Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001484-TA|BGIBMGA001484-PA|IPR001607|Zinc finger,
UBP-type, IPR001394|Peptidase C19, ubiquitin carboxyl-terminal
hydrolase 2
(481 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 30 0.049
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 27 0.26
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 26 0.80
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 25 1.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 1.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 25 1.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 1.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 25 1.9
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 4.3
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 29.9 bits (64), Expect = 0.049
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 4/130 (3%)
Query: 185 RSLRPR-SRKRTHSEDSSSTENSLQINR---KDKKRSPSNGKLQREKKVVGLKNLGNTCF 240
R+ R R SR R + S ENS + R K++ R + + +E+K++ +
Sbjct: 266 RTSRKRYSRSREREQKSYKNENSYRKYRETSKERSRDRTERERSKERKIISSLSNNYNYN 325
Query: 241 MNAVLQSLNNIQEFSCYFNQLPSLEMKANGRKVYHSRSYTRQEMNDVVMAEELRKVRCLA 300
N + NN + Y N + ++E VY+ R + M E++ + R +
Sbjct: 326 NNNYKYNYNNYNKKLYYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQEQIPRFRYIG 385
Query: 301 CGTESKKYDP 310
T ++ P
Sbjct: 386 PPTPFPRFIP 395
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.5 bits (58), Expect = 0.26
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 165 EIENCDSKLDKCIKGTEESI--RSLRPR-SRKRTHSEDSSSTENSLQINRK-DKKRSPSN 220
E + D + +K E+ + R+ R R SR R ++S E + R+ K+RS
Sbjct: 233 EYKEKDRRYEKLHNEKEKLLEERTSRKRYSRSREREQNSYKNEREYRKYRETSKERSRDR 292
Query: 221 GKLQREKKVVGLKNLGNTCFMNAVLQSLNNIQEFSCYFN 259
+ +R K+ + +L N+C + + NN ++ Y+N
Sbjct: 293 RERERSKEPKIISSLSNSCNYSNNYYNNNNYKKL--YYN 329
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.8 bits (54), Expect = 0.80
Identities = 9/12 (75%), Positives = 11/12 (91%)
Query: 160 DPHSTEIENCDS 171
D HST+I+NCDS
Sbjct: 317 DHHSTDIQNCDS 328
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 25.4 bits (53), Expect = 1.1
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Query: 157 SSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSLQI--NRKDK 214
+ ++ H T + K K S SLR R+ H+ S E S NR+ K
Sbjct: 187 NKIEEHDTVLVVNIEKSGNESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYK 246
Query: 215 KRSPSNGKLQREKK 228
K+ KL EKK
Sbjct: 247 KKDRRYEKLHNEKK 260
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 1.4
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 157 SSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSL--QINRKDK 214
+ ++ H T + K K K S SLR R+ H+ S E S NR+ +
Sbjct: 176 NKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYR 235
Query: 215 KRSPSNGKLQREKK 228
K+ KL EK+
Sbjct: 236 KKDRQYEKLHNEKE 249
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 25.0 bits (52), Expect = 1.4
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 157 SSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSL--QINRKDK 214
+ ++ H T + K K K S SLR R+ H+ S E S NR+ +
Sbjct: 187 NKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYR 246
Query: 215 KRSPSNGKLQREKK 228
K+ KL EK+
Sbjct: 247 KKDRQYEKLHNEKE 260
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 1.4
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 157 SSLDPHSTEIENCDSKLDKCIKGTEESIRSLRPRSRKRTHSEDSSSTENSL--QINRKDK 214
+ ++ H T + K K K S SLR R+ H+ S E S NR+ +
Sbjct: 176 NKIEEHDTVLVVNIEKSGKESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYR 235
Query: 215 KRSPSNGKLQREKK 228
K+ KL EK+
Sbjct: 236 KKDRQYEKLHNEKE 249
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.6 bits (51), Expect = 1.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 265 EMKANGRKVYHSRSYTRQEMNDVVMAEELRKVRCLACGTESKKYDPFLDLSLE 317
E+ NG K+ SR+ Q++ + + E+ K+ G S K+D L L E
Sbjct: 1528 EVFVNGEKIVVSRNKAYQKVEENEIIFEIYKMGDRFIGLTSDKFDVSLALDGE 1580
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.4 bits (48), Expect = 4.3
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 48 CGRYVNGHAKN------HADT--LGHQLCISCDAYSVYCYKCDDYIINDTENNIDKXXXX 99
CGRY N +A N +AD +Q + +A + +D ND + N ++
Sbjct: 419 CGRYHNQNAGNQNADNQNADNQNANNQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDN 478
Query: 100 XXXXXXXNDEKQNSREKQEDSRQDEDDCDAN 130
ND KQN +Q ++Q+++ + N
Sbjct: 479 KQNGNRQNDNKQNG-NRQNGNKQNDNKQNGN 508
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,997
Number of Sequences: 429
Number of extensions: 6035
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 10
length of query: 481
length of database: 140,377
effective HSP length: 60
effective length of query: 421
effective length of database: 114,637
effective search space: 48262177
effective search space used: 48262177
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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