BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001478-TA|BGIBMGA001478-PA|undefined (824 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 31 4.9 08_02_1410 - 26876243-26876497,26877129-26877239,26877240-268773... 30 8.6 >07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268, 22582341-22582477,22582567-22582683,22583277-22583440, 22583542-22583756,22583838-22584004,22584206-22584559, 22584647-22584795,22584907-22585030,22585132-22585371, 22585723-22586140,22586297-22586920,22586999-22587183, 22587302-22587412,22587583-22587789,22587869-22587967, 22588063-22588159,22588296-22588384,22588495-22588548, 22588671-22588793,22588872-22588940,22589020-22589089, 22589202-22589260,22589367-22589570,22590032-22590060, 22590375-22590433,22590513-22590634,22591637-22591830, 22591974-22592088 Length = 1680 Score = 30.7 bits (66), Expect = 4.9 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Query: 122 EHIQNTIVNFLSLIEIWYLNKSDSDIPQRCSKIAQQLKICMEFNEATLPDIDKNYD 177 E ++ I F LI + L+ SDS + QR S + K+C + L D+ NYD Sbjct: 363 ESLKGEIGVFFPLIVLRSLDSSDSPLSQRASVLRMLEKVCKD--SQMLADMFVNYD 416 >08_02_1410 - 26876243-26876497,26877129-26877239,26877240-26877324, 26877620-26877672,26878318-26878440,26878514-26878597, 26878708-26878773,26879512-26879584,26879854-26879888, 26879970-26880212 Length = 375 Score = 29.9 bits (64), Expect = 8.6 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 762 ENVLQGKSSSVLILLVGNADEDEEQYKEFSVMGAAQSAGISVENIVDFY 810 E+VLQG SS+ + G E ++ F + G S + V +I+ FY Sbjct: 215 ESVLQGHESSIGFVTSGEIQRRAEFFEPF-ISGLTNSTVVQVSSILPFY 262 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.317 0.133 0.382 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,807,016 Number of Sequences: 37544 Number of extensions: 699924 Number of successful extensions: 1585 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 1585 Number of HSP's gapped (non-prelim): 2 length of query: 824 length of database: 14,793,348 effective HSP length: 88 effective length of query: 736 effective length of database: 11,489,476 effective search space: 8456254336 effective search space used: 8456254336 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 64 (29.9 bits)
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