Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001481-TA|BGIBMGA001481-PA|IPR005033|YEATS
(238 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13744-1|AAA58361.1| 568|Homo sapiens AF-9 protein. 57 6e-08
BX649194-1|CAE46213.1| 298|Homo sapiens hypothetical protein pr... 57 6e-08
BC036089-1|AAH36089.1| 568|Homo sapiens myeloid/lymphoid or mix... 57 6e-08
AL512635-1|CAH70705.1| 568|Homo sapiens myeloid/lymphoid or mix... 57 6e-08
AL354879-1|CAI14771.1| 568|Homo sapiens myeloid/lymphoid or mix... 57 6e-08
L04285-1|AAA58457.1| 559|Homo sapiens ENL protein. 52 2e-06
D14539-1|BAA03406.1| 559|Homo sapiens LTG19 protein. 52 2e-06
AY102009-1|AAM52484.1| 735|Homo sapiens winged-helix transcript... 32 2.0
BC030644-1|AAH30644.1| 641|Homo sapiens regulatory factor X, 4 ... 31 2.7
BC028582-1|AAH28582.1| 641|Homo sapiens regulatory factor X, 4 ... 31 2.7
AL833921-1|CAD38777.1| 480|Homo sapiens hypothetical protein pr... 31 2.7
AK074913-1|BAC11288.1| 592|Homo sapiens protein ( Homo sapiens ... 31 2.7
AF332192-1|AAK17191.1| 641|Homo sapiens transcription factor NY... 31 2.7
AB195785-1|BAE48238.1| 370|Homo sapiens regulatory factor X4 is... 31 2.7
AB195784-1|BAE48237.1| 390|Homo sapiens regulatory factor X4 is... 31 2.7
AB095366-1|BAE48232.1| 735|Homo sapiens regulatory factor X4, i... 31 2.7
AB095365-1|BAE48231.1| 744|Homo sapiens regulatory factor X4, i... 31 2.7
AB044245-1|BAB59001.1| 563|Homo sapiens transcription factor RF... 31 2.7
>L13744-1|AAA58361.1| 568|Homo sapiens AF-9 protein.
Length = 568
Score = 56.8 bits (131), Expect = 6e-08
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 27 VLQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYSLQIE-NNTKSSSESRCIYYDF 85
V ++PPY+++ESG A +PI++Y K P+K++ Y L + + RC F
Sbjct: 65 VCKDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLFLHLEGHPPVNHLRCEKLTF 124
Query: 86 EKPSEQLCRALMSGGGE 102
P+E R L+ GG+
Sbjct: 125 NNPTEDFRRKLLKAGGD 141
>BX649194-1|CAE46213.1| 298|Homo sapiens hypothetical protein
protein.
Length = 298
Score = 56.8 bits (131), Expect = 6e-08
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 27 VLQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYSLQIE-NNTKSSSESRCIYYDF 85
V ++PPY+++ESG A +PI++Y K P+K++ Y L + + RC F
Sbjct: 65 VCKDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLFLHLEGHPPVNHLRCEKLTF 124
Query: 86 EKPSEQLCRALMSGGGE 102
P+E R L+ GG+
Sbjct: 125 NNPTEDFRRKLLKAGGD 141
>BC036089-1|AAH36089.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 56.8 bits (131), Expect = 6e-08
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 27 VLQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYSLQIE-NNTKSSSESRCIYYDF 85
V ++PPY+++ESG A +PI++Y K P+K++ Y L + + RC F
Sbjct: 65 VCKDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLFLHLEGHPPVNHLRCEKLTF 124
Query: 86 EKPSEQLCRALMSGGGE 102
P+E R L+ GG+
Sbjct: 125 NNPTEDFRRKLLKAGGD 141
>AL512635-1|CAH70705.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 56.8 bits (131), Expect = 6e-08
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 27 VLQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYSLQIE-NNTKSSSESRCIYYDF 85
V ++PPY+++ESG A +PI++Y K P+K++ Y L + + RC F
Sbjct: 65 VCKDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLFLHLEGHPPVNHLRCEKLTF 124
Query: 86 EKPSEQLCRALMSGGGE 102
P+E R L+ GG+
Sbjct: 125 NNPTEDFRRKLLKAGGD 141
>AL354879-1|CAI14771.1| 568|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 568
Score = 56.8 bits (131), Expect = 6e-08
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 27 VLQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYSLQIE-NNTKSSSESRCIYYDF 85
V ++PPY+++ESG A +PI++Y K P+K++ Y L + + RC F
Sbjct: 65 VCKDPPYKVEESGYAGFILPIEVYFKNKEEPRKVRFDYDLFLHLEGHPPVNHLRCEKLTF 124
Query: 86 EKPSEQLCRALMSGGGE 102
P+E R L+ GG+
Sbjct: 125 NNPTEDFRRKLLKAGGD 141
>L04285-1|AAA58457.1| 559|Homo sapiens ENL protein.
