ +L+D L FV E+L +Y
Sbjct: 257 QQILCSVCKKPSNTYQALLDLSVDAKGS-------SLADSLKHFVHAEKLTKQNKYRCEN 309
Query: 354 XXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRDVRRA 413
+KQ I R PN+L +H KRF ++ + +K+ IS+P + ++ ++ D
Sbjct: 310 CKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYP-ESFNLGPYMSD---- 364
Query: 414 EHDALLYDLAAVIVHHGSGAGSGHYTAFAINEE-QWFHFNDHTVRAADSHAVASCKPYIL 472
+ + Y+L V+VH G SGHY +F + W F+D V + V + + YIL
Sbjct: 365 PNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYIL 424
Query: 473 FYIRRELS 480
Y R+ S
Sbjct: 425 QYKRKSTS 432
Score = 34.3 bits (75), Expect = 0.038
Identities = 14/16 (87%), Positives = 15/16 (93%)
Query: 231 GLKNLGNTCFMNAVLQ 246
GL NLGNTCFMN+VLQ
Sbjct: 126 GLVNLGNTCFMNSVLQ 141
>SPCC16A11.12c |ubp1||ubiquitin C-terminal hydrolase
Ubp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 849
Score = 73.3 bits (172), Expect = 7e-14
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 328 VALSDCLASFVQVEELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHN--- 384
+ L DCL F + E+L + ++ TK+ I RLP +L +HL RF H
Sbjct: 690 ITLEDCLLEFSKPEQLDLQDSWYCPGCKAFRPATKRLEIWRLPKILVIHLNRFSGHGGDL 749
Query: 385 YFRTKVDTSISFPLRALD----VSRFVRDVR-RAEHDALLYDLAAVIVHHGSGAGSGHYT 439
R K + +P+ L+ +S F++D + ++LYDL AV HHG +GHYT
Sbjct: 750 RRRRKRRDLVVYPVFDLNLKQFLSPFIKDHEWLSSQKSMLYDLYAVDNHHGF-MSNGHYT 808
Query: 440 AFA--INEEQWFHFNDHTVRAADSHAVASCKPYILFY 474
A+A + + +F F+D + D + + Y+LFY
Sbjct: 809 AYARDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFY 845
Score = 37.9 bits (84), Expect = 0.003
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 213 DKKRSPSNGKLQREKKVVGLKNLGNTCFMNAVLQSLNNIQEFSCYF 258
D N + +E + GL NLGN+C+MN+ LQ + + E + YF
Sbjct: 262 DSITKEQNLTINKEIGLCGLYNLGNSCYMNSALQCMIHTHELTKYF 307
>SPBC1703.12 |ubp9||ubiquitin C-terminal hydrolase
Ubp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 585
Score = 71.3 bits (167), Expect = 3e-13
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 295 KVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXXX 354
+ +CL C + + + FLDLS+++ N T V + CL SF E L+ ++
Sbjct: 241 ETKCLTCENITSRDESFLDLSIDI----ENHTSV--TSCLRSFSASEMLSSKNKFHCDVC 294
Query: 355 XXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRDVRRAE 414
K+ I++LP +L LHLKRF+++ + + + + + R AE
Sbjct: 295 KSLQEAEKRMKIKKLPKILSLHLKRFKYNE--TQEGHDKLFYTIVFTNEMRLFTTTEDAE 352
Query: 415 HDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQ-WFHFNDHTV 456
+ +Y L++VIVH G G GHY + + W F+D V
Sbjct: 353 NAERMYYLSSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENV 395
Score = 33.9 bits (74), Expect = 0.051
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 231 GLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMKANGRKV 273
GL N GNTC++++VL SL +++ F N P N + V
Sbjct: 42 GLTNYGNTCYVSSVLVSLYHLKPFRDSLNSYPLPSAPPNFKSV 84
>SPBC18H10.08c |ubp4||ubiquitin C-terminal hydrolase
Ubp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 67.7 bits (158), Expect = 3e-12
Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 15/212 (7%)
