Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001474-TA|BGIBMGA001474-PA|IPR013025|Ribosomal protein
L25/L23, IPR012678|Ribosomal L23 and L15e, core
(150 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 31 0.33
At5g43660.1 68418.m05336 expressed protein similar to unknown pr... 30 0.57
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 30 0.57
At4g37280.1 68417.m05276 MRG family protein contains Pfam domain... 30 0.76
At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein, chl... 29 1.0
At2g34220.1 68415.m04187 hypothetical protein contains Pfam prof... 29 1.7
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 29 1.7
At1g10450.1 68414.m01176 paired amphipathic helix repeat-contain... 29 1.7
At5g63490.1 68418.m07970 CBS domain-containing protein / octicos... 28 3.1
At5g18730.1 68418.m02222 hypothetical protein predicted proteins... 28 3.1
At4g33330.1 68417.m04740 glycogenin glucosyltransferase (glycoge... 28 3.1
At3g05390.1 68416.m00589 expressed protein ; expression supporte... 27 5.3
At1g78210.1 68414.m09114 hydrolase, alpha/beta fold family prote... 27 5.3
At4g35920.3 68417.m05107 expressed protein contains Pfam profile... 27 7.1
At4g35920.2 68417.m05106 expressed protein contains Pfam profile... 27 7.1
At4g35920.1 68417.m05105 expressed protein contains Pfam profile... 27 7.1
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 27 7.1
At3g11800.1 68416.m01446 expressed protein 27 7.1
At2g30840.1 68415.m03760 2-oxoglutarate-dependent dioxygenase, p... 27 7.1
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 26 9.3
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 26 9.3
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 26 9.3
At4g13780.1 68417.m02137 methionine--tRNA ligase, putative / met... 26 9.3
At3g62120.2 68416.m06980 tRNA synthetase class II (G, H, P and S... 26 9.3
At3g62120.1 68416.m06979 tRNA synthetase class II (G, H, P and S... 26 9.3
At3g26030.1 68416.m03242 serine/threonine protein phosphatase 2A... 26 9.3
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 31.1 bits (67), Expect = 0.33
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 39 VHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKIN----MGKFKKDVVKGYVIKEDDVKVA 94
VH HC+ D+++ L K + +V TK G + + Y IK+ K A
Sbjct: 119 VHIHCAQ--CDKDLQHKLLKHKAIHIVKTDTKAQTLTVQGTIESAKLLAY-IKKKVHKHA 175
Query: 95 FVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKK-NFRKYIDHNKSR 141
+ KT K + +K EEE+ K DE KK +K + NK +
Sbjct: 176 EIISSKTEEEKKKEEEDKKKKEEEDKKKKEDEKKKEEEKKKEEENKKK 223
>At5g43660.1 68418.m05336 expressed protein similar to unknown
protein (gb|AAB72163.1)
Length = 361
Score = 30.3 bits (65), Expect = 0.57
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 52 IKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKY--PDL 109
+ NY + E+ +D + + + F+K V + +E ++ F P FK PD
Sbjct: 81 MSNYQPRFRELYKLDPESLL-LPCFRKAVREN--TEESFRRIMFEPFPGVYVFKMFQPDF 137
Query: 110 FEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
F+K + E E K L E+K RK +NKS+
Sbjct: 138 FQKLLVEVENMRKWLHEAKLMIRK--PNNKSK 167
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 30.3 bits (65), Expect = 0.57
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 83 GYVIKEDDVKVAFVTLPKTMTFKY-PDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
G +++D K+ ++ L +++ + PD NE+ E +K +D+ K+ F D ++S+
Sbjct: 47 GKALEDDLHKIDYMILFESLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSESK 106
