GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001476-TA|BGIBMGA001476-PA|IPR006620|Prolyl
4-hydroxylase, alpha subunit, IPR008162|Inorganic pyrophosphatase
         (317 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.2  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   6.8  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 179 KIKYSIGHYFGVNPERIYLTHPTFFSE 205
           +I ++IG +F + P  I L   TF  +
Sbjct: 7   QIMFTIGKFFALTPRSIKLEKQTFIQK 33


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 74  ISGKGQIVECSSAYLREIDKFEGCFPKQCKRF 105
           +SG     EC    +  + ++ GC PK    F
Sbjct: 32  VSGASTTDECQVTPVIHVLQYPGCVPKPIPSF 63


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,521
Number of Sequences: 317
Number of extensions: 3059
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 317
length of database: 114,650
effective HSP length: 57
effective length of query: 260
effective length of database: 96,581
effective search space: 25111060
effective search space used: 25111060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)