Query: 275 HSRSYTRQEMNDVVMAEELRKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCL 334
H RS +N+ V + + +C+ CG S + PF L++ + +V V+L +CL
Sbjct: 217 HLRSNKSIVVNNFV-GQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSH---VVSLQECL 272
Query: 335 ASFVQVEELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDT-- 392
F E L + + K I +LP L + ++RF+ R K+DT
Sbjct: 273 LKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRKKIDTPL 332
Query: 393 --SISFPLRALDVSRFVRDVRRAEHDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQWFH 450
S+ P + L F + + Y+L A I H+G +GHY + + +W H
Sbjct: 333 GLSLQIPSKMLVPPSFQSGIGYIPSN---YNLFAFICHYGQ-LENGHYISDVLFNNEWCH 388
Query: 451 FNDHTVRAADSHAVAS---CKPYILFYIRREL 479
+D VR YILFY R L
Sbjct: 389 IDDSIVRTVGGITDLREDFSSSYILFYKRSSL 420
Score = 36.3 bits (80), Expect = 0.009
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
Query: 230 VGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLE 265
+GL NLGNTC+MN VLQ L F+C +P L+
Sbjct: 72 IGLTNLGNTCYMNCVLQCL-----FACKDLTIPMLQ 102
>SPBC713.02c |ubp21|ubpD, ubp15|ubiquitin C-terminal hydrolase
Ubp21|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1129
Score = 64.5 bits (150), Expect = 3e-11
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 24/242 (9%)
Query: 223 LQREKKVVGLKNLGNTCFMNAVLQSL-NNIQEFSCYFNQLPSLEMKANGRKVYHSRSYTR 281
L+++++ V L + N+ + ++IQEF+ +LE K G +V ++
Sbjct: 283 LEKQREPVSTTELTRSFGWNSFDSFMQHDIQEFNRVLQD--NLEKKMKGTEVENA----- 335
Query: 282 QEMNDVVMAEELRKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVE 341
+ND+ + + V+C+ ES + + F D+ L + + DT L D +QVE
Sbjct: 336 --LNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGM---DT---LEDSFRDAIQVE 387
Query: 342 ELADTERYFXXXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWH--NYFRTKVDTSISFPLR 399
L +Y+ K LPNVL L LKRF + K++ FPL
Sbjct: 388 TLTGDNKYYAEGHGLQDAH-KGIIFESLPNVLQLQLKRFDYDMLRDMMVKINDRHEFPLE 446
Query: 400 ALDVSRFVRDVRRAEHDALLYDLAAVIVHHGSGAGSGHYTAFAINEE--QWFHFNDHTVR 457
+D+ ++ + + ++ +Y L V+VH G G GHY A E+ WF F+D V
Sbjct: 447 -IDLEPYLSET-ADKSESHVYVLHGVLVHGGDLHG-GHYYALIKPEKDSNWFKFDDDRVT 503
Query: 458 AA 459
A
Sbjct: 504 RA 505
Score = 35.9 bits (79), Expect = 0.013
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 220 NGKLQREKKVVGLKNLGNTCFMNAVLQSL 248
N ++E VGLKN G TC+MN++LQSL
Sbjct: 220 NYNSKKETGYVGLKNQGATCYMNSLLQSL 248
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 64.1 bits (149), Expect = 4e-11
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 361 TKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTS-ISFPLR-ALDVSRFVRDVRRAEHDAL 418
TKQ +I LP VL LHLKRF + T+ + I++P R ++ + F VR + H
Sbjct: 377 TKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSIPQNVFSPSVRGSIHPE- 435
Query: 419 LYDLAAVIVHHGSGAGSGHYTAFA--INEEQWFHFNDHTVRAADSHAV 464
YDL AV+ HHG+ A GHYT +++ WF +D + H V
Sbjct: 436 -YDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDV 482
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Query: 231 GLKNLGNTCFMNAVLQSL 248
