Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001474-TA|BGIBMGA001474-PA|IPR013025|Ribosomal protein
L25/L23, IPR012678|Ribosomal L23 and L15e, core
(150 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071415-1|AAL49037.1| 150|Drosophila melanogaster RE49852p pro... 224 3e-59
AE014296-445|AAF47639.1| 150|Drosophila melanogaster CG1320-PA ... 224 3e-59
BT001596-1|AAN71351.1| 540|Drosophila melanogaster RE28470p pro... 30 1.1
AE014296-2821|AAN11713.1| 540|Drosophila melanogaster CG32170-P... 30 1.1
M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein ( D.me... 29 3.5
M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me... 29 3.5
J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein ( D.me... 29 3.5
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me... 29 3.5
AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p pro... 29 3.5
AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA... 29 3.5
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB... 29 3.5
AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-P... 29 3.5
AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-P... 29 3.5
BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p pro... 28 6.0
AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-P... 28 6.0
BT001385-1|AAN71140.1| 374|Drosophila melanogaster GH03795p pro... 27 8.0
AE014296-1720|AAF50217.1| 374|Drosophila melanogaster CG18178-P... 27 8.0
>AY071415-1|AAL49037.1| 150|Drosophila melanogaster RE49852p
protein.
Length = 150
Score = 224 bits (548), Expect = 3e-59
Identities = 97/150 (64%), Positives = 120/150 (80%)
Query: 1 MSTRWYPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIY 60
MSTRWYPIYQRGNPQLRVFLPNFWMKL+RP +Q PN+V F SMEMTKYD++NYLEKIY
Sbjct: 1 MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60
Query: 61 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 120
++PVVDVRT+I MG+ KKD GY+ K+DDVK+A+VTLP+ +F +PD F + ++ +
Sbjct: 61 KLPVVDVRTRIAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKE 120
Query: 121 AKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
KSLDESK FR+++D NK RP P WFSI
Sbjct: 121 EKSLDESKAGFRRFLDRNKKRPGTPGWFSI 150
>AE014296-445|AAF47639.1| 150|Drosophila melanogaster CG1320-PA
protein.
Length = 150
Score = 224 bits (548), Expect = 3e-59
Identities = 97/150 (64%), Positives = 120/150 (80%)
Query: 1 MSTRWYPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIY 60
MSTRWYPIYQRGNPQLRVFLPNFWMKL+RP +Q PN+V F SMEMTKYD++NYLEKIY
Sbjct: 1 MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60
Query: 61 EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 120
++PVVDVRT+I MG+ KKD GY+ K+DDVK+A+VTLP+ +F +PD F + ++ +
Sbjct: 61 KLPVVDVRTRIAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKE 120
Query: 121 AKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
KSLDESK FR+++D NK RP P WFSI
Sbjct: 121 EKSLDESKAGFRRFLDRNKKRPGTPGWFSI 150
>BT001596-1|AAN71351.1| 540|Drosophila melanogaster RE28470p
protein.
Length = 540
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 98 LPKTMTFKYPDLFEKSINEEEEHAK----SLDESKKNFR-KYIDHNKSRPDIPSWF 148
L + T DL E EE+E K +L+ +K+FR + + K P P+WF
Sbjct: 201 LEQLKTHSNDDLLEDQQREEDEREKYKTVTLNSFRKSFRDRLLQQQKETPHNPAWF 256
>AE014296-2821|AAN11713.1| 540|Drosophila melanogaster CG32170-PA
protein.
Length = 540
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 98 LPKTMTFKYPDLFEKSINEEEEHAK----SLDESKKNFR-KYIDHNKSRPDIPSWF 148
L + T DL E EE+E K +L+ +K+FR + + K P P+WF
Sbjct: 201 LEQLKTHSNDDLLEDQQREEDEREKYKTVTLNSFRKSFRDRLLQQQKETPHNPAWF 256
>M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCencoded short protein mRNA, complete
cds. ).
Length = 1135
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
+EEH S++E + R Y DH P++P ++ +
Sbjct: 50 DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79
>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCencoded long protein mRNA, complete
cds. ).
