GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001478-TA|BGIBMGA001478-PA|undefined
         (824 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    27   2.0  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    27   2.0  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    25   8.0  

>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 27.1 bits (57), Expect = 2.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)

Query: 1   MKNGCLDLSEAKIAERNERAKKLYRYLSDVARRIN 35
           +K  C +  + + A+ N   +KL  YLS+V+ R+N
Sbjct: 73  LKQRCQEAHDERTAKVNAIYEKLPAYLSEVSARVN 107


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 27.1 bits (57), Expect = 2.0
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 460 LILSCGDSGESLFQCVVDLLNIFTFYFNTKSDEGTKEDCELIKYIR----NLVMKMKLEY 515
           ++ S G    S     +D  +I    FN    EG + D      IR     +V K + + 
Sbjct: 205 IVASAGSLKRSQLGSFIDEHDI-VMRFNHAPTEGYEADVGSKTTIRVVNSQVVTKPEYQL 263

Query: 516 KTIPLPEDINLRGTNICKFDKDAAEW 541
            T PL  ++ +   +  KFD+  AEW
Sbjct: 264 LTAPLFRNVTIAAWDPGKFDQTLAEW 289


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 25.0 bits (52), Expect = 8.0
 Identities = 9/12 (75%), Positives = 10/12 (83%)

Query: 806 IVDFYSKWRQTS 817
           + DFYS WRQTS
Sbjct: 97  LYDFYSYWRQTS 108


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,753
Number of Sequences: 2123
Number of extensions: 26488
Number of successful extensions: 60
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 58
Number of HSP's gapped (non-prelim): 3
length of query: 824
length of database: 516,269
effective HSP length: 70
effective length of query: 754
effective length of database: 367,659
effective search space: 277214886
effective search space used: 277214886
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)