G N GN CFMN++LQ+L
Sbjct: 134 GFINTGNICFMNSILQAL 151
>SPBC6B1.06c |ubp14|ucp2|ubiquitin C-terminal hydrolase
Ubp14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 20/95 (21%)
Query: 3 CEHLLDNVKLEQIKVEDTKITK--NFSCSECSVPEQNWLCLHCGVVNCGRYV------NG 54
C+H+++ + +T +T N +CS+C + E W+CL CG ++CGR NG
Sbjct: 153 CDHIIN------LPENETYVTNLDNATCSKCDLAENLWMCLTCGALSCGRKQYGGGGGNG 206
Query: 55 HAKNHADTLGHQLCISCDAYS------VYCYKCDD 83
HA +H D GH L + + S +YCY CD+
Sbjct: 207 HALSHYDDTGHPLAVKLKSISPDGQADIYCYSCDE 241
Score = 43.2 bits (97), Expect = 8e-05
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 420 YDLAAVIVHHGSGAGSGHYTAFAINE----EQWFHFNDHTVRAADSHAVASCKPYILFYI 475
Y+L A+I H GS A +GHY AF E +QW FND V S A Y+ +
Sbjct: 713 YNLKAIISHKGSSAHAGHYVAFIRKEIDGKQQWVLFNDEKVLQVASLEEAKTTGYVYLFE 772
Query: 476 R 476
R
Sbjct: 773 R 773
Score = 37.5 bits (83), Expect = 0.004
Identities = 14/29 (48%), Positives = 24/29 (82%)
Query: 229 VVGLKNLGNTCFMNAVLQSLNNIQEFSCY 257
+ GLKNLGN+C++ + +QSL +I+EF+ +
Sbjct: 299 LTGLKNLGNSCYLASTMQSLFSIKEFAIH 327
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 52.4 bits (120), Expect = 1e-07
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 28 CSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDDYI 85
C+ C + W+CL CG + CGRY + HAK H H + + V+ Y D+Y+
Sbjct: 262 CTVCCYDKDLWICLICGNIGCGRYHDAHAKQHYVDTAHCYAMELETQRVWDYAGDNYV 319
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 51.6 bits (118), Expect = 2e-07
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 13/175 (7%)
Query: 310 PFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADT-ERYFXXXXXXXXXXTKQFWIRR 368
PFL L+L+LP P+ + + + EL + +Y ++F +
Sbjct: 331 PFLYLTLDLPP-----KPIFQDEFEGNIIPQVELKEILNKYNGVHTQELAGMRRRFHLMT 385
Query: 369 LPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRD--VRRAEHDALLYDLAAVI 426
P H+KRF +NYF + T ++FPL D+S F+ D ++ + Y+L A I
Sbjct: 386 APPYFIFHIKRFMKNNYFTERNQTIVTFPLDDFDMSPFIDDSFIQSNPKISTKYNLVANI 445
Query: 427 VHHGSGAGSGHYTAFAI-----NEEQWFHFNDHTVRAADSHAVASCKPYILFYIR 476
+H + F I + +W+ D V S + + +I + R
Sbjct: 446 IHESVTHAEEEFHNFRIQIRNPSTNKWYQIQDLYVEEISSDMIRLGESFIQLWER 500
Score = 31.5 bits (68), Expect = 0.27
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 31 CSVPEQN---WLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVY 77
CSV N + CL CG GR + HA HA T H + ++C Y
Sbjct: 77 CSVSLTNLSVYACLVCGRYFQGRGPSSHAYFHALTENHHVFVNCSTLKFY 126
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 45.2 bits (102), Expect = 2e-05
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 296 VRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSDCLASFVQVEELADTERYFXXXXX 355
+ C+ ES + + + D+ L + + +N L D S++QVE L YF
Sbjct: 331 IACVNVNFESARSEDYWDIQLNVKGM-KN-----LEDSFRSYIQVETLEGDNCYF-ADTY 383
Query: 356 XXXXXTKQFWIRRLPNVLCLHLKRFRW--HNYFRTKVDTSISFPLRALDVSRFVRDVRRA 413
K P +L L LKRF + K++ FPL D F+
Sbjct: 384 GFQEAKKGVIFESFPPILHLQLKRFEYDFERDMMIKINDRYEFPLE-FDAKAFL-SPEAD 441
Query: 414 EHDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQ--WFHFNDHTVRAA 459