Length = 1501
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
+EEH S++E + R Y DH P++P ++ +
Sbjct: 50 DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79
>J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1135
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
+EEH S++E + R Y DH P++P ++ +
Sbjct: 50 DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79
>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1501
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
+EEH S++E + R Y DH P++P ++ +
Sbjct: 50 DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79
>AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p
protein.
Length = 1135
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
+EEH S++E + R Y DH P++P ++ +
Sbjct: 50 DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79
>AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA,
isoform A protein.
Length = 1135
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
+EEH S++E + R Y DH P++P ++ +
Sbjct: 50 DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79
>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
isoform B protein.
Length = 1501
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
+EEH S++E + R Y DH P++P ++ +
Sbjct: 50 DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79
>AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-PC,
isoform C protein.
Length = 980
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 51 DIKNYLEKIYEVPVVD--VRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPD 108
D+K Y +I + ++ +R K++ K ++ + DD++ L +
Sbjct: 573 DVKKYRAEISHMKQIENELRQKLDANLTSKSTLQAKQKECDDLEKRIQELNNARHADMLN 632
Query: 109 L--FEKSINEEEEHAKSLD---ESKKNFRKYIDHNKSRPDIPS 146
L E+ +NEE +SLD ++K RK + +RP+ S
Sbjct: 633 LQTVERRLNEERRQKQSLDSQLSNEKKARKLAEEKAARPECSS 675
>AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-PA,
isoform A protein.
Length = 980
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 51 DIKNYLEKIYEVPVVD--VRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPD 108
D+K Y +I + ++ +R K++ K ++ + DD++ L +
Sbjct: 573 DVKKYRAEISHMKQIENELRQKLDANLTSKSTLQAKQKECDDLEKRIQELNNARHADMLN 632
Query: 109 L--FEKSINEEEEHAKSLD---ESKKNFRKYIDHNKSRPDIPS 146
L E+ +NEE +SLD ++K RK + +RP+ S
Sbjct: 633 LQTVERRLNEERRQKQSLDSQLSNEKKARKLAEEKAARPECSS 675
>BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p
protein.
Length = 1312
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 66 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKS--INEEEEHAKS 123
DV +++ K + KE +V + ++P Y DL I E++H +
Sbjct: 788 DVAADLSIKKVRLPAQAAASAKESEVGESTKSIPSPPLTPYGDLRPVGLCIKTEQDHEQE 847
Query: 124 LDESKKNFRKYIDHNKSRPD 143
LD+ + RK + PD
Sbjct: 848 LDQEQGQERKREQEQEPEPD 867
>AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-PA
protein.
Length = 1311
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Query: 66 DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKS--INEEEEHAKS 123
DV +++ K + KE +V + ++P Y DL I E++H +
Sbjct: 787 DVAADLSIKKVRLPAQAAASAKESEVGESTKSIPSPPLTPYGDLRPVGLCIKTEQDHEQE 846
Query: 124 LDESKKNFRKYIDHNKSRPD 143
LD+ + RK + PD
Sbjct: 847 LDQEQGQERKREQEQEPEPD 866
>BT001385-1|AAN71140.1| 374|Drosophila melanogaster GH03795p
protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 64 VVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKT 101
+VD ++K + + KD+ K + K+D K FV+LPKT
Sbjct: 141 LVDFKSKEDRDQAFKDI-KASIEKDDKHKGLFVSLPKT 177
>AE014296-1720|AAF50217.1| 374|Drosophila melanogaster CG18178-PA
protein.
Length = 374
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 64 VVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKT 101
+VD ++K + + KD+ K + K+D K FV+LPKT
Sbjct: 141 LVDFKSKEDRDQAFKDI-KASIEKDDKHKGLFVSLPKT 177
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,012,467
Number of Sequences: 52641
Number of extensions: 331800
Number of successful extensions: 1464
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1462
Number of HSP's gapped (non-prelim): 17
length of query: 150
length of database: 24,830,863
effective HSP length: 79
effective length of query: 71
effective length of database: 20,672,224
effective search space: 1467727904
effective search space used: 1467727904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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