BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001482-TA|BGIBMGA001482-PA|undefined (79 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical pr... 27 2.1 Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical pr... 26 2.8 U40417-8|AAP13768.1| 103|Caenorhabditis elegans Saposin-like pr... 26 3.6 Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 25 6.4 Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 25 6.4 M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 25 6.4 Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical p... 25 8.4 U58749-1|AAK18877.1| 238|Caenorhabditis elegans Hypothetical pr... 25 8.4 >Z75529-5|CAA99784.1| 610|Caenorhabditis elegans Hypothetical protein C44H9.6 protein. Length = 610 Score = 26.6 bits (56), Expect = 2.1 Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 48 QCKEGVCVFARNKNTENSTSNEADQSE 74 Q +EG V+ N N N+ +E D+SE Sbjct: 466 QMEEGTGVYTSNNNNNNNNYDEYDRSE 492 >Z81508-6|CAB04147.1| 338|Caenorhabditis elegans Hypothetical protein F20E11.10 protein. Length = 338 Score = 26.2 bits (55), Expect = 2.8 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%) Query: 6 CFIIPLLLFLWHRFVQPY 23 CFIIPLL F W F++ Y Sbjct: 257 CFIIPLLTF-WFAFLEGY 273 >U40417-8|AAP13768.1| 103|Caenorhabditis elegans Saposin-like protein family protein5 protein. Length = 103 Score = 25.8 bits (54), Expect = 3.6 Identities = 9/17 (52%), Positives = 13/17 (76%) Query: 35 DKDGNVMKTEFPFQCKE 51 DKD NV+K +F +CK+ Sbjct: 43 DKDANVIKKDFDAECKK 59 >Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein F29D11.1 protein. Length = 4753 Score = 25.0 bits (52), Expect = 6.4 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 47 FQCKEGVCVFARNK-NTENSTSNEADQSEDQKTK 79 FQCK G C+ K + EN +E+D+ +++ K Sbjct: 1061 FQCKNGRCIPKEWKCDGENDCLDESDEIDEKGDK 1094 >Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein F46C3.3 protein. Length = 2557 Score = 25.0 bits (52), Expect = 6.4 Identities = 10/21 (47%), Positives = 14/21 (66%) Query: 56 FARNKNTENSTSNEADQSEDQ 76 F R ++ NS SNE+ S+DQ Sbjct: 1424 FVRRPHSRNSYSNESTSSDDQ 1444 >M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related protein protein. Length = 4753 Score = 25.0 bits (52), Expect = 6.4 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 47 FQCKEGVCVFARNK-NTENSTSNEADQSEDQKTK 79 FQCK G C+ K + EN +E+D+ +++ K Sbjct: 1061 FQCKNGRCIPKEWKCDGENDCLDESDEIDEKGDK 1094 >Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical protein C30H6.5 protein. Length = 527 Score = 24.6 bits (51), Expect = 8.4 Identities = 10/41 (24%), Positives = 21/41 (51%) Query: 34 KDKDGNVMKTEFPFQCKEGVCVFARNKNTENSTSNEADQSE 74 K D NV++ F Q C + ++++ S+S+ + S+ Sbjct: 477 KQIDFNVLQPSFKAQFLANTCTYTTDQSSSRSSSSSSSSSK 517 >U58749-1|AAK18877.1| 238|Caenorhabditis elegans Hypothetical protein B0496.6 protein. Length = 238 Score = 24.6 bits (51), Expect = 8.4 Identities = 9/20 (45%), Positives = 13/20 (65%) Query: 4 VPCFIIPLLLFLWHRFVQPY 23 +PC+ + LLFL F+ PY Sbjct: 104 IPCYYVLKLLFLLFFFMPPY 123 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.325 0.138 0.468 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,155,256 Number of Sequences: 27539 Number of extensions: 77617 Number of successful extensions: 265 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 260 Number of HSP's gapped (non-prelim): 8 length of query: 79 length of database: 12,573,161 effective HSP length: 59 effective length of query: 20 effective length of database: 10,948,360 effective search space: 218967200 effective search space used: 218967200 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 51 (24.6 bits)
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