Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001481-TA|BGIBMGA001481-PA|IPR005033|YEATS
(238 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr 2|||... 28 1.0
SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase |Schizos... 28 1.0
SPAC17G8.07 |||YEATS family protein|Schizosaccharomyces pombe|ch... 27 1.8
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 1.8
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 1.8
SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1|... 27 2.4
SPBC2A9.11c ||SPBC2D10.01c|nuclear export factor|Schizosaccharom... 26 5.6
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 26 5.6
SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyce... 25 7.4
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 25 7.4
>SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 225
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 174 EMTDDEILQVSRLYISYTSYEKSANALELPPPSDPIYAVPELPARLREALKAAEIDRTSS 233
E+ D Q+ ++ Y S+ + N+ L P ++ YA+ EL L++ A EI +S
Sbjct: 7 EVKADASNQMEQVRKLYNSFMAARNSGVLSPNTELTYAIDELSETLKDLKAAVEIAMKNS 66
>SPBC1921.06c |pvg3|mug49|beta-1,3-galactosyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 28.3 bits (60), Expect = 1.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 61 QLKYSLQIENNTKSSSESRCIYYDFEKPSE 90
Q YS+ + N K++ S+C YD P+E
Sbjct: 284 QTGYSIYLSGNVKNAEFSKCTLYDLILPNE 313
>SPAC17G8.07 |||YEATS family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/41 (21%), Positives = 23/41 (56%)
Query: 28 LQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYSLQI 68
++ PP+E+ E+G +I ++I+ + K + + L++
Sbjct: 75 IESPPFEVIETGWGEFDIMVRIFFAPEAHEKALTFYHHLKL 115
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 1.8
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 155 CPKCGESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALE 201
C +C E T E+ K LRA++ S T +E++ AL+
Sbjct: 143 CVECAELLTEEMSKTLRALKEEKKMYFNYDNFLSSQTVHEENTAALD 189
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.5 bits (58), Expect = 1.8
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 45 IPIQIYLKYSSRPKKIQLKYS-LQIENNTKSSSESRCIYYDFEKPSEQLCRALMSGG 100
+PI+I+ +Y ++P + + YS LQ EN S + + ++E+P E L+ G
Sbjct: 555 VPIEIF-EYYNKPWNLLVLYSLLQYENKLTVSQFTAMQHSEYEEPIESKEELLLQIG 610
>SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 51 LKYSSRPKKIQLKYSLQIENNTKSSSESRCIYYDFEKPS-EQLCRALMSGGGELIARARA 109
LK+ S P +++ S + N++ SE+R +D K S C+ +S G+ A+ R+
Sbjct: 67 LKFVSSPPSVRVPRSRRNRRNSRVDSEARKRQFDRVKHSVSNSCKLHLSLQGQEAAQLRS 126
Query: 110 KHL 112
L
Sbjct: 127 DSL 129
>SPBC2A9.11c ||SPBC2D10.01c|nuclear export
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/58 (31%), Positives = 23/58 (39%)
Query: 64 YSLQIENNTKSSSESRCIYYDFEKPSEQLCRALMSGGGELIARARAKHLLELLSGAGT 121
YS I NTK R +Y F K ++ L + E A H LE+ S T
Sbjct: 233 YSFGIPGNTKEFLAYRILYMLFTKNRSEMNSLLANLKEEDKTNAAVTHALEVRSAMAT 290
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex
subunit Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 25.8 bits (54), Expect = 5.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 28 LQEPPYEIQESGCASIEIPIQIY 50
+++PP++I+E G E+ I IY
Sbjct: 72 IRKPPFQIKEQGWGEFEMEIIIY 94
>SPAC6F12.08c |||exocyst complex subunit Exo84|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 55 SRPKKIQLKYSLQIENNTKSSSESRCIYYDFE 86
SR L++S ++E +TKS C Y F+
Sbjct: 309 SRKHDEDLEFSRELEYHTKSEQADMCSYTSFQ 340
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 7.4
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 34 EIQESGCASIEIPIQIYLKYSSRPKKIQLKYS--LQIENNTKSSSESRCIYYDFEKPSEQ 91
E++ES A I+ +Q + SS + LK++ + I + +S S +YD E+ ++
Sbjct: 24 EVEESTDAPIQRTVQPIVTGSS---VLALKFADGVMIAADNLASYGSLARFYDVERLTKV 80
Query: 92 LCRALMSGGGELIARARAKHLLELL 116
++ GG++ + + LLE L
Sbjct: 81 GDNTIVGAGGDISDYQQIQRLLEKL 105
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 994,163
Number of Sequences: 5004
Number of extensions: 37952
Number of successful extensions: 125
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 118
Number of HSP's gapped (non-prelim): 10
length of query: 238
length of database: 2,362,478
effective HSP length: 71
effective length of query: 167
effective length of database: 2,007,194
effective search space: 335201398
effective search space used: 335201398
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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