BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001475-TA|BGIBMGA001475-PA|IPR000504|RNA-binding region RNP-1 (RNA recognition motif), IPR006553|Leucine-rich repeat, cysteine-containing subtype, IPR001810|Cyclin-like F-box (577 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 44 4e-04 Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 39 0.008 AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 39 0.011 AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 39 0.011 U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 38 0.019 U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 37 0.045 U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 37 0.045 AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 37 0.045 AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 37 0.045 AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 37 0.045 Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.059 AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.059 Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 36 0.078 U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 36 0.078 U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 36 0.078 U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 36 0.078 AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 36 0.078 Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.14 Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 35 0.14 Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 35 0.14 X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 35 0.14 X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 35 0.14 DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 35 0.14 Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 34 0.24 Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 34 0.24 U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 34 0.24 U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.24 U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.32 AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 34 0.32 AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 34 0.32 AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 34 0.32 AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 34 0.32 AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.32 AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 33 0.42 AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 33 0.42 L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 33 0.55 L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 33 0.55 U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 32 0.96 U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 32 0.96 Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 31 1.7 U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 31 1.7 AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 31 1.7 AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 31 1.7 AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 31 1.7 AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 31 1.7 AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 31 1.7 AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 31 1.7 U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 2.2 AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 31 2.9 AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 31 2.9 AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 31 2.9 AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 31 2.9 Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 30 3.9 U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 30 3.9 D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 30 3.9 AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 30 3.9 AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 30 3.9 AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 30 3.9 AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 30 3.9 Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 30 5.1 Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical pr... 30 5.1 AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 30 5.1 AF025460-5|AAB70988.5| 584|Caenorhabditis elegans Polh (dna pol... 30 5.1 AB244413-1|BAE72703.1| 584|Caenorhabditis elegans DNA polymeras... 