Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001474-TA|BGIBMGA001474-PA|IPR013025|Ribosomal protein
L25/L23, IPR012678|Ribosomal L23 and L15e, core
(150 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 1.0
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 23 1.8
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 1.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 4.1
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 4.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 5.4
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 7.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 9.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 9.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 9.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 9.4
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 9.4
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 1.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
+KS E E+ K + SK+ FR + +S+
Sbjct: 280 QKSYKNEREYRKYRETSKERFRDRRERERSK 310
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 22.6 bits (46), Expect = 1.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
Q++++ N MK + H NIV +H S
Sbjct: 51 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 80
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.6 bits (46), Expect = 1.8
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 51 DIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPK 100
D+K LE + E ++D I GK +++ +K+ + V+ + K
Sbjct: 311 DLKGDLEGLVEGVIIDCSNHIGRGKLVTALIQRGTLKKGCLLVSGIASAK 360
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
+KS E ++ K + SK+ R + +SR P I S S
Sbjct: 47 QKSYKNERKYRKYRERSKERSRDRTERERSREPKIISSLS 86
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 4.1
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
+KS E ++ K + SK+ R + +SR P I S S
Sbjct: 47 QKSYKNERKYRKYRERSKERSRDRTERERSREPKIISSLS 86
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 5.4
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
+ S E+E+ K + SK+ R + +SR P I S S
Sbjct: 47 QNSYKNEKEYRKYRETSKERSRDRTERERSREPKIISSLS 86
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 7.1
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
+KS E + K + SK+ R + +SR P I S S
Sbjct: 47 QKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLS 86
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.6 bits (41), Expect = 7.1
Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
+KS E + K + SK+ R + +SR P I S S
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLS 319
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
+KS E + K + SK+ R + +SR
Sbjct: 269 QKSYKNENSYRKYRETSKERSRDRTERERSR 299
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
+KS E + K + SK+ R + +SR
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRTERERSR 310
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
+KS E + K + SK+ R + +SR
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRTERERSR 310
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
+KS E + K + SK+ R + +SR
Sbjct: 269 QKSYKNENSYRKYRETSKERSRDRTERERSR 299
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.2 bits (40), Expect = 9.4
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 92 KVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNF 131
K+ LPK + + PD + + H + K F
Sbjct: 338 KIFIRRLPKLLLMRVPDDLLNDLAAHKMHGRGRSGKKSKF 377
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.321 0.138 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,999
Number of Sequences: 429
Number of extensions: 2587
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 150
length of database: 140,377
effective HSP length: 53
effective length of query: 97
effective length of database: 117,640
effective search space: 11411080
effective search space used: 11411080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)
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