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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001474-TA|BGIBMGA001474-PA|IPR013025|Ribosomal protein
L25/L23, IPR012678|Ribosomal L23 and L15e, core
         (150 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071415-1|AAL49037.1|  150|Drosophila melanogaster RE49852p pro...   224   3e-59
AE014296-445|AAF47639.1|  150|Drosophila melanogaster CG1320-PA ...   224   3e-59
BT001596-1|AAN71351.1|  540|Drosophila melanogaster RE28470p pro...    30   1.1  
AE014296-2821|AAN11713.1|  540|Drosophila melanogaster CG32170-P...    30   1.1  
M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein ( D.me...    29   3.5  
M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me...    29   3.5  
J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein ( D.me...    29   3.5  
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me...    29   3.5  
AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p pro...    29   3.5  
AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA...    29   3.5  
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB...    29   3.5  
AE013599-3144|AAM70856.1|  980|Drosophila melanogaster CG30389-P...    29   3.5  
AE013599-3143|AAF46685.2|  980|Drosophila melanogaster CG30389-P...    29   3.5  
BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p pro...    28   6.0  
AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-P...    28   6.0  
BT001385-1|AAN71140.1|  374|Drosophila melanogaster GH03795p pro...    27   8.0  
AE014296-1720|AAF50217.1|  374|Drosophila melanogaster CG18178-P...    27   8.0  

>AY071415-1|AAL49037.1|  150|Drosophila melanogaster RE49852p
           protein.
          Length = 150

 Score =  224 bits (548), Expect = 3e-59
 Identities = 97/150 (64%), Positives = 120/150 (80%)

Query: 1   MSTRWYPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIY 60
           MSTRWYPIYQRGNPQLRVFLPNFWMKL+RP  +Q PN+V F  SMEMTKYD++NYLEKIY
Sbjct: 1   MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60

Query: 61  EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 120
           ++PVVDVRT+I MG+ KKD   GY+ K+DDVK+A+VTLP+  +F +PD F +   ++ + 
Sbjct: 61  KLPVVDVRTRIAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKE 120

Query: 121 AKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
            KSLDESK  FR+++D NK RP  P WFSI
Sbjct: 121 EKSLDESKAGFRRFLDRNKKRPGTPGWFSI 150


>AE014296-445|AAF47639.1|  150|Drosophila melanogaster CG1320-PA
           protein.
          Length = 150

 Score =  224 bits (548), Expect = 3e-59
 Identities = 97/150 (64%), Positives = 120/150 (80%)

Query: 1   MSTRWYPIYQRGNPQLRVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIY 60
           MSTRWYPIYQRGNPQLRVFLPNFWMKL+RP  +Q PN+V F  SMEMTKYD++NYLEKIY
Sbjct: 1   MSTRWYPIYQRGNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIY 60

Query: 61  EVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEH 120
           ++PVVDVRT+I MG+ KKD   GY+ K+DDVK+A+VTLP+  +F +PD F +   ++ + 
Sbjct: 61  KLPVVDVRTRIAMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKE 120

Query: 121 AKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
            KSLDESK  FR+++D NK RP  P WFSI
Sbjct: 121 EKSLDESKAGFRRFLDRNKKRPGTPGWFSI 150


>BT001596-1|AAN71351.1|  540|Drosophila melanogaster RE28470p
           protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 98  LPKTMTFKYPDLFEKSINEEEEHAK----SLDESKKNFR-KYIDHNKSRPDIPSWF 148
           L +  T    DL E    EE+E  K    +L+  +K+FR + +   K  P  P+WF
Sbjct: 201 LEQLKTHSNDDLLEDQQREEDEREKYKTVTLNSFRKSFRDRLLQQQKETPHNPAWF 256


>AE014296-2821|AAN11713.1|  540|Drosophila melanogaster CG32170-PA
           protein.
          Length = 540

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 98  LPKTMTFKYPDLFEKSINEEEEHAK----SLDESKKNFR-KYIDHNKSRPDIPSWF 148
           L +  T    DL E    EE+E  K    +L+  +K+FR + +   K  P  P+WF
Sbjct: 201 LEQLKTHSNDDLLEDQQREEDEREKYKTVTLNSFRKSFRDRLLQQQKETPHNPAWF 256


>M20231-1|AAA28720.1| 1135|Drosophila melanogaster protein (
           D.melanogaster ninaCencoded short protein mRNA, complete
           cds. ).
          Length = 1135

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)

Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
           +EEH  S++E  +  R Y DH    P++P ++ +
Sbjct: 50  DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79


>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
           D.melanogaster ninaCencoded long protein mRNA, complete
           cds. ).
          Length = 1501

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)

Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
           +EEH  S++E  +  R Y DH    P++P ++ +
Sbjct: 50  DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79


>J03131-2|AAA28719.1| 1135|Drosophila melanogaster protein (
           D.melanogaster ninaCprotein genes, complete cds. ).
          Length = 1135

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)

Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
           +EEH  S++E  +  R Y DH    P++P ++ +
Sbjct: 50  DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79


>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
           D.melanogaster ninaCprotein genes, complete cds. ).
          Length = 1501

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)

Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
           +EEH  S++E  +  R Y DH    P++P ++ +
Sbjct: 50  DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79


>AY119496-1|AAM50150.1| 1135|Drosophila melanogaster GH10824p
           protein.
          Length = 1135

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)

Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
           +EEH  S++E  +  R Y DH    P++P ++ +
Sbjct: 50  DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79


>AE014134-1264|AAF52505.1| 1135|Drosophila melanogaster CG5125-PA,
           isoform A protein.
          Length = 1135

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)

Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
           +EEH  S++E  +  R Y DH    P++P ++ +
Sbjct: 50  DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79


>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
           isoform B protein.
          Length = 1501

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 4/34 (11%)

Query: 117 EEEHAKSLDESKKNFRKYIDHNKSRPDIPSWFSI 150
           +EEH  S++E  +  R Y DH    P++P ++ +
Sbjct: 50  DEEHQVSIEEEYRTLRDYCDH----PNLPEFYGV 79


>AE013599-3144|AAM70856.1|  980|Drosophila melanogaster CG30389-PC,
           isoform C protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 51  DIKNYLEKIYEVPVVD--VRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPD 108
           D+K Y  +I  +  ++  +R K++     K  ++    + DD++     L         +
Sbjct: 573 DVKKYRAEISHMKQIENELRQKLDANLTSKSTLQAKQKECDDLEKRIQELNNARHADMLN 632

Query: 109 L--FEKSINEEEEHAKSLD---ESKKNFRKYIDHNKSRPDIPS 146
           L   E+ +NEE    +SLD    ++K  RK  +   +RP+  S
Sbjct: 633 LQTVERRLNEERRQKQSLDSQLSNEKKARKLAEEKAARPECSS 675


>AE013599-3143|AAF46685.2|  980|Drosophila melanogaster CG30389-PA,
           isoform A protein.
          Length = 980

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 51  DIKNYLEKIYEVPVVD--VRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPD 108
           D+K Y  +I  +  ++  +R K++     K  ++    + DD++     L         +
Sbjct: 573 DVKKYRAEISHMKQIENELRQKLDANLTSKSTLQAKQKECDDLEKRIQELNNARHADMLN 632

Query: 109 L--FEKSINEEEEHAKSLD---ESKKNFRKYIDHNKSRPDIPS 146
           L   E+ +NEE    +SLD    ++K  RK  +   +RP+  S
Sbjct: 633 LQTVERRLNEERRQKQSLDSQLSNEKKARKLAEEKAARPECSS 675


>BT023949-1|ABB36453.1| 1312|Drosophila melanogaster IP03879p
           protein.
          Length = 1312

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 66  DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKS--INEEEEHAKS 123
           DV   +++ K +         KE +V  +  ++P      Y DL      I  E++H + 
Sbjct: 788 DVAADLSIKKVRLPAQAAASAKESEVGESTKSIPSPPLTPYGDLRPVGLCIKTEQDHEQE 847

Query: 124 LDESKKNFRKYIDHNKSRPD 143
           LD+ +   RK     +  PD
Sbjct: 848 LDQEQGQERKREQEQEPEPD 867


>AE014298-2334|AAF48566.2| 1311|Drosophila melanogaster CG32577-PA
           protein.
          Length = 1311

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 2/80 (2%)

Query: 66  DVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKS--INEEEEHAKS 123
           DV   +++ K +         KE +V  +  ++P      Y DL      I  E++H + 
Sbjct: 787 DVAADLSIKKVRLPAQAAASAKESEVGESTKSIPSPPLTPYGDLRPVGLCIKTEQDHEQE 846

Query: 124 LDESKKNFRKYIDHNKSRPD 143
           LD+ +   RK     +  PD
Sbjct: 847 LDQEQGQERKREQEQEPEPD 866


>BT001385-1|AAN71140.1|  374|Drosophila melanogaster GH03795p
           protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 64  VVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKT 101
           +VD ++K +  +  KD+ K  + K+D  K  FV+LPKT
Sbjct: 141 LVDFKSKEDRDQAFKDI-KASIEKDDKHKGLFVSLPKT 177


>AE014296-1720|AAF50217.1|  374|Drosophila melanogaster CG18178-PA
           protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)

Query: 64  VVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKT 101
           +VD ++K +  +  KD+ K  + K+D  K  FV+LPKT
Sbjct: 141 LVDFKSKEDRDQAFKDI-KASIEKDDKHKGLFVSLPKT 177


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,012,467
Number of Sequences: 52641
Number of extensions: 331800
Number of successful extensions: 1464
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1462
Number of HSP's gapped (non-prelim): 17
length of query: 150
length of database: 24,830,863
effective HSP length: 79
effective length of query: 71
effective length of database: 20,672,224
effective search space: 1467727904
effective search space used: 1467727904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)

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