+ Y L V+VH G +GHY A E+ W+ ++D V A
Sbjct: 442 QSQNCEYVLYGVLVHSGD-LHNGHYYALLKTEKDGPWYKYDDTRVTRA 488
Score = 43.6 bits (98), Expect = 6e-05
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 230 VGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMKANGRKVYHSRS--YTRQEMNDV 287
VGLKN G TC+MN++LQSL I F Q+P+ + Y + Y Q MN+
Sbjct: 213 VGLKNQGATCYMNSLLQSLYIIHAFRRIVYQIPTDSPQGKDSIAYALQRCFYNLQFMNEP 272
Query: 288 VMAEELRK 295
V EL K
Sbjct: 273 VSTTELTK 280
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 44.8 bits (101), Expect = 3e-05
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 2 ECEHLLDNVKLEQIK-----VEDTKITKNFSCSECSVPEQNW---LCLHCGVVNCGRYVN 53
EC HL VKL +K + D F C+ + +++ LC +CG + C + +
Sbjct: 55 ECSHLKKGVKLSHLKGNARALRDPSKHLCFICTTEKIKREDYELTLCANCGYLFCCNHES 114
Query: 54 GHAKNHAD-TLGHQLCISCDAYSVYCYKCD-DYIINDTEN 91
H++ H + H + ++ +CY CD D +I D +N
Sbjct: 115 DHSRKHFEKNKKHCVFVNIITLKCHCYSCDADIVIFDKKN 154
Score = 43.2 bits (97), Expect = 8e-05
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 211 RKDKKRSPSNGKLQREKKVV--GLKNLGNTCFMNAVLQSL 248
+K+KK S+GK ++ KV+ GLKNLG TCF N+ LQ L
Sbjct: 187 KKEKKSKHSSGKSSKKYKVISPGLKNLGATCFFNSTLQVL 226
Score = 39.5 bits (88), Expect = 0.001
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 31/136 (22%)
Query: 369 LPNVLCLHLKRFRW---HNYFRT--KVDTSISFPLRALDVSRFVRDVRRAEHDALLYDLA 423
LP V +HLKRF H+ + K+ I F + LD++ FV RA + Y L
Sbjct: 742 LPPVFIIHLKRFFQEISHDGYANPKKISDFIEFE-QELDLNEFVMPHLRAS-SSFRYRLF 799
Query: 424 AVIVHHGSGAGSGHYTAFAIN-----------------------EEQWFHFNDHTVRAAD 460
VIVH G+ GHY A+ ++ E +W + +D+ VR +
Sbjct: 800 GVIVHSGT-LNYGHYVAYVLSHKFLDLSAPSTNSKDFRSEAGIPERRWLYISDNIVRESS 858
Query: 461 SHAVASCKPYILFYIR 476
V+ + Y+LFY R
Sbjct: 859 WDEVSKVEAYMLFYER 874
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 43.2 bits (97), Expect = 8e-05
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 419 LYDLAAVIVHHGSGAGSGHYTAF---AINEEQWFHFNDHTV 456
LYDL V+ H G+ A SGHY A+ + N +WF FND V
Sbjct: 396 LYDLVGVLSHAGASASSGHYQAWIRNSNNRAEWFRFNDAKV 436
Score = 35.9 bits (79), Expect = 0.013
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 231 GLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPS 263
GL NLGNTC+MN+ +Q L I E S +Q S
Sbjct: 101 GLINLGNTCYMNSTVQMLRAIPELSDAVSQFNS 133
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 36.3 bits (80), Expect = 0.009
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 420 YDLAAVIVHHGSGAGSGHYTAFAINEEQ--WFHFNDHTVRAADSHAV------ASCKPYI 471
YDL AV VH G A GHY + + E + +ND V D + + PY+
Sbjct: 1060 YDLLAVFVHRGQ-ASFGHYWTYIHDFENNVYRKYNDEYVTVVDESEIFADTTGNNANPYM 1118
Query: 472 LFYIRRE 478
L YIR+E
Sbjct: 1119 LTYIRKE 1125
Score = 27.9 bits (59), Expect = 3.3
Identities = 8/17 (47%), Positives = 15/17 (88%)
Query: 230 VGLKNLGNTCFMNAVLQ 246
+GL+N GN C++N+++Q
Sbjct: 614 IGLENTGNLCYLNSLIQ 630
>SPBC19C2.04c |ubp11||ubiquitin C-terminal hydrolase
Ubp11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 35.5 bits (78), Expect = 0.017