>At4g37280.1 68417.m05276 MRG family protein contains Pfam domain
PF05712: MRG
Length = 320
Score = 29.9 bits (64), Expect = 0.76
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 105 KYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSRPDIPS 146
K PDLF +N EEE + ++ +F K+I N+S +PS
Sbjct: 263 KLPDLFSY-VNMEEETWSRMQQTLSDFLKFIQKNQSTFLLPS 303
>At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein,
chloroplast SP:Q9SW33;GI:17369630;PMID:11719511; similar
to expressed protein gi:12321169 {Oryza sativa}
Length = 225
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 67 VRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDE 126
V ++ G F +DV++ +++K+D V + T + + F S +EE K +D+
Sbjct: 155 VEAEVEGGGFSRDVME-FLVKQDVVAYRCMATKVTFVYPFTTAFGDSKGQEERLKKLIDQ 213
>At2g34220.1 68415.m04187 hypothetical protein contains Pfam
profiles PF04780: Protein of unknown function (DUF629),
PF04781: Protein of unknown function (DUF627)
Length = 718
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 86 IKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLD 125
+ DDVK + +TL K++ K+P + K + + + K +D
Sbjct: 627 VPNDDVKKSLLTLRKSLKEKFPLIDSKILQNKSTYEKLID 666
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 28.7 bits (61), Expect = 1.7
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 56 LEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSIN 115
L+K P D+ TK+++ K KKDV+ V KE VK +PK + S +
Sbjct: 20 LKKGKREPEDDIDTKVSLKKQKKDVIAA-VQKEKAVK----KVPKKVESSDD---SDSES 71
Query: 116 EEEEHAKSLDESK 128
EEEE AK + K
Sbjct: 72 EEEEKAKKVPAKK 84
>At1g10450.1 68414.m01176 paired amphipathic helix repeat-containing
protein similar to Sin3 protein [Yarrowia lipolytica]
GI:18076824; contains Pfam profile PF02671: Paired
amphipathic helix repeat
Length = 1173
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 112 KSINEEEEHAKSLDESKKNFRKYIDHNKSRP 142
KS+N+EE H L+ +KK F +D ++ P
Sbjct: 1074 KSVNDEENHGLFLNRNKKKFTS-LDESRGMP 1103
>At5g63490.1 68418.m07970 CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein contains Pfam profiles: PF00571 CBS domain,
PF00564: PB1 domain
Length = 543
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 107 PDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKS 140
PD F + + E+E+H K L S + + I+H KS
Sbjct: 443 PDNFPQILYEDEDHDKVLLASDSDLQAAIEHAKS 476
>At5g18730.1 68418.m02222 hypothetical protein predicted proteins -
Arabidopsis thaliana
Length = 644
Score = 27.9 bits (59), Expect = 3.1
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 56 LEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSIN 115
++ + + PV D R + F+ Y EDD T+PKT ++ + +
Sbjct: 561 VQLLTQQPVSDDRNDMEHRLFR--ACTEYTSNEDDGSEPIFTIPKTERIRFSNKVPATRV 618
Query: 116 EEEEHAKSLDESKKNFR 132
+E + + D SK FR
Sbjct: 619 TKEMYGELEDNSKVEFR 635
>At4g33330.1 68417.m04740 glycogenin glucosyltransferase
(glycogenin)-related similar to glycogenin
glucosyltransferase (glycogenin-1) (EC 2.4.1.186) from
Homo sapiens [SP|P46976], Mus musculus [SP|Q9R062],
Oryctolagus cuniculus [GI:165513]; contains Pfam profile
PF01501: Glycosyl transferase family 8
Length = 593
Score = 27.9 bits (59), Expect = 3.1
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 48 TKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYP 107
TK + +++E+I + +TKI M ++ + + + V + F + K FK+
Sbjct: 87 TKLEAPSFMEEILTRGLG--KTKIGMVNMEECDLTNWKRYGETVHIHFERVSKL--FKWQ 142
Query: 108 DLFEKSINEEEE 119
DLF + I+EEEE
Sbjct: 143 DLFPEWIDEEEE 154
>At3g05390.1 68416.m00589 expressed protein ; expression supported
