Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001483-TA|BGIBMGA001483-PA|IPR001210|Ribosomal protein
S17e
(139 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 176 2e-44
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 176 2e-44
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 176 2e-44
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 176 2e-44
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 176 2e-44
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 176 2e-44
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 176 2e-44
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 176 2e-44
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 176 2e-44
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 176 2e-44
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 158 5e-39
DQ082728-1|AAZ06433.1| 103|Homo sapiens deltex 2 transcript E p... 30 3.1
DQ010329-1|AAY27263.1| 622|Homo sapiens zinc ion binding protei... 30 3.1
BC018555-1|AAH18555.1| 622|Homo sapiens deltex homolog 2 (Droso... 30 3.1
AK023924-1|BAB14727.1| 622|Homo sapiens protein ( Homo sapiens ... 30 3.1
AC005522-1|AAP21881.1| 410|Homo sapiens unknown protein. 30 3.1
BC128593-1|AAI28594.1| 405|Homo sapiens Unknown (protein for MG... 29 4.1
BC128592-1|AAI28593.1| 312|Homo sapiens Unknown (protein for MG... 29 4.1
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 29 4.1
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 29 4.1
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 29 4.1
M81886-1|AAA58395.1| 906|Homo sapiens glutamate receptor type 1... 29 5.4
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 29 5.4
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 29 5.4
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 29 5.4
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 29 5.4
M64752-1|AAA58613.1| 907|Homo sapiens glutamate receptor subuni... 28 9.5
BC111734-1|AAI11735.1| 906|Homo sapiens glutamate receptor, ion... 28 9.5
AB209094-1|BAD92331.1| 833|Homo sapiens glutamate receptor, ion... 28 9.5
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 176 bits (429), Expect = 2e-44
Identities = 81/106 (76%), Positives = 95/106 (89%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
ERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 77 ERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3.
).
Length = 135
Score = 158 bits (384), Expect = 5e-39
Identities = 72/106 (67%), Positives = 88/106 (83%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYY L DF TNK +C+EIAIIP+K L NK AG+ THLM++++ VRGISIKLQEE
Sbjct: 17 IEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 128
RERRDNYVPE+SAL+ +IIEVDPDTK+MLK+LDF ++ LQ+TQP
Sbjct: 77 VRERRDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
>DQ082728-1|AAZ06433.1| 103|Homo sapiens deltex 2 transcript E
protein.
Length = 103
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 40 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEV 94
+C A PT P +++A + ++RLR V+G + K + E + NY E+
Sbjct: 14 VCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQVIKNYTEEL 68
>DQ010329-1|AAY27263.1| 622|Homo sapiens zinc ion binding protein
protein.
Length = 622
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 40 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEV 94
+C A PT P +++A + ++RLR V+G + K + E + NY E+
Sbjct: 350 VCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQVIKNYTEEL 404
>BC018555-1|AAH18555.1| 622|Homo sapiens deltex homolog 2
(Drosophila) protein.
Length = 622
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 40 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEV 94
+C A PT P +++A + ++RLR V+G + K + E + NY E+
Sbjct: 350 VCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQVIKNYTEEL 404
>AK023924-1|BAB14727.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ13862 fis, clone THYRO1001120, moderately
similar to Homo sapiens deltex (Dx) mRNA. ).
Length = 622
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 40 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEV 94
+C A PT P +++A + ++RLR V+G + K + E + NY E+
Sbjct: 350 VCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQVIKNYTEEL 404
>AC005522-1|AAP21881.1| 410|Homo sapiens unknown protein.
Length = 410
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 40 ICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEV 94
+C A PT P +++A + ++RLR V+G + K + E + NY E+
Sbjct: 350 VCLSRAPQPTSPPASRLASKSHGSVKRLRKMSVKGATPKPEPEPEQVIKNYTEEL 404
>BC128593-1|AAI28594.1| 405|Homo sapiens Unknown (protein for
MGC:157808) protein.
Length = 405
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 80 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 116
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens Unknown (protein for
MGC:157807) protein.
Length = 312
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 80 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 116
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 80 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 116
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 80 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 116
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 80 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 116
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>M81886-1|AAA58395.1| 906|Homo sapiens glutamate receptor type 1
protein.
Length = 906
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 58 GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDII 102
G + R L+ + G++ +Q E+ RR NY V ++HD I
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDSI 376
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 66 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 111
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 66 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 111
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 66 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 111
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/46 (28%), Positives = 27/46 (58%)
Query: 66 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 111
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>M64752-1|AAA58613.1| 907|Homo sapiens glutamate receptor subunit
protein.
Length = 907
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 58 GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 100
G + R L+ + G++ +Q E+ RR NY V ++HD
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHD 374
>BC111734-1|AAI11735.1| 906|Homo sapiens glutamate receptor,
ionotropic, AMPA 1 protein.
Length = 906
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 58 GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 100
G + R L+ + G++ +Q E+ RR NY V ++HD
Sbjct: 332 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHD 374
>AB209094-1|BAD92331.1| 833|Homo sapiens glutamate receptor,
ionotropic, AMPA 1 variant protein.
Length = 833
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 58 GFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHD 100
G + R L+ + G++ +Q E+ RR NY V ++HD
Sbjct: 259 GQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHD 301
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.138 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,358,457
Number of Sequences: 224733
Number of extensions: 645435
Number of successful extensions: 1879
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1850
Number of HSP's gapped (non-prelim): 29
length of query: 139
length of database: 73,234,838
effective HSP length: 83
effective length of query: 56
effective length of database: 54,581,999
effective search space: 3056591944
effective search space used: 3056591944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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