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 217 SPSNGK-LQREKKVVGLKNL-GNTCFMNAVLQSL 248
SPS GK L + + GL N+ GN CF+N VLQSL
Sbjct: 35 SPSTGKRLVKNASIKGLYNVSGNDCFLNCVLQSL 68
Score = 35.5 bits (78), Expect = 0.017
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 16/191 (8%)
Query: 294 RKVRCLACGTESKKYDPFLDLSLELP-EVGRNDTPVALSDCLASFVQ-VEELADTERYFX 351
+KV+C C S Y + L LP E N LS A Q + + +
Sbjct: 170 QKVQCCQCLAISISYSTATSIQLCLPPEYSGNSNVSLLSLMEADREQHISDYKCDSCFKS 229
Query: 352 XXXXXXXXXTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLRALDVSRFVRDVR 411
+ + P +L + L+R + T+ + SISFP + + ++
Sbjct: 230 SPKHSKTSCIRTVDWKNPPTILQIQLERTSYTCQGLTRNNVSISFPSKLI--------LK 281
Query: 412 RAEHDALLYDLAAVIVHHGSGAGSGHYTAFAINEEQWFHFNDHTV-RAADSHAVASCKPY 470
H Y L ++I H GS GHY + + ++ W+ ND + +++ + A++ +
Sbjct: 282 NKHH----YILRSLITHSGS-VTYGHYLCYRLQDDIWWKANDSLITKSSLNEALSQTRSA 336
Query: 471 ILFYIRRELSL 481
L + E L
Sbjct: 337 CLLFYEMESPL 347
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 33.1 bits (72), Expect = 0.088
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 143 LNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSS 202
L I + P++ L E E +++ + I+ T ES+ + R + S+ SSS
Sbjct: 352 LQTIRRGMRYCPSNFVLHVRYAEHEEANNRTSE-IRSTYESLIAALAREISQLDSKASSS 410
Query: 203 TENSLQINRKDKKRSPSNGKLQREKKVVGLKNLGNTCFMNAV 244
+E+S N ++KK P + ++R+ ++V +L C +NA+
Sbjct: 411 SESSTDGNPQEKK-LPEH-LVKRKSRLVRQYSLAWCCLINAI 450
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 30.7 bits (66), Expect = 0.47
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 111 QNSREKQEDSRQDEDDCDANIPGLVTAPDDIVL---NVIEGDIAVQPTSSSL----DPHS 163
+ REK RQD A I + T D++VL N+++ + +Q SL + S
Sbjct: 1758 EEEREKNLRIRQDNRHMHAEIGDIRTKFDELVLEKTNLLKENSILQADLQSLSRVNNSSS 1817
Query: 164 TEIENCDSKLDKC------IKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRS 217
T +N S+L ++ +++R + + + + E S Q+N+K +
Sbjct: 1818 TAQQNAQSQLLSLTAQLQEVREANQTLRKDQDTLLRENRNLERKLHEVSEQLNKKFDSSA 1877
Query: 218 PSNGKLQREKKVVGLK-NLG-NTCFMNAVLQSLNNIQEFS 255
+++ EK+V+ LK NL ++++++ + I+ F+
Sbjct: 1878 RPFDEIEMEKEVLTLKSNLAQKDDLLSSLVERIKQIEMFA 1917
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.62
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 109 EKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIEN 168
EK +S + S D+ D++ ++ +D + D + +S D S+ +
Sbjct: 94 EKAHSSSEASGSGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS---S 150
Query: 169 CDSKLDKCIKGTEESIRSLRPRSRKRTHSEDS--SSTENSLQINRKDKKRSPSNGKLQRE 226
DS+ + +G++ S S S + DS SS+++ + + +D S S+ + E
Sbjct: 151 SDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESE 210
Query: 227 KKVVG 231
G
Sbjct: 211 SSSEG 215
Score = 30.3 bits (65), Expect = 0.62
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 88 DTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPG------LVTAPDDI 141
D++++ +D NS + ++DS D D ++ ++ D
Sbjct: 251 DSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDS 310