by MPSS
Length = 463
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 105 KYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKSRP 142
K +L+EK ++ KS D SKK +K+++ +P
Sbjct: 79 KMDNLYEKLEKTVKDMEKSKDGSKKEMKKFLEDEVMKP 116
>At1g78210.1 68414.m09114 hydrolase, alpha/beta fold family
protein low similarity to hydrolases from Rhodococcus
sp. EtbD2 GI:3273241, EtbD1 GI:3273239; contains Pfam
profile PF00561: hydrolase, alpha/beta fold family
Length = 314
Score = 27.1 bits (57), Expect = 5.3
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 22 NFWMKLVRPHPKQLPNIVHFH---CSMEMTKYDIKNYLEKIYEVPVVDV 67
NFW+ +P K PN++ H + YD+ L + + + + D+
Sbjct: 38 NFWVSKTKPESKPKPNLLLIHGLGATAIWQWYDVARRLSRYFNLYIPDL 86
>At4g35920.3 68417.m05107 expressed protein contains Pfam profile
PF04749: Protein of unknown function, DUF614; isoform
contains AT-acceptor splice site at intron 8
Length = 421
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 81 VKGYVIKEDDVKVAFVTLPKTMTFKYPDL-FEKSINEEEEHAK-SLDESKKNF 131
V+ ++K++ + A L KT++ YP+L F +++ E E + L S++++
Sbjct: 159 VQDVILKQESTREAASVLKKTLSCSYPNLRFCEALKTENEKLQIELQRSQEHY 211
>At4g35920.2 68417.m05106 expressed protein contains Pfam profile
PF04749: Protein of unknown function, DUF614; isoform
contains AT-acceptor splice site at intron 8
Length = 421
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 81 VKGYVIKEDDVKVAFVTLPKTMTFKYPDL-FEKSINEEEEHAK-SLDESKKNF 131
V+ ++K++ + A L KT++ YP+L F +++ E E + L S++++
Sbjct: 159 VQDVILKQESTREAASVLKKTLSCSYPNLRFCEALKTENEKLQIELQRSQEHY 211
>At4g35920.1 68417.m05105 expressed protein contains Pfam profile
PF04749: Protein of unknown function, DUF614; isoform
contains AT-acceptor splice site at intron 8
Length = 421
Score = 26.6 bits (56), Expect = 7.1
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 81 VKGYVIKEDDVKVAFVTLPKTMTFKYPDL-FEKSINEEEEHAK-SLDESKKNF 131
V+ ++K++ + A L KT++ YP+L F +++ E E + L S++++
Sbjct: 159 VQDVILKQESTREAASVLKKTLSCSYPNLRFCEALKTENEKLQIELQRSQEHY 211
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 83 GYVIKEDDVKVAFVTL--PKTMTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKS 140
G +++D K+ ++ L + + PD NE+ E +K +D+ K+ F D ++S
Sbjct: 47 GKALEDDLHKIDYMILFESRLLLRISPDADPNQSNEQTEQSKQIDDKKQEFCGIQDSSES 106
Query: 141 R 141
+
Sbjct: 107 K 107
>At3g11800.1 68416.m01446 expressed protein
Length = 246
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 40 HFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLP 99
H H S+ ++ + K+ E+ ++ + T + F+ D KGY++ K A +LP
Sbjct: 71 HRHLSLNGNS-EVAVFRPKVDEITLLTINTS-SSSSFRPDASKGYMVAFAGAKYAARSLP 128
>At2g30840.1 68415.m03760 2-oxoglutarate-dependent dioxygenase,
putative similar to 2A6 (GI:599622) and tomato ethylene
synthesis regulatory protein E8 (SP|P10967)
Length = 362
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 78 KDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFE 111
KD ++G+ ++ DV+ F T T T KY F+
Sbjct: 107 KDGIRGFHEQDSDVRKKFYTRDVTKTVKYNSNFD 140
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 26.2 bits (55), Expect = 9.3
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 87 KEDDVKVAFVTLPKTMTFK---YPDL-FEKSINEEEEHAKSLDESKKNFRKYID 136
K+D V+V F K +PD E EEEE + +DES K + ID
Sbjct: 759 KDDSVEVIFKMWESCQIEKKEAFPDKKSELESQEEEEDSSKIDESDKTSTENID 812
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 26.2 bits (55), Expect = 9.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 61 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVA-FVTLPKTMTFKYPDL 109
