GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001477-TA|BGIBMGA001477-PA|undefined
         (597 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         29   0.27 
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         29   0.27 
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         29   0.27 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    29   0.27 
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    29   0.35 
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         28   0.61 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   1.1  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   7.5  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   7.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   10.0 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   10.0 

>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 0.27
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 304 LNTVREESEPKYEKIENRITEKKIKNHKGKESQLENKLSNRQEISTPLLTEPTLDRISYA 363
           ++ +++E+  +Y +  +RI E  + N     +QL   +    E++  LL   +L +    
Sbjct: 154 IDKIKKEAN-QYNREADRIAED-LANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAV 211

Query: 364 DSLKQLK 370
           D+LKQLK
Sbjct: 212 DALKQLK 218


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 0.27
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 304 LNTVREESEPKYEKIENRITEKKIKNHKGKESQLENKLSNRQEISTPLLTEPTLDRISYA 363
           ++ +++E+  +Y +  +RI E  + N     +QL   +    E++  LL   +L +    
Sbjct: 154 IDKIKKEAN-QYNREADRIAED-LANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAV 211

Query: 364 DSLKQLK 370
           D+LKQLK
Sbjct: 212 DALKQLK 218


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 29.5 bits (63), Expect = 0.27
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 304 LNTVREESEPKYEKIENRITEKKIKNHKGKESQLENKLSNRQEISTPLLTEPTLDRISYA 363
           ++ +++E+  +Y +  +RI E  + N     +QL   +    E++  LL   +L +    
Sbjct: 154 IDKIKKEAN-QYNREADRIAED-LANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAV 211

Query: 364 DSLKQLK 370
           D+LKQLK
Sbjct: 212 DALKQLK 218


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 29.5 bits (63), Expect = 0.27
 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 304  LNTVREESEPKYEKIENRITEKKIKNHKGKESQLENKLSNRQEISTPLLTEPTLDRISYA 363
            ++ +++E+  +Y +  +RI E  + N     +QL   +    E++  LL   +L +    
Sbjct: 1293 IDKIKKEAN-QYNREADRIAED-LANKMRDHAQLLENVGTNIELAETLLDRASLQKEDAV 1350

Query: 364  DSLKQLK 370
            D+LKQLK
Sbjct: 1351 DALKQLK 1357


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 29.1 bits (62), Expect = 0.35
 Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 265 KLKNVYMQNKSWLDDEITKRLKNETQMHQKFRKEIKVAILNTVRE-ESEPKYEKIENRIT 323
           K+ + Y++N  W    + K+LK       +  K  K  IL T+R+ ++  +   ++  + 
Sbjct: 8   KIVHNYLENPLWSASRLAKKLKFPRNTVWRVIKRYK-EILTTIRKPQANRRSGTVDQNLR 66

Query: 324 EKKIKNHKGKESQLENKLSNR 344
            K +K  KG  +  +  L+ +
Sbjct: 67  SKILKTIKGNPNLSDRDLARK 87


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 0.61
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 2/67 (2%)

Query: 304 LNTVREESEPKYEKIENRITEKKIKNHKGKESQLENKLSNRQEISTPLLTEPTLDRISYA 363
           ++ +++E+  +Y +  +RI E      +     LEN  +N  E++  LL   +L +    
Sbjct: 154 IDKIKKEAN-QYNREADRIAEDLATKMRDHAQLLENVGTNI-ELAETLLDRASLQKEDAV 211

Query: 364 DSLKQLK 370
           D+LKQLK
Sbjct: 212 DALKQLK 218


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 15/134 (11%)

Query: 298 EIKVAILNTVREESEPKYEKIENRITEKKIKNHKGKESQLENKLSNRQEISTPLLT-EPT 356
           E K   +N +RE SE K EKI   +  + I++      + + +LS  Q+      T E  
Sbjct: 170 ERKEESMNLLRE-SEGKLEKISEYL--RTIEDRLKTLEEEKEELSEYQKWDKARRTLEYV 226

Query: 357 LDRISYADSLKQLKNIQGAIKQSEDTTXXXXXXXXXXXXXXXQEIDEGLNRITSDYEILK 416
           +      ++ KQL+ + G  K S D                 QEI +  +R+ +  + LK
Sbjct: 227 IYETELKETRKQLEELDGQRKSSGDKQLLLT-----------QEIQKAQDRLKNAQKALK 275

Query: 417 DDRHVFLNAKKERN 430
           D +   + AK E++
Sbjct: 276 DAKKDVVTAKDEKS 289


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 179 KLQEENAYLRNKLKELTGTLNLQKKPVLS-KSAI--HHERCQKVYEESLNNRH-ADKITK 234
           KL+E+ A L+ +L E++GT +     V + K  I  H E+     +E     H  DK+ K
Sbjct: 840 KLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLK 899

Query: 235 CVDE 238
             DE
Sbjct: 900 QNDE 903


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 254 EYERDFLNDINKLKNVYMQNKSWLDDEITKRLKNETQMHQKFRKEIKVAILNTVREESEP 313
           E+ER     I+KLK  Y +     ++E  +++ ++ Q+ ++F+       +  +R+    
Sbjct: 16  EHERLIEEFISKLKKSYKKASKAEENEAPRKVSHKAQL-ERFKNYANNLEIEDLRDGMIA 74

Query: 314 KYEKIENRITEKKIKNHKGKESQLENKLSNRQEIST 349
             + IE    E  IK     + QL+ K +   E+ T
Sbjct: 75  --QMIE--FMESMIKEMSELKKQLKQKSTQEIEVQT 106


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 10.0
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 498 HDLNAFGEVSDTKVVINELKSCKYKDKNKTLKELKWYEKRAAFR-TEARKKLEHELFG 554
           H+LN   E  +  ++  + + C+ KD+ + L     +EK+   R +E  K   H L G
Sbjct: 347 HNLNLMVEYCEQDIITIDKQKCEAKDREEQL----LHEKQNLIRISELEKDYLHTLDG 400


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 10.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 542 TEARKKLEHELFGENNANKASWYFRRMNKREQC 574
           +E +K  +HE+  + N N    +   M   EQC
Sbjct: 444 SEIKKSSDHEVMVQKNRNATECHEEGMECSEQC 476


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.310    0.127    0.357 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,455
Number of Sequences: 2123
Number of extensions: 24665
Number of successful extensions: 78
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 72
Number of HSP's gapped (non-prelim): 15
length of query: 597
length of database: 516,269
effective HSP length: 68
effective length of query: 529
effective length of database: 371,905
effective search space: 196737745
effective search space used: 196737745
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 50 (24.2 bits)