Query: 142 VLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSS 201
+ +G+ T+S + + S+ +K + S + +S KR H +D S
Sbjct: 311 SSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSS--KIHDKSLKRKHEDDES 368
Query: 202 ST 203
ST
Sbjct: 369 ST 370
Score = 29.9 bits (64), Expect = 0.82
Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 1/135 (0%)
Query: 94 DKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQ 153
D ND +S + + +S ++ D ++ + + + +
Sbjct: 113 DSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE 172
Query: 154 PTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKD 213
SSS D S+ + DS+ + + ++ S S S + DSSS+ +S +
Sbjct: 173 SESSSEDNDSSS-SSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSS 231
Query: 214 KKRSPSNGKLQREKK 228
+ S+ E +
Sbjct: 232 EDNDSSSSSSDSESE 246
Score = 27.1 bits (57), Expect = 5.8
Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 3/141 (2%)
Query: 88 DTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIE 147
D +++ +D +S + + +S + D ++ + +
Sbjct: 125 DNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSS 184
Query: 148 GDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDS--SSTEN 205
+ SSS D S+ + DS+ + +G++ S S S + DS SS+++
Sbjct: 185 SSSDSESESSSEDSDSSS-SSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDS 243
Query: 206 SLQINRKDKKRSPSNGKLQRE 226
+ + +D S S+ + E
Sbjct: 244 ESESSSEDSDSSSSSSDSESE 264
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 29.9 bits (64), Expect = 0.82
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 133 GLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSR 192
G+V P +V ++A QP +S P T + + + + I + PR +
Sbjct: 760 GVVQQPYQTQPSVTNNNVATQPVIASTVPVQTAAPSSQTAVPQTI----HQSNAFTPRGK 815
Query: 193 KRTHSEDSSSTENSLQINRKDKKRSPSN 220
+ S +S S+ S Q D+ RS +N
Sbjct: 816 HASGSRNSISSTKSPQHKLSDQPRSRNN 843
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.9 bits (64), Expect = 0.82
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 152 VQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINR 211
++ SSL E + K+++ +E L ++K + E + S ENS N
Sbjct: 568 IKSLESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKK--YQELAISFENS---NV 622
Query: 212 KDKKRSPSNG----KLQREKKVVGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMK 267
K + P NG L+ E + + LKNL ++ LQ + F FNQL +
Sbjct: 623 KTQSVEPDNGLSLEALKNENQTL-LKNLEDSTARYEHLQ-----KSFKNVFNQLRKQQPS 676
Query: 268 ANGRKVYHSRSYTRQEMN 285
+GR SRS + E+N
Sbjct: 677 NHGRNSSVSRSSSSVEVN 694
>SPAC17H9.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 601
Score = 29.1 bits (62), Expect = 1.4
Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 12/188 (6%)
Query: 109 EKQNSREKQEDSRQDEDDCDANIPG----LVTAPDDIVLNVIEGDIAVQPTSSSLDPHST 164
E SR+K++ D +D D IP +T + N++ D + S S +
Sbjct: 193 ENMGSRKKRKGFVIDSEDSDTGIPREENVTITRKTKLSSNILYSDSDTERQSDSGSKNVA 252
Query: 165 EIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNGKLQ 224
+ + K + + E S P + + EN ++ ++ + P +
Sbjct: 253 RQFSRIKRKRKVLSSSSEDDESSSPEDLLKPIIRSTEEMENLNELEQEVQDLDPIDEGF- 311
