Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001474-TA|BGIBMGA001474-PA|IPR013025|Ribosomal protein
L25/L23, IPR012678|Ribosomal L23 and L15e, core
(150 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 27 0.069
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 1.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 1.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 1.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 1.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 1.5
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 23 1.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 1.5
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 2.0
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 20 7.9
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 27.1 bits (57), Expect = 0.069
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 97 TLPKTMTFKYPDLFEKSINEEEEHAKSLDESK-KNFRKYIDHNKSRPDI 144
TL T+T Y +K +E E + K LDE K + I+ N +PDI
Sbjct: 392 TLIATVTVNYYRHKQKRRDERERYFKGLDEEKLPESGENIEINLIKPDI 440
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 263 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 292
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 263 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 292
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 263 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 292
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 219 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 248
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 263 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 292
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 51 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 80
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 1.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 263 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 292
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 22.2 bits (45), Expect = 2.0
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 44 SMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKK--DVVKGYVIKEDDVKVAFVTLPKT 101
S E +Y Y + Y V+ K +G F + DVV G ++E V L +
Sbjct: 406 SPESRQYTAFLYNGRSYTYQVLPFGLKTAVGSFSRAMDVVLGTEVREFVVNYIDDLLVAS 465
Query: 102 MTFKYPDLFEKSINEEEEHAKSLDESKKNFRKYIDHNKS 140
T +NE EH + + E K R I+ KS
Sbjct: 466 ET----------LNEHLEHLRQVFEKLKQARMTINLEKS 494
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 20.2 bits (40), Expect = 7.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 33 KQLPNIVHFHCSMEMTKYDIKN 54
++ PNI H CS + T + N
Sbjct: 9 RESPNIDHNSCSSDDTVLSVGN 30
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,096
Number of Sequences: 317
Number of extensions: 1689
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 150
length of database: 114,650
effective HSP length: 52
effective length of query: 98
effective length of database: 98,166
effective search space: 9620268
effective search space used: 9620268
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)
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