Length = 559
Score = 51.6 bits (118), Expect = 2e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 25 RVVLQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYS--LQIENNTKSSSESRCIY 82
R V +EPPY+++ESG A +PI+++ K P+K+ Y L +E N + RC
Sbjct: 63 RRVCKEPPYKVEESGYAGFIMPIEVHFKNKEEPRKVCFTYDLFLNLEGN-PPVNHLRCEK 121
Query: 83 YDFEKPSEQLCRALMSGGGELI 104
F P+ + L+ GG ++
Sbjct: 122 LTFNNPTTEFRYKLLRAGGVMV 143
>D14539-1|BAA03406.1| 559|Homo sapiens LTG19 protein.
Length = 559
Score = 51.6 bits (118), Expect = 2e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 25 RVVLQEPPYEIQESGCASIEIPIQIYLKYSSRPKKIQLKYS--LQIENNTKSSSESRCIY 82
R V +EPPY+++ESG A +PI+++ K P+K+ Y L +E N + RC
Sbjct: 63 RRVCKEPPYKVEESGYAGFIMPIEVHFKNKEEPRKVCFTYDLFLNLEGN-PPVNHLRCEK 121
Query: 83 YDFEKPSEQLCRALMSGGGELI 104
F P+ + L+ GG ++
Sbjct: 122 LTFNNPTTEFRYKLLRAGGVMV 143
>AY102009-1|AAM52484.1| 735|Homo sapiens winged-helix transcription
factor RFX4 variant 3 protein.
Length = 735
Score = 31.9 bits (69), Expect = 2.0
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 486 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSMEVPPPSSPV 531
>BC030644-1|AAH30644.1| 641|Homo sapiens regulatory factor X, 4
(influences HLA class II expression) protein.
Length = 641
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 392 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 437
>BC028582-1|AAH28582.1| 641|Homo sapiens regulatory factor X, 4
(influences HLA class II expression) protein.
Length = 641
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 392 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 437
>AL833921-1|CAD38777.1| 480|Homo sapiens hypothetical protein
protein.
Length = 480
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 231 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 276
>AK074913-1|BAC11288.1| 592|Homo sapiens protein ( Homo sapiens
cDNA FLJ90432 fis, clone NT2RP3000677, weakly similar to
DNA BINDING PROTEIN RFX2. ).
Length = 592
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 343 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 388
>AF332192-1|AAK17191.1| 641|Homo sapiens transcription factor
NYD-sp10 protein.
Length = 641
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 392 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 437
>AB195785-1|BAE48238.1| 370|Homo sapiens regulatory factor X4
isoform F protein.
Length = 370
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 121 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 166
>AB195784-1|BAE48237.1| 390|Homo sapiens regulatory factor X4
isoform E protein.
Length = 390
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 141 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 186
>AB095366-1|BAE48232.1| 735|Homo sapiens regulatory factor X4,
isoform d protein.
Length = 735
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 486 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 531
>AB095365-1|BAE48231.1| 744|Homo sapiens regulatory factor X4,
isoform c protein.
Length = 744
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 495 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 540
>AB044245-1|BAB59001.1| 563|Homo sapiens transcription factor RFX4
protein.
Length = 563
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 159 GESTTAEIRKQLRAVEMTDDEILQVSRLYISYTSYEKSANALELPPPSDPI 209
GE +TAE+R+++ E V S KSA ++E+PPPS P+
Sbjct: 495 GEGSTAEVREEIILTEAAAPTPSPVPSF-----SPAKSATSVEVPPPSSPV 540
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,493,734
Number of Sequences: 224733
Number of extensions: 1245498
Number of successful extensions: 3451
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3439
Number of HSP's gapped (non-prelim): 18
length of query: 238
length of database: 73,234,838
effective HSP length: 88
effective length of query: 150
effective length of database: 53,458,334
effective search space: 8018750100
effective search space used: 8018750100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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