BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001478-TA|BGIBMGA001478-PA|undefined (824 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22) 70 9e-12 SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.70 SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.0 SB_30272| Best HMM Match : GDI (HMM E-Value=0) 31 5.0 SB_41113| Best HMM Match : VWA (HMM E-Value=1.8e-21) 30 8.7 SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 30 8.7 >SB_3294| Best HMM Match : DUF755 (HMM E-Value=0.22) Length = 884 Score = 69.7 bits (163), Expect = 9e-12 Identities = 34/91 (37%), Positives = 53/91 (58%) Query: 17 NERAKKLYRYLSDVARRINDMSTTSKFVSDLFTTNIEVQRQKLRDNCEKLLFLDPINYGK 76 N +LYR +++R++ + ++ ++F + RQ+LR NCE L+F P YG+ Sbjct: 20 NTSVTRLYRSSIQLSQRLDLILKSATNWEEIFQAETIIIRQRLRSNCESLIFNHPKEYGR 79 Query: 77 KALELLWRKVYYDTISTAKKLRTDSEHDHFL 107 KA ELLWRKV+YD I ++ R S +D L Sbjct: 80 KAEELLWRKVFYDVIQWLRQHRKVSPNDEHL 110 Score = 33.1 bits (72), Expect = 0.93 Identities = 12/38 (31%), Positives = 24/38 (63%) Query: 444 MASIKLLLDWILIEKDLILSCGDSGESLFQCVVDLLNI 481 + ++K++ DW+ D+I +C +S SL+ + LLN+ Sbjct: 640 LPAVKVMADWLRTNPDIISTCVESSTSLWSKMASLLNL 677 >SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4482 Score = 33.5 bits (73), Expect = 0.70 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 659 LRRVKQLLLTTNFVLMVPTVVLQEL-DNLKREQSTARKAI-RWL--ELQLKNGSRFLRAQ 714 + RV +LL + L VP LQ + D+L +Q TA K +W E+Q + +LR++ Sbjct: 3228 ITRVIELLQQRSRDLDVPLYDLQTMWDSLMHDQVTASKTHDKWEPPEIQYEGPVTYLRSE 3287 Query: 715 RPNQSKPLPLLKYPRKAPAHI 735 P S LP K KA A + Sbjct: 3288 NPKFSPTLPQYKTSDKAWAEV 3308 >SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2520 Score = 30.7 bits (66), Expect = 5.0 Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 140 LNKSDSDIPQRCSKIAQQLKICMEFNEATLPDIDKNYDDYLSILEHE 186 LNK+ D+ Q S+ +QLK E E+ + + +YD+ L E E Sbjct: 512 LNKTIEDLTQEVSQKDKQLKALEESKESDIRTLSSDYDNRLKDKERE 558 >SB_30272| Best HMM Match : GDI (HMM E-Value=0) Length = 1199 Score = 30.7 bits (66), Expect = 5.0 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%) Query: 577 RFNRTMKLFYLKNIHP----PKLNTKINHKRSREWHS 609 R R M+L LK HP K NTK+N K+ +WH+ Sbjct: 915 RRGRNMELIKLKIKHPIKGVDKGNTKLNGKKPHDWHT 951 >SB_41113| Best HMM Match : VWA (HMM E-Value=1.8e-21) Length = 240 Score = 29.9 bits (64), Expect = 8.7 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Query: 8 LSEAKIAERNERAKKLYRYLSDVARRINDMSTTSKFVSDL---FTTNIEVQRQKLRDNCE 64 ++E + E AK++ LS + R I V+D+ FTT + + LR+N + Sbjct: 18 VTEQMFKQEKEFAKRIAEALSGLPREIRLSVAPYSNVADISIPFTTFTQESKNVLRENID 77 Query: 65 KLLFL 69 K+ FL Sbjct: 78 KITFL 82 >SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) Length = 1702 Score = 29.9 bits (64), Expect = 8.7 Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 684 DNLKREQSTARKAIRWLELQLKN-GSRFL 711 DNL R + TAR+ I WLE+++ N G FL Sbjct: 1310 DNLSRTRYTARQMIFWLEMRVLNIGIMFL 1338 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.317 0.133 0.382 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,708,055 Number of Sequences: 59808 Number of extensions: 865499 Number of successful extensions: 2001 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 1995 Number of HSP's gapped (non-prelim): 10 length of query: 824 length of database: 16,821,457 effective HSP length: 88 effective length of query: 736 effective length of database: 11,558,353 effective search space: 8506947808 effective search space used: 8506947808 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 64 (29.9 bits)
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