+ P+V V ++ K+ DVV Y++K+ + V FV+ PK + + D+
Sbjct: 217 DAPIVPVSAQL---KYNIDVVSEYIVKKIPIPVRDFVSPPKMIVIRSFDV 263
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 26.2 bits (55), Expect = 9.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 61 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVA-FVTLPKTMTFKYPDL 109
+ P+V V ++ K+ DVV Y++K+ + V FV+ PK + + D+
Sbjct: 217 DAPIVPVSAQL---KYNIDVVSEYIVKKIPIPVRDFVSPPKMIVIRSFDV 263
>At4g13780.1 68417.m02137 methionine--tRNA ligase, putative /
methionyl-tRNA synthetase, putative / MetRS, putative
similar to methionyl-tRNA synthetase [Oryza sativa]
GI:4091008; contains Pfam profiles PF00133: tRNA
synthetases class I (I, L, M and V), PF01588: Putative
tRNA binding domain
Length = 797
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 51 DIKNYLEKIYEVPVVDVRTKINMGKFKKDV 80
D+ N +K++E +VD+ TK N+ KDV
Sbjct: 748 DVLNPKKKVWETLLVDLNTKENLVACYKDV 777
>At3g62120.2 68416.m06980 tRNA synthetase class II (G, H, P and S)
family protein similar to SP|P07814 Bifunctional
aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA
synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase);
Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA
ligase)] {Homo sapiens}; contains Pfam profiles PF00587:
tRNA synthetase class II core domain (G, H, P, S and T),
PF03129: Anticodon binding domain
Length = 530
Score = 26.2 bits (55), Expect = 9.3
Identities = 18/81 (22%), Positives = 34/81 (41%)
Query: 27 LVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVI 86
++RP + I+ E+ K +KN ++ P V + K ++ F +V
Sbjct: 81 ILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKS 140
Query: 87 KEDDVKVAFVTLPKTMTFKYP 107
+ D++V P + T YP
Sbjct: 141 GKSDLEVPIAIRPTSETVMYP 161
>At3g62120.1 68416.m06979 tRNA synthetase class II (G, H, P and S)
family protein similar to SP|P07814 Bifunctional
aminoacyl-tRNA synthetase [Includes: Glutamyl-tRNA
synthetase (EC 6.1.1.17) (Glutamate--tRNA ligase);
Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA
ligase)] {Homo sapiens}; contains Pfam profiles PF00587:
tRNA synthetase class II core domain (G, H, P, S and T),
PF03129: Anticodon binding domain
Length = 530
Score = 26.2 bits (55), Expect = 9.3
Identities = 18/81 (22%), Positives = 34/81 (41%)
Query: 27 LVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVI 86
++RP + I+ E+ K +KN ++ P V + K ++ F +V
Sbjct: 81 ILRPWSMAIWEIMQIFFDAEIKKMKVKNCYFPLFVSPGVLEKEKDHIEGFAPEVAWVTKS 140
Query: 87 KEDDVKVAFVTLPKTMTFKYP 107
+ D++V P + T YP
Sbjct: 141 GKSDLEVPIAIRPTSETVMYP 161
>At3g26030.1 68416.m03242 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 477
Score = 26.2 bits (55), Expect = 9.3
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 100 KTMTFKYPDLFEKSINE-EEEHAKSLDESKKN 130
K ++ PDLFE+ +++ +E+ K+ D KKN
Sbjct: 430 KVLSDTNPDLFEECLHKFQEDQQKAEDTKKKN 461
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,012,275
Number of Sequences: 28952
Number of extensions: 171467
Number of successful extensions: 494
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 483
Number of HSP's gapped (non-prelim): 26
length of query: 150
length of database: 12,070,560
effective HSP length: 75
effective length of query: 75
effective length of database: 9,899,160
effective search space: 742437000
effective search space used: 742437000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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