Query: 225 REKKVVGLKNLGNTCFMNAVLQSLNNIQEFSCYFNQLPSLEMKANGRKVYHSRSYTRQEM 284
E+KV +N F L SL N +++L SL + + + S E
Sbjct: 312 -EEKVPRFRNPSKKAFYEK-LHSLRNRS-----YSKLESLTSEKSDTLITKSELANESEE 364
Query: 285 NDVVMAEE 292
+D ++ +E
Sbjct: 365 DDFIVDDE 372
>SPAC23C11.12 |hcn1||anaphase-promoting complex subunit
Hcn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 80
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 177 IKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNGKLQREKKV 229
I+ T E + + ++T + S+TE +LQ N + + SP K+ RE+++
Sbjct: 9 IQITAEDVLAYDEEKLRQT-LDSESTTEEALQKNEESTRLSPEKKKIIRERRI 60
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 1.9
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 108 DEKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIE 167
+EK+ S + S + E++ +A + + + + + + S S S E E
Sbjct: 131 EEKKESSSESSSSSESEEEEEAVVK--IEEKKESSSDSSSESSSSESESESSSSESEEEE 188
Query: 168 NCDSKLDKCIKGTEESIRSLRPRSRKRTHS--EDSSSTENSLQINRKDKKRSPSNGKLQR 225
K ++ +G+ ES S + S DSSS S + +KKR +R
Sbjct: 189 EVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASEER 248
Query: 226 EKKV 229
K+
Sbjct: 249 PAKI 252
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.3 bits (60), Expect = 2.5
Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 18/236 (7%)
Query: 111 QNSREKQEDSRQDEDDCDANIPGLVTAPDDIV-LNVIEG------DI--AVQPTSSSLDP 161
QN+ E + ++D + + P V LNV + DI AV L
Sbjct: 49 QNNEEVKTSLKEDSSKFHPSASAPIFVPTSSVQLNVSKNNGHKASDIVDAVSSKDEELRK 108
Query: 162 HSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNG 221
H+ + K +E+ L+ + + S S N + +R+ K R P N
Sbjct: 109 HAKGEGKRSKNRKRSSKHSEKQAVDLKSSNSSQETSSSKGSVNNKSERSREAKSRMPKNS 168
Query: 222 KLQREKKVVGLKNLGNTCFMNAVLQSLNNIQEFS-CYFNQLPSLEMKANGR--KVYHSRS 278
K KK + L L T M +++ N + E S C PS + + G V+H
Sbjct: 169 K--EIKKGLDLSKLDMTSRM--IVELKNRLYECSVCTDTINPSTSIWSCGTCYHVFHLSC 224
Query: 279 YTRQEMNDVVMAEE--LRKVRCLACGTESKKYDPFLDLSLELPEVGRNDTPVALSD 332
+ N + E R C + TE+ + E PE +N P + D
Sbjct: 225 IRKWCKNSIEQRNEDAWRCPYCQSNQTETSLHYLCWCGKQEKPEFVKNLVPHSCGD 280
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 28.3 bits (60), Expect = 2.5
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 115 EKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLD 174
EKQED+ DE D +N G D+ ++ ++ D S ++ + D
Sbjct: 1069 EKQEDTSTDESDIKSNKFGFFRVWDNKHISSNHYEVKENVLVDEEDVWSVILKQREK--D 1126
Query: 175 KCIKGTEESIRSLRPRSRKRTH-SEDSSSTENS 206
++ T+E+ + R R+ + H ED + +NS
Sbjct: 1127 AMLEKTDETTSNRRLRAHHKIHYGEDLNIYDNS 1159
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 193 KRTHSEDSSSTENSLQINRKDKKRSPSNGK 222
K+TH+ED S T SL K KK+ + K
Sbjct: 72 KKTHNEDESHTNESLPSTDKKKKKDNDDFK 101
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 158 SLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRS 217
+LDP S+++ ++ + K +S RP++ + T S+ +ST KK S
Sbjct: 146 TLDPDSSQLPTYKTEYSETTKFPLG--KSYRPKASRTTSSQSVASTMTKSSTKTSKKKSS 203
Query: 218 PSNGK 222
N K
Sbjct: 204 KKNSK 208