30 5.1 Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 29 6.8 U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 29 6.8 >U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical protein EEED8.10a protein. Length = 738 Score = 43.6 bits (98), Expect = 4e-04 Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 23/257 (8%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 RK+ V+N+ K T+++L F+QYG I SC L +K KT + N A Sbjct: 112 RKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEK---KTSVFGTLPKHSRNCGTATI 168 Query: 109 ALEAPSHEKILRGRNLYTSPAD-SWHQPVEDADGRVCWKPRFSRTNVRSRSRSKDLDEAG 167 + H R +N +P + ++ V V K R + V S D+ G Sbjct: 169 TFKKSEHAD--RAKN--ANPEELKFYDQVMVVSAYVS-KKRGGKGLVLS-------DDVG 216 Query: 168 TSTKMSTVATLXXXXXXXXXXVKSCTILDVLNRDCLTHILNYIPIRDIILSERVSKGW-- 225 S + + ++ +S + +V ++ L +++++PI + I ERV+K + Sbjct: 217 -SREDTPLSRASSTQSLASGSEQSFNLGNVPDK-ILRRVISFLPIHETIRLERVNKKFME 274 Query: 226 -QIMVQEYLAGVRVLKTSWWQAEAARLTTAVLRRVLARVGDSLLALHIDHHWSALNDRTA 284 I E + + + + + + + + T+ L+ +L R G L +L + L+DR A Sbjct: 275 ESIKSWELVNKIALARETVFNKQRP-MRTSHLKAILTRAGAHLRSLDVSGIVHLLDDRRA 333 Query: 285 -HSIARFCPKLEELKLT 300 IA CP L +L ++ Sbjct: 334 LKVIATCCPNLVDLDIS 350 >Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein T23F6.4 protein. Length = 872 Score = 39.1 bits (87), Expect = 0.008 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 3/101 (2%) Query: 25 ISNLELAPYG-IRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMG 83 IS+ E A G ++ K ++ KL V NLP + + E+ +F +G +K+ +++ Sbjct: 723 ISHRENADKGALKRKEVKQKEQGECTKLLVRNLPFEASVKEVETLFETFGAVKT--IRIP 780 Query: 84 DKGPNKTPIPTYAFVTFSNPADAHQALEAPSHEKILRGRNL 124 K K + FV F + +AH+A ++ H L GR L Sbjct: 781 KKPGQKQQHRGFGFVDFISADEAHRAFDSLVHSTHLYGRRL 821 Score = 32.3 bits (70), Expect = 0.96 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 +L V NLP T +L F +YG I LK +G + +AFV F + A A Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFR----GFAFVGFLDEGSASNA 59 Query: 110 LEAPSHEKILRGRNL 124 L A S++ + L Sbjct: 60 L-AKSNQTFFNSKKL 73 Score = 29.9 bits (64), Expect = 5.1 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Query: 96 AFVTFSNPADAHQALEAPSHEKILRGRNLYT--SPAD---SWHQPVEDADGRVCWKPRFS 150 A V NP DA +A A ++ + R + LY +P D + P ED V KP+ S Sbjct: 522 ALVIMGNPVDAKKAFRALAYSRF-RSQPLYLEWAPYDVMGATAPPAEDKTAEVADKPKLS 580 Query: 151 RTNVRSRSRSKD 162 + + + K+ Sbjct: 581 KREMTYEEKRKE 592 >AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical protein Y111B2A.18 protein. Length = 258 Score = 38.7 bits (86), Expect = 0.011 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 +K+YV NLP E+ +F +YG IK +K G +G P +AFV F + DA Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSG-RG------PAFAFVEFEDHRDAED 61 Query: 109 ALEA 112 A+ A Sbjct: 62 AVRA 65 >AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. Length = 258 Score = 38.7 bits (86), Expect = 0.011 Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 7/64 (10%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 +K+YV NLP E+ +F +YG IK +K G +G P +AFV F + DA Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSG-RG------PAFAFVEFEDHRDAED 61 Query: 109 ALEA 112 A+ A Sbjct: 62 AVRA 65 >U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-binding protein protein. Length = 646 Score = 37.9 bits (84), Expect = 0.019 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 +YV N + L VFA++G I SC + M +G +K + FV F+NP +A A+ Sbjct: 215 VYVKNFGDHYNKETLEKVFAKFGNITSCEV-MTVEGKSK----GFGFVAFANPEEAETAV 269 Query: 111 EAPSHEKILRGRNL 124 +A H+ + G +L Sbjct: 270 QA-LHDSTIEGTDL 282 Score = 31.9 bits (69), Expect = 1.3 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 41 KTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTF 100 +T + LYV +L P + L+ F+ G + S +++ + + YA+V F Sbjct: 24 QTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLS--IRVCRDNATRLSLG-YAYVNF 80 Query: 101 SNPADAHQALEAPSHEKI 118 PADA +A++ + E + Sbjct: 81 QQPADAERAMDTMNFEAL 98 >U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna binding protein familyprotein 1, isoform a protein. Length = 584 Score = 36.7 bits (81), Expect = 0.045 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 5/97 (5%) Query: 25 ISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGD 84 I +E + ++ P TE+ RKL++ L K L +FA++G I+ C + Sbjct: 119 IKVIEGMHHPVQMKPADTENRNE-RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177 Query: 85 KGPNKTPIPTYAFVTFSNPADAHQALEAPSHEKILRG 121 G ++ AFVTF+N + A A + H + + G Sbjct: 178 DGKSR----GCAFVTFTNRSCAVVATKEMHHSQTMEG 210 >U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribonucleoprotein protein. Length = 584 Score = 36.7 bits (81), Expect = 0.045 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 5/97 (5%) Query: 25 ISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGD 84 I +E + ++ P TE+ RKL++ L K L +FA++G I+ C + Sbjct: 119 IKVIEGMHHPVQMKPADTENRNE-RKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177 Query: 85 KGPNKTPIPTYAFVTFSNPADAHQALEAPSHEKILRG 121 G ++ AFVTF+N + A A + H + + G Sbjct: 178 DGKSR----GCAFVTFTNRSCAVVATKEMHHSQTMEG 210 >AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical protein Y106G6H.2c protein. Length = 586 Score = 36.7 bits (81), Expect = 0.045 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 +YV N + L +FA++G I SC + M +G +K + FV F+NP +A A+ Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEV-MTVEGKSK----GFGFVAFANPEEAETAV 209 Query: 111 EAPSHEKILRGRNL 124 +A H+ + G +L Sbjct: 210 QA-LHDSTIEGTDL 222 Score = 31.9 bits (69), Expect = 1.3 