BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001482-TA|BGIBMGA001482-PA|undefined (79 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.17 SB_33071| Best HMM Match : PQ-loop (HMM E-Value=3.2e-14) 28 1.2 SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 3.7 SB_30851| Best HMM Match : C2 (HMM E-Value=0.0042) 25 6.5 SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 25 6.5 SB_5921| Best HMM Match : Lipoprotein_9 (HMM E-Value=5.2) 25 6.5 >SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 665 Score = 30.7 bits (66), Expect = 0.17 Identities = 16/69 (23%), Positives = 31/69 (44%), Gaps = 1/69 (1%) Query: 7 FIIPLLLFLWHRFVQPYILRFWNPWAVKDKDGNVMKTEFPFQCKEGVCVFARNKNTENST 66 F++P+ + L + F+ + W+ AV+ K + CK G+ N+N N Sbjct: 569 FLLPVAIILLYNFIALFHT-MWHIRAVRKKVPLTERVAVLVSCKMGIDNNNNNENNNNDK 627 Query: 67 SNEADQSED 75 ++ D +D Sbjct: 628 DDDIDDDDD 636 >SB_33071| Best HMM Match : PQ-loop (HMM E-Value=3.2e-14) Length = 125 Score = 27.9 bits (59), Expect = 1.2 Identities = 9/19 (47%), Positives = 13/19 (68%) Query: 20 VQPYILRFWNPWAVKDKDG 38 V PYI ++W+ W +D DG Sbjct: 6 VVPYIPQYWDIWRTRDADG 24 >SB_38737| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 244 Score = 26.2 bits (55), Expect = 3.7 Identities = 11/30 (36%), Positives = 13/30 (43%) Query: 2 VCVPCFIIPLLLFLWHRFVQPYILRFWNPW 31 V VP + LL W + PY W PW Sbjct: 215 VIVPNDSLHLLPLTWQNSLAPYDSSVWRPW 244 >SB_30851| Best HMM Match : C2 (HMM E-Value=0.0042) Length = 889 Score = 25.4 bits (53), Expect = 6.5 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 5/48 (10%) Query: 16 WHRFVQPYILRFWNPWAVKDKDGNVMKTEFPFQCKEGVCVFARNKNTE 63 +HR PYI++ ++ W +DG V + +C +C + T+ Sbjct: 398 YHRREGPYIMQCYDYWYKHRRDGRVSE-----KCTTNLCFLIDTRTTQ 440 >SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) Length = 318 Score = 25.4 bits (53), Expect = 6.5 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%) Query: 20 VQPYILRFWNPWAVKDKDGN 39 V PY R NPW + KDGN Sbjct: 76 VLPY--RLGNPWITRKKDGN 93 >SB_5921| Best HMM Match : Lipoprotein_9 (HMM E-Value=5.2) Length = 220 Score = 25.4 bits (53), Expect = 6.5 Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 7 FIIPLLLFLWHRFVQPYILRFW 28 F++PLL+F+ FV P W Sbjct: 197 FVLPLLIFIMLSFVAPIASMLW 218 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.325 0.138 0.468 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,829,892 Number of Sequences: 59808 Number of extensions: 99338 Number of successful extensions: 418 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 415 Number of HSP's gapped (non-prelim): 6 length of query: 79 length of database: 16,821,457 effective HSP length: 57 effective length of query: 22 effective length of database: 13,412,401 effective search space: 295072822 effective search space used: 295072822 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 52 (25.0 bits)
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