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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001482-TA|BGIBMGA001482-PA|undefined
         (79 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co...    25   1.2  
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa...    24   2.1  
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi...    24   2.1  
SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch...    24   2.8  
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos...    23   3.7  
SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schi...    23   4.8  
SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces pom...    23   6.4  
SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter M...    23   6.4  
SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein S12|Schizosa...    23   6.4  
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp...    22   8.5  
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    22   8.5  
SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein S12|Sch...    22   8.5  

>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 675

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 11/47 (23%), Positives = 19/47 (40%)

Query: 29  NPWAVKDKDGNVMKTEFPFQCKEGVCVFARNKNTENSTSNEADQSED 75
           N W+ K  D  ++   +   C+E   +  + KN E    N     +D
Sbjct: 108 NEWSKKTNDAQILLNSYETFCEEEALIEEKLKNIEIFEKNFVIMDDD 154


>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 707

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 8/17 (47%), Positives = 14/17 (82%)

Query: 59  NKNTENSTSNEADQSED 75
           N+NT++STS  +++ ED
Sbjct: 101 NENTQDSTSESSEEEED 117


>SPAC20G8.04c |||mitochondrial electron transfer
           flavoprotein-ubiquinone
           oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 632

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 20  VQPYILRFWNPWAVKDKDGNVMKTE 44
           V+ Y+L+   PW +K K G+   T+
Sbjct: 488 VEAYVLKGRVPWTLKHKGGDAKATK 512


>SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone
           oxidase|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 461

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 7   FIIPLLLFLWH--RFVQPYILRFWNPWAVKDKDGNVMKTEFP-FQCKEGVCVFARN 59
           F+   LLF+      V PY+ RFW       K G  ++   P F   +  C F+++
Sbjct: 265 FVYQCLLFVGKCVNRVTPYLERFWFKCHYGSKLGTALQVAGPGFDVLQMFCYFSQH 320


>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 758

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 2   VCVPCFIIPLLLFLWHRF 19
           +C+ CFI+   LF+W  F
Sbjct: 712 LCISCFIMRHHLFVWSVF 729


>SPBC146.11c |mug97|meu33|meiotically upregulated gene
           Mug97|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 335

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 3/15 (20%)

Query: 23  YILR---FWNPWAVK 34
           Y+LR   +WNPWA K
Sbjct: 223 YVLRRKHWWNPWAEK 237


>SPBP4H10.17c |||carboxyl methyl esterase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 341

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 1/22 (4%)

Query: 4   VPCFIIPLLLFLWHRFVQPYIL 25
           VP  I  LLL  WHR  QP +L
Sbjct: 310 VPAKISSLLLNFWHR-NQPLVL 330


>SPAC17C9.16c ||SPAC9E9.16|MFS family transmembrane transporter
           Mfs1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 531

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query: 15  LWHRFVQPYILRFWNPWAV 33
           +W  ++ PY + FW+  AV
Sbjct: 202 IWQPWLYPYFMCFWSLGAV 220


>SPBC1685.02c |rps1202|rps12-2|40S ribosomal protein
           S12|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 148

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 18  RFVQPYILRFWNPWAVKDKDGNVMK 42
           +   P IL  W    V D+DGN  K
Sbjct: 96  KVADPKILGEWAGLCVLDRDGNARK 120


>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
           Alp13|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 337

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)

Query: 42  KTEFPFQCKEGVCVFARNKNTENSTSNEADQSEDQ 76
           ++  P Q K      A+N+ T    +NE D  E++
Sbjct: 130 ESPIPQQVKRDGTTDAKNEETTKPENNEKDDFEEE 164


>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 583

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 58  RNKNTENSTSNEADQSEDQ 76
           RN NT+N+ S  A   ED+
Sbjct: 152 RNLNTQNNQSTLASNHEDE 170


>SPCC962.04 |rps1201|rps12-1, rps12|40S ribosomal protein
           S12|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 145

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 18  RFVQPYILRFWNPWAVKDKDGNVMK 42
           +   P +L  W    V D+DGN  K
Sbjct: 93  KVADPKVLGEWAGLCVLDRDGNARK 117


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.325    0.138    0.468 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,618
Number of Sequences: 5004
Number of extensions: 14118
Number of successful extensions: 57
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 12
length of query: 79
length of database: 2,362,478
effective HSP length: 59
effective length of query: 20
effective length of database: 2,067,242
effective search space: 41344840
effective search space used: 41344840
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)

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