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 41 KTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTF 100 +T + LYV +L P + L+ F+ G + S +++ + + YA+V F Sbjct: 24 QTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLS--IRVCRDNATRLSLG-YAYVNF 80 Query: 101 SNPADAHQALEAPSHEKI 118 PADA +A++ + E + Sbjct: 81 QQPADAERAMDTMNFEAL 98 >AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical protein Y106G6H.2b protein. Length = 583 Score = 36.7 bits (81), Expect = 0.045 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 +YV N + L +FA++G I SC + M +G +K + FV F+NP +A A+ Sbjct: 152 VYVKNFGDHYNKETLEKLFAKFGNITSCEV-MTVEGKSK----GFGFVAFANPEEAETAV 206 Query: 111 EAPSHEKILRGRNL 124 +A H+ + G +L Sbjct: 207 QA-LHDSTIEGTDL 219 >AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical protein Y106G6H.2a protein. Length = 646 Score = 36.7 bits (81), Expect = 0.045 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 +YV N + L +FA++G I SC + M +G +K + FV F+NP +A A+ Sbjct: 215 VYVKNFGDHYNKETLEKLFAKFGNITSCEV-MTVEGKSK----GFGFVAFANPEEAETAV 269 Query: 111 EAPSHEKILRGRNL 124 +A H+ + G +L Sbjct: 270 QA-LHDSTIEGTDL 282 Score = 31.9 bits (69), Expect = 1.3 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 41 KTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTF 100 +T + LYV +L P + L+ F+ G + S +++ + + YA+V F Sbjct: 24 QTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLS--IRVCRDNATRLSLG-YAYVNF 80 Query: 101 SNPADAHQALEAPSHEKI 118 PADA +A++ + E + Sbjct: 81 QQPADAERAMDTMNFEAL 98 >Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical protein C17D12.2 protein. Length = 514 Score = 36.3 bits (80), Expect = 0.059 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 28 LELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGP 87 +++ P S P +D + +KL++ L + + E+ +FA +G + + G G Sbjct: 103 MQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGA 162 Query: 88 NKTPIPTYAFVTFSNPADAHQALEA 112 +K AFV + + DAH A+ A Sbjct: 163 SK----GCAFVKYKHGLDAHMAISA 183 >AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-binding protein protein. Length = 514 Score = 36.3 bits (80), Expect = 0.059 Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 4/85 (4%) Query: 28 LELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGP 87 +++ P S P +D + +KL++ L + + E+ +FA +G + + G G Sbjct: 103 MQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGA 162 Query: 88 NKTPIPTYAFVTFSNPADAHQALEA 112 +K AFV + + DAH A+ A Sbjct: 163 SK----GCAFVKYKHGLDAHMAISA 183 >Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical protein R07E5.14 protein. Length = 142 Score = 35.9 bits (79), Expect = 0.078 Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 9/108 (8%) Query: 22 IATISNLELAPYGIRSVPTKTEDGIPIRKL-----YVTNLPPKTTRTELYGVFAQYGLIK 76 +A N E Y + + G P R + +VTN+ + T +++ F++YG IK Sbjct: 23 LAQSRNRERITYDVVDEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIK 82 Query: 77 SCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQALEAPSHEKILRGRNL 124 + L + D+ + YA V + +A++A++ S++ L G+N+ Sbjct: 83 NIHLNL-DRRTGF--LKGYALVEYETQKEANEAID-QSNDTDLLGQNV 126 >U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (splicing factor) protein6, isoform c protein. Length = 118 Score = 35.9 bits (79), Expect = 0.078 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 8/69 (11%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 K+YV LP T EL +F ++G I+ W+ + P P +AFV + + DA A Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA-------RRP-PGFAFVEYDDVRDAEDA 55 Query: 110 LEAPSHEKI 118 + A +I Sbjct: 56 VRALDGSRI 64 >U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (splicing factor) protein6, isoform b protein. Length = 153 Score = 35.9 bits (79), Expect = 0.078 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 8/69 (11%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 K+YV LP T EL +F ++G I+ W+ + P P +AFV + + DA A Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA-------RRP-PGFAFVEYDDVRDAEDA 55 Query: 110 LEAPSHEKI 118 + A +I Sbjct: 56 VRALDGSRI 64 >U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (splicing factor) protein6, isoform a protein. Length = 179 Score = 35.9 bits (79), Expect = 0.078 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 8/69 (11%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 K+YV LP T EL +F ++G I+ W+ + P P +AFV + + DA A Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVA-------RRP-PGFAFVEYDDVRDAEDA 55 Query: 110 LEAPSHEKI 118 + A +I Sbjct: 56 VRALDGSRI 64 >AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical protein C50D2.5 protein. Length = 138 Score = 35.9 bits (79), Expect = 0.078 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 6/63 (9%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 R LY+ NLP K T E+Y +F ++G ++ +++G+ + AFV + + DA Sbjct: 19 RILYIKNLPYKITTEEMYEIFGKFGAVRQ--IRVGNTAETRGT----AFVVYEDIFDAKT 72 Query: 109 ALE 111 A E Sbjct: 73 ACE 75 >Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical protein F46A9.6 protein. Length = 312 Score = 35.1 bits (77), Expect = 0.14 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 35 IRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT 94 + SV ++ + +R L+V+ LP ELY +F + LKM K N P Sbjct: 17 LNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSK--NGKPTSP 74 Query: 95 YAFVTFSNPADAHQA 109 FVTF + DA A Sbjct: 75 VGFVTFLSQQDAQDA 89 >Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical protein F46A9.6 protein. Length = 312 Score = 35.1 bits (77), Expect = 0.14 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 35 IRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT 94 + SV ++ + +R L+V+ LP ELY +F + LKM K N P Sbjct: 17 LNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSK--NGKPTSP 74 Query: 95 YAFVTFSNPADAHQA 109 FVTF + DA A Sbjct: 75 VGFVTFLSQQDAQDA 89 >Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical protein R74.5a protein. Length = 404 Score = 35.1 bits (77), Expect = 0.14 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 36 RSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTY 95 RS + + DG P R+L+V+N+P K +L +F + G + + ++G + Sbjct: 89 RSTSSSSTDG-P-RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK-----GF 141 Query: 96 AFVTFSNPADAHQALEAPSHEKILRGRNL 124 FVT NP DA +A A + + GR + Sbjct: 142 GFVTMQNPDDADRA-RAEFNGTTIEGRRV 169 >X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. Length = 312 Score = 35.1 bits (77), Expect = 0.14 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 35 IRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT 94 + SV ++ + +R L+V+ LP ELY +F + LKM K N P Sbjct: 17 LNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSK--NGKPTSP 74 Query: 95 YAFVTFSNPADAHQA 109 FVTF + DA A Sbjct: 75 VGFVTFLSQQDAQDA 89 >X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. Length = 312 Score = 35.1 bits (77), Expect = 0.14 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 35 IRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT 94 + SV ++ + +R L+V+ LP ELY +F + LKM K N P Sbjct: 17 LNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSK--NGKPTSP 74 Query: 95 YAFVTFSNPADAHQA 109 FVTF + DA A Sbjct: 75 VGFVTFLSQQDAQDA 89 >DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding protein ASD-1 protein. Length = 404 Score = 35.1 bits (77), Expect = 0.14 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Query: 36 RSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTY 95 RS + + DG P R+L+V+N+P K +L +F + G + + ++G + Sbjct: 89 RSTSSSSTDG-P-RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK-----GF 141 Query: 96 AFVTFSNPADAHQALEAPSHEKILRGRNL 124 FVT NP DA +A A + + GR + Sbjct: 142 GFVTMQNPDDADRA-RAEFNGTTIEGRRV 169 >Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical protein F18H3.3b protein. Length = 566 Score = 34.3 bits (75), Expect = 0.24 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 LY+ +L P + L+ F+ G + S +++ ++ + YA+V F PADA +AL Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLS--IRVCRDNTSRLSLG-YAYVNFQQPADAERAL 115 Query: 111 EAPSHEKILRGR 122 + + E ++ GR Sbjct: 116 DTMNFE-VIHGR 126 Score = 31.1 bits (67), Expect = 2.2 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 +++ NL +Y F+ +G I SC + D+G +K Y FV F A A+ Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSK----GYGFVHFETEHSAQTAI 202 Query: 111 E 111 E Sbjct: 203 E 203 >Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical protein F18H3.3a protein. Length = 692 Score = 34.3 bits (75), Expect = 0.24 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 LY+ +L P + L+ F+ G + S +++ ++ + YA+V F PADA +AL Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLS--IRVCRDNTSRLSLG-YAYVNFQQPADAERAL 115 Query: 111 EAPSHEKILRGR 122 + + E ++ GR Sbjct: 116 DTMNFE-VIHGR 126 Score = 31.1 bits (67), Expect = 2.2 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 +++ NL +Y F+ +G I SC + D+G +K Y FV F A A+ Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSK----GYGFVHFETEHSAQTAI 202 Query: 111 E 111 E Sbjct: 203 E 203 >U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (splicing factor) protein4, isoform a protein. Length = 196 Score = 34.3 bits (75), Expect = 0.24 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 5/113 (4%) Query: 48 IRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAH 107 + L + NL +TT +L F +YG I + DK ++ + FV F DA Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPR-DKYSRQS--KGFGFVRFYERRDAE 74 Query: 108 QALEAPSHEKILRGRNLYTSPADSWHQPVEDADGRVCWKPRFSRTNVRSRSRS 160 AL+ + K++ GR L + A + +P ++ GR R + R RSRS Sbjct: 75 HALDR-TDGKLVDGRELRVTLA-KYDRPSDERGGRGGGGGRRRSRSPRRRSRS 125 >U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna binding domain) containingprotein 7 protein. Length = 332 Score = 34.3 bits (75), Expect = 0.24 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Query: 39 PTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFV 98 P +ED P R L+V + +T+ ++L F YG IK + + G + YAF+ Sbjct: 96 PRASED--PYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPR----GYAFI 149 Query: 99 TFSNPADAHQALEAPSHEKI 118 +S+ A+ H A + K+ Sbjct: 150 EYSDKAEMHTAYKKADGIKV 169 >U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted in azoospermia)homolog protein 1 protein. Length = 498 Score = 33.9 bits (74), Expect = 0.32 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 28 LELAPYGIRS-VPTK-TEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDK 85 ++L P G + +P T + IP R ++V P TT TEL F ++ +K + Sbjct: 44 IQLYPTGAAALIPAPPTYELIPNR-IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD 102 Query: 86 GPNKTPIPTYAFVTFSNPADAHQALEAPSHEKILRGRNLYTSPA 129 G +K Y F+TF A + + + R R L PA Sbjct: 103 GQSKG----YGFITFETEDQAEEIRKLTPKQLEFRSRKLNLGPA 142 >AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical protein T08B2.5f protein. Length = 838 Score = 33.9 bits (74), Expect = 0.32 Identities = 20/64 (31%), Positives = 28/64 (43%) Query: 45 GIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPA 104 G+P KL + N+P T++ + G + M N I T+AFV FSN Sbjct: 133 GVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNRE 192 Query: 105 DAHQ 108 A Q Sbjct: 193 TAEQ 196 >AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical protein T08B2.5c protein. Length = 866 Score = 33.9 bits (74), Expect = 0.32 Identities = 20/64 (31%), Positives = 28/64 (43%) Query: 45 GIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPA 104 G+P KL + N+P T++ + G + M N I T+AFV FSN Sbjct: 161 GVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNRE 220 Query: 105 DAHQ 108 A Q Sbjct: 221 TAEQ 224 >AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical protein T08B2.5a protein. Length = 924 Score = 33.9 bits (74), Expect = 0.32 Identities = 20/64 (31%), Positives = 28/64 (43%) Query: 45 GIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPA 104 G+P KL + N+P T++ + G + M N I T+AFV FSN Sbjct: 219 GVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNRE 278 Query: 105 DAHQ 108 A Q Sbjct: 279 TAEQ 282 >AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical protein T08B2.5b protein. Length = 925 Score = 33.9 bits (74), Expect = 0.32 Identities = 20/64 (31%), Positives = 28/64 (43%) Query: 45 GIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPA 104 G+P KL + N+P T++ + G + M N I T+AFV FSN Sbjct: 220 GVPSNKLAILNMPNDVDNTKITLSLGKCGYLPQDVRTMTKFDKNTKQIRTFAFVEFSNRE 279 Query: 105 DAHQ 108 A Q Sbjct: 280 TAEQ 283 >AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. Length = 499 Score = 33.9 bits (74), Expect = 0.32 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 28 LELAPYGIRS-VPTK-TEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDK 85 ++L P G + +P T + IP R ++V P TT TEL F ++ +K + Sbjct: 45 IQLYPTGAAALIPAPPTYELIPNR-IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD 103 Query: 86 GPNKTPIPTYAFVTFSNPADAHQALEAPSHEKILRGRNLYTSPA 129 G +K Y F+TF A + + + R R L PA Sbjct: 104 GQSKG----YGFITFETEDQAEEIRKLTPKQLEFRSRKLNLGPA 143 >AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to drosophila sqd (squid)protein protein 1, isoform a protein. Length = 305 Score = 33.5 bits (73), Expect = 0.42 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 +K++V + P+ +L F QYG + +K D+ ++ +AFV F+ Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY-DRTNGRS--RGFAFVEFTTGEGCKL 85 Query: 109 ALEAPSHEKILRGRNLYTSPADS 131 AL A E+ ++G+++ PA S Sbjct: 86 ALAA--REQTIKGKSVEVKPAKS 106 >AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to drosophila sqd (squid)protein protein 1, isoform b protein. Length = 308 Score = 33.5 bits (73), Expect = 0.42 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 +K++V + P+ +L F QYG + +K D+ ++ +AFV F+ Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKY-DRTNGRS--RGFAFVEFTTGEGCKL 85 Query: 109 ALEAPSHEKILRGRNLYTSPADS 131 AL A E+ ++G+++ PA S Sbjct: 86 ALAA--REQTIKGKSVEVKPAKS 106 >L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical protein C02F5.7a protein. Length = 461 Score = 33.1 bits (72), Expect = 0.55 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Query: 423 LRRLNLSRNIHITNAVLKQIGQTCHKLEYLNEMDLCGCDGVSEEIVE 469 L L+L R +T+A + +G+ CHKL YLN L C +++ ++ Sbjct: 151 LEHLSLYRCKRVTDASCENLGRYCHKLNYLN---LENCSSITDRAMK 194 Score = 32.7 bits (71), Expect = 0.73 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 410 SDEFCEALTGLT-ELRRLNLSRNIHITNAVLKQIGQTCHKLEYLNEMDLCGCDGVSEEIV 468 +D CE L +L LNL IT+ +K IG C L YLN + CD + + V Sbjct: 163 TDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLN---ISWCDAIQDRGV 219 Query: 469 E 469 + Sbjct: 220 Q 220 >L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical protein C02F5.7b protein. Length = 466 Score = 33.1 bits (72), Expect = 0.55 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 3/47 (6%) Query: 423 LRRLNLSRNIHITNAVLKQIGQTCHKLEYLNEMDLCGCDGVSEEIVE 