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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001474-TA|BGIBMGA001474-PA|IPR013025|Ribosomal protein
L25/L23, IPR012678|Ribosomal L23 and L15e, core
         (150 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   1.0  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    23   1.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.8  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   4.1  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   4.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.4  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   7.1  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.1  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    20   9.4  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    20   9.4  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    20   9.4  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    20   9.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    20   9.4  

>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
           +KS   E E+ K  + SK+ FR   +  +S+
Sbjct: 280 QKSYKNEREYRKYRETSKERFRDRRERERSK 310


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
          homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 15 QLRVFLPNFWMKLVRPHPKQLPNIVHFHCS 44
          Q++++  N  MK  + H     NIV +H S
Sbjct: 51 QIKIWFQNRRMKWKKEHKMASMNIVPYHMS 80


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 51  DIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPK 100
           D+K  LE + E  ++D    I  GK    +++   +K+  + V+ +   K
Sbjct: 311 DLKGDLEGLVEGVIIDCSNHIGRGKLVTALIQRGTLKKGCLLVSGIASAK 360


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
           +KS   E ++ K  + SK+  R   +  +SR P I S  S
Sbjct: 47  QKSYKNERKYRKYRERSKERSRDRTERERSREPKIISSLS 86


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
           +KS   E ++ K  + SK+  R   +  +SR P I S  S
Sbjct: 47  QKSYKNERKYRKYRERSKERSRDRTERERSREPKIISSLS 86


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
           + S   E+E+ K  + SK+  R   +  +SR P I S  S
Sbjct: 47  QNSYKNEKEYRKYRETSKERSRDRTERERSREPKIISSLS 86


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
           +KS   E  + K  + SK+  R   +  +SR P I S  S
Sbjct: 47  QKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLS 86


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR-PDIPSWFS 149
           +KS   E  + K  + SK+  R   +  +SR P I S  S
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRTERERSREPKIISSLS 319


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
           +KS   E  + K  + SK+  R   +  +SR
Sbjct: 269 QKSYKNENSYRKYRETSKERSRDRTERERSR 299


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
           +KS   E  + K  + SK+  R   +  +SR
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRTERERSR 310


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
           +KS   E  + K  + SK+  R   +  +SR
Sbjct: 280 QKSYKNENSYRKYRETSKERSRDRTERERSR 310


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 111 EKSINEEEEHAKSLDESKKNFRKYIDHNKSR 141
           +KS   E  + K  + SK+  R   +  +SR
Sbjct: 269 QKSYKNENSYRKYRETSKERSRDRTERERSR 299


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/40 (22%), Positives = 15/40 (37%)

Query: 92  KVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLDESKKNF 131
           K+    LPK +  + PD     +   + H +     K  F
Sbjct: 338 KIFIRRLPKLLLMRVPDDLLNDLAAHKMHGRGRSGKKSKF 377


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.138    0.426 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,999
Number of Sequences: 429
Number of extensions: 2587
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of query: 150
length of database: 140,377
effective HSP length: 53
effective length of query: 97
effective length of database: 117,640
effective search space: 11411080
effective search space used: 11411080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)

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