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 140 DIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSED 199
D + NV I SL+ +EIE+ D K+ C+ +++ SL+ R +D
Sbjct: 668 DAIKNVKTYQIKFSDLQESLEKCRSEIESFDQKITACLDDLQKAQLSLKQFERDHIPLKD 727
Query: 200 SSST 203
T
Sbjct: 728 ELVT 731
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 150 IAVQPTSSSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQI 209
I +Q ++SL P EI +DK I+ T + SLR + K+ E T+ +
Sbjct: 115 IELQALNNSLSP--AEIREKIQSIDKEIEETSSKLESLRNGTVKQISKEAMQKTDKNYDF 172
Query: 210 NRK 212
+K
Sbjct: 173 AKK 175
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 8 DNVKLEQIKVEDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGH 55
D +K++ +K + IT+ C C+ P QN L L+C CG ++ H
Sbjct: 860 DILKIDTLKSFEALITECPIC--CNEPIQNPLLLNCKHACCGDCLSEH 905
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 4.4
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 155 TSSSLDPHSTEIENCDSKLDKCIKGTEES-IRSLRPRSRKRTHSEDSSSTENSLQINRKD 213
TSSS P S+ + S K + S S S K + S SSS +S +
Sbjct: 148 TSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSK 207
Query: 214 KKRSPSNGK 222
SPS+ K
Sbjct: 208 SSASPSSSK 216
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 5.8
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 17/119 (14%)
Query: 117 QEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCDSKLDKC 176
+ED ++E D D + L +D+V + GD + S S D ++E + DS K
Sbjct: 125 EEDEEEEESDEDYD---LSPTEEDLV-ETVSGDEESEEESESEDNSASEEDELDSAPAK- 179
Query: 177 IKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSNGKLQREKKVVGLKNL 235
+ ++ +KRT +D S E + + + K+ G +EKKV + L
Sbjct: 180 ----KAQVK------KKRT--KDESEQEEAASPKKNNTKKQKVEGTPVKEKKVAFAEKL 226
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 26.6 bits (56), Expect = 7.7
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 111 QNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQPTSSSLDPHSTEIENCD 170
+N +++E+ Q E D ++N G + N E D P+SS D S D
Sbjct: 2385 RNHDKRKENGSQGEAD-NSNYSGSLMRRRT---NDQEEDALATPSSSRRDSRSKRASLID 2440
Query: 171 SKLDKCIKGTEESIRSLR 188
+DKC+ +E L+
Sbjct: 2441 FTIDKCLDVDDEGRMELQ 2458
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 26.6 bits (56), Expect = 7.7
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 165 EIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQINRKDKKRSPSN 220
+IEN +SK + + S+R+ RPRSR +S + +ENS K + +S N
Sbjct: 520 KIENDNSKSNDYL-----SVRNTRPRSRS-LNSLVGNKSENSSSSKAKSESKSQGN 569
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,284,602
Number of Sequences: 5004
Number of extensions: 98589
Number of successful extensions: 430
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 354
Number of HSP's gapped (non-prelim): 71
length of query: 481
length of database: 2,362,478
effective HSP length: 75
effective length of query: 406
effective length of database: 1,987,178
effective search space: 806794268
effective search space used: 806794268
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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