Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001483-TA|BGIBMGA001483-PA|IPR001210|Ribosomal protein
S17e
(139 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22142-1|AAA28869.1| 131|Drosophila melanogaster protein ( D.me... 202 1e-52
BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p pro... 202 1e-52
AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal pr... 202 1e-52
AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB... 202 1e-52
AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3... 29 2.3
AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown prot... 29 2.3
AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA ... 29 2.3
AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA... 27 9.1
>M22142-1|AAA28869.1| 131|Drosophila melanogaster protein (
D.melanogaster ribosomalprotein S17 gene, complete cds.
).
Length = 131
Score = 202 bits (493), Expect = 1e-52
Identities = 99/117 (84%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 139
ERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 77 ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>BT001651-1|AAN71406.1| 131|Drosophila melanogaster RE44119p
protein.
Length = 131
Score = 202 bits (493), Expect = 1e-52
Identities = 99/117 (84%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 139
ERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 77 ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AJ271817-3|CAB72251.1| 131|Drosophila melanogaster ribosomal
protein S17 protein.
Length = 131
Score = 202 bits (493), Expect = 1e-52
Identities = 99/117 (84%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 139
ERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 77 ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AE014296-1654|AAF50272.1| 131|Drosophila melanogaster CG3922-PB
protein.
Length = 131
Score = 202 bits (493), Expect = 1e-52
Identities = 99/117 (84%), Positives = 104/117 (88%), Gaps = 2/117 (1%)
Query: 23 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 82
IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17 IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76
Query: 83 ERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQGGYGGRRN 139
ERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 77 ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNTNN--FGRRN 131
>AL138972-11|CAB72294.1| 1212|Drosophila melanogaster EG:BACR25B3.9
protein.
Length = 1212
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 63 LMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDII 102
LM +LR+ + + IS KL EE R+R E+S L +I
Sbjct: 597 LMDQLRNIKSKDISAKLAEERRKRLQLLEQEISDLRRKLI 636
>AF132186-1|AAD34774.1| 1212|Drosophila melanogaster unknown
protein.
Length = 1212
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 63 LMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDII 102
LM +LR+ + + IS KL EE R+R E+S L +I
Sbjct: 597 LMDQLRNIKSKDISAKLAEERRKRLQLLEQEISDLRRKLI 636
>AE014298-417|AAF45793.1| 1212|Drosophila melanogaster CG8590-PA
protein.
Length = 1212
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 63 LMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDII 102
LM +LR+ + + IS KL EE R+R E+S L +I
Sbjct: 597 LMDQLRNIKSKDISAKLAEERRKRLQLLEQEISDLRRKLI 636
>AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA
protein.
Length = 2013
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 42 EEIAIIPTK--PLRNKIAGFATHLMRRLRHSQVRGISI-KLQEEERERRDNYVPEVSALE 98
+E+A + T L+++++ L LR Q++ +I +LQ + E + + ++E
Sbjct: 1122 QEVATLKTSITELQSQVSDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCL----SME 1177
Query: 99 HDIIEVDPDTKDMLKMLD 116
+ E+D DTK ++LD
Sbjct: 1178 VRLAELDEDTKQKQELLD 1195
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.138 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,533,642
Number of Sequences: 52641
Number of extensions: 254867
Number of successful extensions: 882
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 875
Number of HSP's gapped (non-prelim): 8
length of query: 139
length of database: 24,830,863
effective HSP length: 78
effective length of query: 61
effective length of database: 20,724,865
effective search space: 1264216765
effective search space used: 1264216765
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -