Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001480-TA|BGIBMGA001480-PA|IPR002557|Chitin binding
Peritrophin-A
(289 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 58 7e-09
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 39 0.005
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 38 0.008
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 38 0.008
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 36 0.044
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 34 0.13
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 30 2.2
AF101310-4|AAC69214.2| 662|Caenorhabditis elegans Hypothetical ... 29 3.8
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 58.0 bits (134), Expect = 7e-09
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 228 NCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWP 261
NC +FY CVWGRKV+ CPS FN ++ VCDWP
Sbjct: 1257 NCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWP 1290
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 39 CNKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV 74
C FY+C +G+ V M C FN CDWP V
Sbjct: 1258 CEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 41 KFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-ECGDR 79
K+ +C+ G + C +LYFN T +C + + V ECG +
Sbjct: 707 KYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 222 LLPHEGNCNLFYYCVWGRKVLRH--CPSTLHFNKVIQVCDWPWD-AGCASSFDKN 273
L +E +C+ C +G ++ H C S+L FN++ CD+P +GC + N
Sbjct: 1189 LYRNERDCSAILQC-FGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTN 1242
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 39 CNKFYKCTFGQPVEMV-CYGNLYFNLKTWQCDWPENV 74
C+ +C G+ E C +L FN T +CD+P+ V
Sbjct: 1196 CSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKV 1232
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 227 GNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVC 258
G N F CV G + CP +L FN+ Q C
Sbjct: 110 GCSNQFISCVAGGAYMAKCPDSLVFNERTQDC 141
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 230 NLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDA-GCASSFDK 272
N+F+ C G R+CP+ L FN I CDWP + C+ +K
Sbjct: 192 NVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEKSEK 235
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 20 CPPEQSENWEIELLLPHPQC-NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-ECG 77
C E E + + +C N F+ C+ G C NL FN CDWP+NV +C
Sbjct: 171 CSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCS 230
Query: 78 DR 79
++
Sbjct: 231 EK 232
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 40 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 76
+ F CT G P+ M C L F+ K CD+ NV EC
Sbjct: 253 SSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 227 GNCNL-FYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWD 263
G C+ F C G ++ CP L F++ Q+CD+ W+
Sbjct: 249 GRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWN 286
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 41 KFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-ECGD 78
+F C G+ M C +L ++ CDW NV ECG+
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGE 79
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 232 FYYCVWGRKVLRHCPSTLHFNKVIQVCDW 260
F CV G CP L ++K ++ CDW
Sbjct: 42 FLACVSGEARYMDCPEDLVYHKNLEFCDW 70
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 235 CVWGRKVLRHCPSTLHFNKVIQVCDWP 261
C GR+ + CP +L FN+ +CD+P
Sbjct: 329 CQNGRENIFECPPSLVFNENSLICDYP 355
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 227 GNCNL-FYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWD-AGCA 267
G C+ F C G + CP++L FN I VCDWP D A CA
Sbjct: 258 GVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECA 300
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 38 QCNK-FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 76
QC+ F CT G+ + M C L F+ T +CD+ NV EC
Sbjct: 319 QCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 227 GNCN-LFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDA-GCASS 269
G C F C G + CP+ L +N+ + +CDW + GC S
Sbjct: 35 GECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCEGS 79
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 35 PHPQCN-KFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 76
P+ C+ F C+ G M C +L FN CDWP +V EC
Sbjct: 256 PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 227 GNCNL-FYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWD-AGCA 267
G C+ F C G + CP++L FN I VCDWP D A CA
Sbjct: 258 GVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECA 300
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 38 QCNK-FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 76
QC+ F CT G+ + M C L F+ T +CD+ NV EC
Sbjct: 319 QCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 227 GNCN-LFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDA-GCASS 269
G C F C G + CP+ L +N+ + +CDW + GC S
Sbjct: 35 GECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCEGS 79
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 35 PHPQCN-KFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV-EC 76
P+ C+ F C+ G M C +L FN CDWP +V EC
Sbjct: 256 PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC 299
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 35.5 bits (78), Expect = 0.044
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 224 PHEGNCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCA 267
P+ NC LF C+ + CPS L ++ ++ C +GC+
Sbjct: 490 PNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCS 533
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 39 CNKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVEC 76
C KF +C G C L F+ T CD P+ +C
Sbjct: 578 CLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 228 NCNLFYYCVWGRKVLRHCPSTLHFNKVIQVCDWPWDAGCA 267
+C F CV G CP+ L F+ +CD P + CA
Sbjct: 577 DCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKCA 616
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 42 FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENV 74
FY C GQ V C NL FN +CD+ NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 39 CNK-FYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVE 75
C K F+ C G+ C G+L FN T CD+ EN E
Sbjct: 446 CTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 31.9 bits (69), Expect = 0.54
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 227 GNC-NLFYYCVWGRKVLRHCPSTLHFNKVIQVCDW 260
G C ++FY C G+ V CP+ L FN + CD+
Sbjct: 585 GLCKSVFYICANGQVVATTCPANLIFNPYVGECDY 619
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 232 FYYCVWGRKVLRHCPSTLHFNKVIQVCDW 260
F+ C GR CP L FNK CD+
Sbjct: 450 FFTCHDGRAFANDCPGDLVFNKATGTCDF 478
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 225 HEGNCNLFYYCVWGRKVLR-HCPSTLHFNKVIQVCDWPWDA 264
+ C+ +Y+ ++ + CP++L F+K + C +P DA
Sbjct: 963 YSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDA 1003
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 40 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVEC 76
N+ Y F +VC G+L +++ W PE EC
Sbjct: 417 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 453
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 40 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVEC 76
N+ Y F +VC G+L +++ W PE EC
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 40 NKFYKCTFGQPVEMVCYGNLYFNLKTWQCDWPENVEC 76
N+ Y F +VC G+L +++ W PE EC
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
>AF101310-4|AAC69214.2| 662|Caenorhabditis elegans Hypothetical
protein C39F7.5 protein.
Length = 662
Score = 29.1 bits (62), Expect = 3.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 215 VNPHIHWLLPHEGNCNLFYYCVWGRKVLRH 244
+NP +HWL P + + YY + +L+H
Sbjct: 520 INPDVHWLKPEDESTGPRYYRPYHTALLKH 549
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 36 HPQCNKFYKCTFGQPVEMVCYGNLYFNLKTWQC 68
H NKF+KC G+ + + C N +++ T C
Sbjct: 29 HFDSNKFWKCEGGRWIVVTCQINYFYDATTGFC 61
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.141 0.518
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,614,400
Number of Sequences: 27539
Number of extensions: 173437
Number of successful extensions: 400
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 337
Number of HSP's gapped (non-prelim): 63
length of query: 289
length of database: 12,573,161
effective HSP length: 81
effective length of query: 208
effective length of database: 10,342,502
effective search space: 2151240416
effective search space used: 2151240416
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 59 (27.9 bits)
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