469 L L+L R +T+A + +G+ CHKL YLN L C +++ ++ Sbjct: 151 LEHLSLYRCKRVTDASCENLGRYCHKLNYLN---LENCSSITDRAMK 194 Score = 32.7 bits (71), Expect = 0.73 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 410 SDEFCEALTGLT-ELRRLNLSRNIHITNAVLKQIGQTCHKLEYLNEMDLCGCDGVSEEIV 468 +D CE L +L LNL IT+ +K IG C L YLN + CD + + V Sbjct: 163 TDASCENLGRYCHKLNYLNLENCSSITDRAMKYIGDGCPNLSYLN---ISWCDAIQDRGV 219 Query: 469 E 469 + Sbjct: 220 Q 220 >U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical protein F25B5.7d protein. Length = 374 Score = 32.3 bits (70), Expect = 0.96 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 11/75 (14%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 +L+V NLP + TEL +F+ +G I C+L KG +AF+ A A A Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--SGKG--------FAFLRLDTRAHAESA 166 Query: 110 LEAPSHEKILRGRNL 124 EA +I+ GR + Sbjct: 167 KEA-IDGRIIHGRQV 180 >U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical protein F25B5.7a protein. Length = 562 Score = 32.3 bits (70), Expect = 0.96 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 11/75 (14%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 +L+V NLP + TEL +F+ +G I C+L KG +AF+ A A A Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL--SGKG--------FAFLRLDTRAHAESA 166 Query: 110 LEAPSHEKILRGRNL 124 EA +I+ GR + Sbjct: 167 KEA-IDGRIIHGRQV 180 >Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical protein R10E9.1 protein. Length = 320 Score = 31.5 bits (68), Expect = 1.7 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 K+++ L +TT L F ++G + C + + P + F+TF +P+ + Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVM---RDPATKRARGFGFITFVDPSSVDKV 102 Query: 110 LEAPSHE 116 L HE Sbjct: 103 LNNREHE 109 >U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orientation defective protein4 protein. Length = 351 Score = 31.5 bits (68), Expect = 1.7 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%) Query: 37 SVPTKTEDGIPI--RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT 94 SV KT + ++YV+N+P +L +F YG + S + D+G Sbjct: 37 SVKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSK-----G 91 Query: 95 YAFVTFSNPADAHQALEAPSHEKILRGR 122 + FVT + +A A HE ++GR Sbjct: 92 FGFVTLDSIESCEKA-RAALHESHVQGR 118 >AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical protein F29C4.7b protein. Length = 423 Score = 31.5 bits (68), Expect = 1.7 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 14/80 (17%) Query: 41 KTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT---YAF 97 K +D R L+V N+P E+ VF ++G ++ + KTPI T YAF Sbjct: 161 KQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI--------KTPINTDAAYAF 212 Query: 98 VTFSNPADAHQALEAPSHEK 117 V F QA++A + E+ Sbjct: 213 VMFQT---VDQAIQAKAEEQ 229 >AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical protein F29C4.7a protein. Length = 520 Score = 31.5 bits (68), Expect = 1.7 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 14/80 (17%) Query: 41 KTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT---YAF 97 K +D R L+V N+P E+ VF ++G ++ + KTPI T YAF Sbjct: 161 KQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI--------KTPINTDAAYAF 212 Query: 98 VTFSNPADAHQALEAPSHEK 117 V F QA++A + E+ Sbjct: 213 VMFQT---VDQAIQAKAEEQ 229 >AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical protein F29C4.7c protein. Length = 497 Score = 31.5 bits (68), Expect = 1.7 Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 14/80 (17%) Query: 41 KTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT---YAF 97 K +D R L+V N+P E+ VF ++G ++ + KTPI T YAF Sbjct: 138 KQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDI--------KTPINTDAAYAF 189 Query: 98 VTFSNPADAHQALEAPSHEK 117 V F QA++A + E+ Sbjct: 190 VMFQT---VDQAIQAKAEEQ 206 >AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor protein 12 protein. Length = 248 Score = 31.5 bits (68), Expect = 1.7 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 K++V LP T+ L+ F Q+G I+ + + D+ K+ Y FVT + A A +A Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEA-VVITDRNTQKS--RGYGFVTMKDRASAERA 92 Query: 110 LEAPSHEKILRGR 122 + P+ I+ GR Sbjct: 93 CKDPN--PIIDGR 103 >AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. Length = 351 Score = 31.5 bits (68), Expect = 1.7 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%) Query: 37 SVPTKTEDGIPI--RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT 94 SV KT + ++YV+N+P +L +F YG + S + D+G Sbjct: 37 SVKPKTREPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSK-----G 91 Query: 95 YAFVTFSNPADAHQALEAPSHEKILRGR 122 + FVT + +A A HE ++GR Sbjct: 92 FGFVTLDSIESCEKA-RAALHESHVQGR 118 >AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-binding protein MSI-1 protein. Length = 320 Score = 31.5 bits (68), Expect = 1.7 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 K+++ L +TT L F ++G + C + + P + F+TF +P+ + Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVM---RDPATKRARGFGFITFVDPSSVDKV 102 Query: 110 LEAPSHE 116 L HE Sbjct: 103 LNNREHE 109 >U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (splicing factor) protein4, isoform b protein. Length = 126 Score = 31.1 bits (67), Expect = 2.2 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%) Query: 48 IRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAH 107 + L + NL +TT +L F +YG I + DK ++ + FV F DA Sbjct: 18 LTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPR-DKYSRQS--KGFGFVRFYERRDAE 74 Query: 108 QALEAPSHEKILRGRNLYTSPADSWHQPVEDADGR 142 AL+ + K++ GR L + A + +P ++ GR Sbjct: 75 HALDR-TDGKLVDGRELRVTLA-KYDRPSDERGGR 107 >AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical protein H28G03.1b protein. Length = 315 Score = 30.7 bits (66), Expect = 2.9 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 48 IRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAH 107 +RKL++ L TT +L F+Q+G + + + PN + FVTF++ A Sbjct: 48 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDA---IVIRDPNTKHSRGFGFVTFASIFSAE 104 Query: 108 QALEAPSHE 116 A+ H+ Sbjct: 105 SAMNDRPHK 113 >AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical protein H28G03.1c protein. Length = 335 Score = 30.7 bits (66), Expect = 2.9 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 48 IRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAH 107 +RKL++ L TT +L F+Q+G + + + PN + FVTF++ A Sbjct: 68 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDA---IVIRDPNTKHSRGFGFVTFASIFSAE 124 Query: 108 QALEAPSHE 116 A+ H+ Sbjct: 125 SAMNDRPHK 133 >AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical protein H28G03.1a protein. Length = 336 Score = 30.7 bits (66), Expect = 2.9 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Query: 48 IRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAH 107 +RKL++ L TT +L F+Q+G + + + PN + FVTF++ A Sbjct: 69 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDA---IVIRDPNTKHSRGFGFVTFASIFSAE 125 Query: 108 QALEAPSHE 116 A+ H+ Sbjct: 126 SAMNDRPHK 134 >AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical protein Y73B6BL.33 protein. Length = 610 Score = 30.7 bits (66), Expect = 2.9 Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 11/112 (9%) Query: 37 SVPTKTEDGIPIRKLYVT--NLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPT 94 S+PTK G P R Y+ LP T +++ FA + + ++ + PN Sbjct: 50 SMPTKISSGEPPRSQYIRLRGLPFNATEKDIHEFFAGLTIERVKFVCTTGR-PNGE---- 104 Query: 95 YAFVTFSNPADAHQALEAPSHEKILRGRNLYTSPADSWH---QPVEDADGRV 143 A+V F N +A +A+E E R ++T AD +P D++G V Sbjct: 105 -AYVEFKNTEEAGKAMENDRKEISNRYIEVFTVEADEAEFEFRPDPDSNGEV 155 >Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical protein R05H10.2 protein. Length = 608 Score = 30.3 bits (65), Expect = 3.9 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQA 109 +L + NLP KT + +L + + G L K P KT + F+ F ADA + Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDP-KT-CAGFGFIQFVEKADAEKG 153 Query: 110 LEAPSHEKILRGRNL 124 E + K+L GR++ Sbjct: 154 REFFNTNKVL-GRSV 167 >U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical protein F25B5.7b protein. Length = 165 Score = 30.3 bits (65), Expect = 3.9 Identities = 13/31 (41%), Positives = 20/31 (64%) Query: 50 KLYVTNLPPKTTRTELYGVFAQYGLIKSCWL 80 +L+V NLP + TEL +F+ +G I C+L Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL 147 >D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein protein. Length = 346 Score = 30.3 bits (65), Expect = 3.9 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 18 HVVRIATISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKS 77 H++ T+ P R ++E + ++LYV+ + T L F +YG + Sbjct: 86 HIIDGKTVDPKRAVP---RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142 Query: 78 CWLKMGDKGPNKTPIPTYAFVTFSNPADAHQALEAPSH 115 + + DK K + FVTF + Q + SH Sbjct: 143 SEIIL-DKATQKP--RGFGFVTFDDHDSVDQCVLQKSH 177 >AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform b protein. Length = 309 Score = 30.3 bits (65), Expect = 3.9 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 18 HVVRIATISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKS 77 H++ T+ P R ++E + ++LYV+ + T L F +YG + Sbjct: 48 HIIDGKTVDPKRAVP---RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 104 Query: 78 CWLKMGDKGPNKTPIPTYAFVTFSNPADAHQALEAPSH 115 + + DK K + FVTF + Q + SH Sbjct: 105 SEIIL-DKATQKP--RGFGFVTFDDHDSVDQCVLQKSH 139 >AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform c protein. Length = 308 Score = 30.3 bits (65), Expect = 3.9 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 18 HVVRIATISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKS 77 H++ T+ P R ++E + ++LYV+ + T L F +YG + Sbjct: 48 HIIDGKTVDPKRAVP---RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 104 Query: 78 CWLKMGDKGPNKTPIPTYAFVTFSNPADAHQALEAPSH 115 + + DK K + FVTF + Q + SH Sbjct: 105 SEIIL-DKATQKP--RGFGFVTFDDHDSVDQCVLQKSH 139 >AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform d protein. Length = 347 Score = 30.3 bits (65), Expect = 3.9 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 18 HVVRIATISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKS 77 H++ T+ P R ++E + ++LYV+ + T L F +YG + Sbjct: 86 HIIDGKTVDPKRAVP---RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142 Query: 78 CWLKMGDKGPNKTPIPTYAFVTFSNPADAHQALEAPSH 115 + + DK K + FVTF + Q + SH Sbjct: 143 SEIIL-DKATQKP--RGFGFVTFDDHDSVDQCVLQKSH 177 >AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1 homolog protein1, isoform a protein. Length = 346 Score = 30.3 bits (65), Expect = 3.9 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 6/98 (6%) Query: 18 HVVRIATISNLELAPYGIRSVPTKTEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKS 77 H++ T+ P R ++E + ++LYV+ + T L F +YG + Sbjct: 86 HIIDGKTVDPKRAVP---RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTK 142 Query: 78 CWLKMGDKGPNKTPIPTYAFVTFSNPADAHQALEAPSH 115 + + DK K + FVTF + Q + SH Sbjct: 143 SEIIL-DKATQKP--RGFGFVTFDDHDSVDQCVLQKSH 177 >Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical protein Y57G11A.5 protein. Length = 121 Score = 29.9 bits (64), Expect = 5.1 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 19/89 (21%) Query: 41 KTEDGIPIRKLYVTNLPPKTTRTELYG-----------VFAQYGLIKSCWLKMGDKGPNK 89 K + + R++YV N+P T EL VF+ G IKS W+ K Sbjct: 9 KRKRNVENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMA-------K 61 Query: 90 TPIPTYAFVTFSNPADAHQALEAPSHEKI 118 P P +AFVTF A A++ + +KI Sbjct: 62 RP-PGFAFVTFKRTVHAFDAVKYLNGKKI 89 >Z77652-2|CAB01113.1| 665|Caenorhabditis elegans Hypothetical protein C06B3.2 protein. Length = 665 Score = 29.9 bits (64), Expect = 5.1 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 335 PPQLSSLSFYNCYSLQGTVLSAAMDSLPNLTTLKLDLCPAAMWK 378 PP + + FY Y+L + SL N T L+++ C A+ W+ Sbjct: 364 PPYIIFIGFYAVYALY--IQGPLAASLFNFTVLQVEACKASWWR 405 >AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical protein Y46G5A.13 protein. Length = 434 Score = 29.9 bits (64), Expect = 5.1 Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 7/90 (7%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 R L+V NL P T L +F Q G + K+ +G N YAFV FS+ A Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKA--KIIFEGLNDP----YAFVEFSDHNQATL 93 Query: 109 ALEAPSHEKILRGRNLYTSPADSWHQPVED 138 AL++ + ++L + ++ + A +P E+ Sbjct: 94 ALQSHNGRELLE-KEMHVTWAFEPREPGEN 122 >AF025460-5|AAB70988.5| 584|Caenorhabditis elegans Polh (dna polymerase eta) homologprotein 1 protein. Length = 584 Score = 29.9 bits (64), Expect = 5.1 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 42 TEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPI 92 TEDG P + L +T+ P T +++ A GL K+ K D GP PI Sbjct: 370 TEDGKPQKTLKITSYHPDTLFEQIWA--AMKGLNKTNATKNEDSGPWTPPI 418 >AB244413-1|BAE72703.1| 584|Caenorhabditis elegans DNA polymerase eta protein. Length = 584 Score = 29.9 bits (64), Expect = 5.1 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Query: 42 TEDGIPIRKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPI 92 TEDG P + L +T+ P T +++ A GL K+ K D GP PI Sbjct: 370 TEDGKPQKTLKITSYHPDTLFEQIWA--AMKGLNKTNATKNEDSGPWTPPI 418 >Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical protein R06C1.4 protein. Length = 84 Score = 29.5 bits (63), Expect = 6.8 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Query: 51 LYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQAL 110 +YV N+P + T E+ FA G + + + + D+ + +AFV FS A A +A+ Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRI-VYDRETGRP--RGFAFVEFSEEAGAQRAV 64 Query: 111 EAPSHEKILRGRNLYTSPAD 130 E + GRNL + A+ Sbjct: 65 E-QLNGVAFNGRNLRVNYAN 83 >U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical protein C18A3.5a protein. Length = 408 Score = 29.5 bits (63), Expect = 6.8 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 6/71 (8%) Query: 49 RKLYVTNLPPKTTRTELYGVFAQYGLIKSCWLKMGDKGPNKTPIPTYAFVTFSNPADAHQ 108 R LYV NL T + +F Q G + K+ G N YAFV FS+ A Q Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKT--KVIFDGSNDP----YAFVEFSDHGQASQ 99 Query: 109 ALEAPSHEKIL 119 AL+ + +L Sbjct: 100 ALQTMNKRLLL 110 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.320 0.134 0.409 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,369,028 Number of Sequences: 27539 Number of extensions: 467116 Number of successful extensions: 1219 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 50 Number of HSP's that attempted gapping in prelim test: 1150 Number of HSP's gapped (non-prelim): 110 length of query: 577 length of database: 12,573,161 effective HSP length: 85 effective length of query: 492 effective length of database: 10,232,346 effective search space: 5034314232 effective search space used: 5034314232 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.8 bits) S2: 62 (29.1 bits)
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