GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001474-TA|BGIBMGA001474-PA|IPR013025|Ribosomal protein
L25/L23, IPR012678|Ribosomal L23 and L15e, core
         (150 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles ...    23   4.2  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   5.5  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   5.5  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    22   7.3  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    22   9.6  

>U50471-1|AAA93474.1|  135|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S8 mRNA, complete cds.
           ).
          Length = 135

 Score = 23.0 bits (47), Expect = 4.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKS 140
           ++ +   EE   S   +K N RKY+   K+
Sbjct: 53  KRELKAGEEDVLSKKRTKSNLRKYVKRQKN 82


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 67  VRTKINMGKFKKDVVKGYVIKEDDVKVAFVTL 98
           VRT +N    +   +K YV + D++   F+TL
Sbjct: 156 VRTIVNPVMMQPKTIKLYVDQVDEIAREFMTL 187


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 5.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 15  QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
           Q++++  N  MK  + H     NIV +H S
Sbjct: 323 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 352


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 22.2 bits (45), Expect = 7.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 43  CSMEMTKYDIKNY 55
           CS++M KYD+  Y
Sbjct: 162 CSLDMMKYDLTAY 174


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 75  KFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYP 107
           K  K++++   ++ D+      TLPKT+  +YP
Sbjct: 621 KVIKELIEEKKLRGDEAASVIATLPKTI--RYP 651


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,862
Number of Sequences: 2123
Number of extensions: 6485
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 150
length of database: 516,269
effective HSP length: 59
effective length of query: 91
effective length of database: 391,012
effective search space: 35582092
effective search space used: 35582092
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)