BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001482-TA|BGIBMGA001482-PA|undefined (79 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 1.2 SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 24 2.1 SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 24 2.1 SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch... 24 2.8 SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 23 3.7 SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schi... 23 4.8 SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces pom... 23 6.4 SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M... 23 6.4 SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein S12|Schizosa... 23 6.4 SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 22 8.5 SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 22 8.5 SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein S12|Sch... 22 8.5 >SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6 |Schizosaccharomyces pombe|chr 2|||Manual Length = 675 Score = 25.0 bits (52), Expect = 1.2 Identities = 11/47 (23%), Positives = 19/47 (40%) Query: 29 NPWAVKDKDGNVMKTEFPFQCKEGVCVFARNKNTENSTSNEADQSED 75 N W+ K D ++ + C+E + + KN E N +D Sbjct: 108 NEWSKKTNDAQILLNSYETFCEEEALIEEKLKNIEIFEKNFVIMDDD 154 >SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosaccharomyces pombe|chr 1|||Manual Length = 707 Score = 24.2 bits (50), Expect = 2.1 Identities = 8/17 (47%), Positives = 14/17 (82%) Query: 59 NKNTENSTSNEADQSED 75 N+NT++STS +++ ED Sbjct: 101 NENTQDSTSESSEEEED 117 >SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual Length = 632 Score = 24.2 bits (50), Expect = 2.1 Identities = 9/25 (36%), Positives = 15/25 (60%) Query: 20 VQPYILRFWNPWAVKDKDGNVMKTE 44 V+ Y+L+ PW +K K G+ T+ Sbjct: 488 VEAYVLKGRVPWTLKHKGGDAKATK 512 >SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 461 Score = 23.8 bits (49), Expect = 2.8 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Query: 7 FIIPLLLFLWH--RFVQPYILRFWNPWAVKDKDGNVMKTEFP-FQCKEGVCVFARN 59 F+ LLF+ V PY+ RFW K G ++ P F + C F+++ Sbjct: 265 FVYQCLLFVGKCVNRVTPYLERFWFKCHYGSKLGTALQVAGPGFDVLQMFCYFSQH 320 >SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizosaccharomyces pombe|chr 1|||Manual Length = 758 Score = 23.4 bits (48), Expect = 3.7 Identities = 8/18 (44%), Positives = 12/18 (66%) Query: 2 VCVPCFIIPLLLFLWHRF 19 +C+ CFI+ LF+W F Sbjct: 712 LCISCFIMRHHLFVWSVF 729 >SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schizosaccharomyces pombe|chr 2|||Manual Length = 335 Score = 23.0 bits (47), Expect = 4.8 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 3/15 (20%) Query: 23 YILR---FWNPWAVK 34 Y+LR +WNPWA K Sbjct: 223 YVLRRKHWWNPWAEK 237 >SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces pombe|chr 2|||Manual Length = 341 Score = 22.6 bits (46), Expect = 6.4 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 4 VPCFIIPLLLFLWHRFVQPYIL 25 VP I LLL WHR QP +L Sbjct: 310 VPAKISSLLLNFWHR-NQPLVL 330 >SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter Mfs1|Schizosaccharomyces pombe|chr 1|||Manual Length = 531 Score = 22.6 bits (46), Expect = 6.4 Identities = 7/19 (36%), Positives = 12/19 (63%) Query: 15 LWHRFVQPYILRFWNPWAV 33 +W ++ PY + FW+ AV Sbjct: 202 IWQPWLYPYFMCFWSLGAV 220 >SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein S12|Schizosaccharomyces pombe|chr 2|||Manual Length = 148 Score = 22.6 bits (46), Expect = 6.4 Identities = 10/25 (40%), Positives = 12/25 (48%) Query: 18 RFVQPYILRFWNPWAVKDKDGNVMK 42 + P IL W V D+DGN K Sbjct: 96 KVADPKILGEWAGLCVLDRDGNARK 120 >SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp13|Schizosaccharomyces pombe|chr 1|||Manual Length = 337 Score = 22.2 bits (45), Expect = 8.5 Identities = 10/35 (28%), Positives = 17/35 (48%) Query: 42 KTEFPFQCKEGVCVFARNKNTENSTSNEADQSEDQ 76 ++ P Q K A+N+ T +NE D E++ Sbjct: 130 ESPIPQQVKRDGTTDAKNEETTKPENNEKDDFEEE 164 >SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 2|||Manual Length = 583 Score = 22.2 bits (45), Expect = 8.5 Identities = 9/19 (47%), Positives = 12/19 (63%) Query: 58 RNKNTENSTSNEADQSEDQ 76 RN NT+N+ S A ED+ Sbjct: 152 RNLNTQNNQSTLASNHEDE 170 >SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein S12|Schizosaccharomyces pombe|chr 3|||Manual Length = 145 Score = 22.2 bits (45), Expect = 8.5 Identities = 9/25 (36%), Positives = 12/25 (48%) Query: 18 RFVQPYILRFWNPWAVKDKDGNVMK 42 + P +L W V D+DGN K Sbjct: 93 KVADPKVLGEWAGLCVLDRDGNARK 117 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.325 0.138 0.468 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 395,618 Number of Sequences: 5004 Number of extensions: 14118 Number of successful extensions: 57 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 48 Number of HSP's gapped (non-prelim): 12 length of query: 79 length of database: 2,362,478 effective HSP length: 59 effective length of query: 20 effective length of database: 2,067,242 effective search space: 41344840 effective search space used: 41344840 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 45 (22.2 bits)
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