GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001480-TA|BGIBMGA001480-PA|IPR002557|Chitin binding
Peritrophin-A
         (289 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   5.5  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   9.6  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   9.6  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 203 KPEIDFLENGCPVNPHIHWLLPH 225
           + E+D    G  +  H HWL  H
Sbjct: 495 RKELDSKTGGVNLKGHAHWLTLH 517


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/23 (30%), Positives = 10/23 (43%)

Query: 39  CNKFYKCTFGQPVEMVCYGNLYF 61
           C  F  C+       + YG L+F
Sbjct: 114 CRNFSTCSSHPTAAFISYGTLFF 136


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/23 (30%), Positives = 10/23 (43%)

Query: 39  CNKFYKCTFGQPVEMVCYGNLYF 61
           C  F  C+       + YG L+F
Sbjct: 113 CRNFSTCSSHPTAAFISYGTLFF 135


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.141    0.518 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,278
Number of Sequences: 429
Number of extensions: 1802
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 289
length of database: 140,377
effective HSP length: 57
effective length of query: 232
effective length of database: 115,924
effective search space: 26894368
effective search space used: 26894368
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 43 (21.4 bits)