Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001473-TA|BGIBMGA001473-PA|IPR004841|Amino acid
permease-associated region
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 86 7e-17
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 86 7e-17
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 86 7e-17
At5g05630.1 68418.m00614 amino acid permease family protein weak... 30 5.0
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 86.2 bits (204), Expect = 7e-17
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 3 ASERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSL-----------NHL 51
A + GG YYL+ R+LG E G S+G+ F NAVA ++ +G ++ +
Sbjct: 193 AMKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGALYVLGAVETFLKAFPAAGIFRETI 252
Query: 52 LKTHGLKIVDN----DVNDIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXX 107
K +G + ++ + +D+++ G V +++C I G+ +
Sbjct: 253 TKVNGTAVSESIQSPNSHDLQVYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLLSIFCI 312
Query: 108 XXGALIGPSSDVERAKGFVGINLQTIRENWLPNFRYSE---------GREHDFFSVFAVY 158
G + + D + G G+ L++ ++NW ++ + G F + ++
Sbjct: 313 FIGIFLAKTDDPDN--GITGLRLKSFKDNWGSAYQMTNDAGIPDPTGGTYWSFNELVGLF 370
Query: 159 FPAVTGVQAGANICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGALRD 211
FPAVTG+ AG+N LK+ +IP GTL A + + Y V+ G A RD
Sbjct: 371 FPAVTGIMAGSNRSASLKDTQKSIPVGTLAATLTTTSLYLISVLFFGAVATRD 423
Score = 47.6 bits (108), Expect = 3e-05
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 321 WGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQ-------RPALIDVAHM 373
WG + +Q + + L H +++ P LV Q P L D A+
Sbjct: 596 WGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANC 655
Query: 374 LTKIGSFM-IVADITDTALTKGERVSRQHIGE--QFVKYRKLRAFYVLLQGLDLKRGANA 430
+ K G M I I D + +++ + +++Y++ ++ ++ G
Sbjct: 656 MKKKGRGMSIFVSILDGDYYECAEEAKEACKQLATYIEYKRCEGVAEIVVAPNMTEGFRG 715
Query: 431 LMQASGLGKLSPNILLIGFKKDWTNAEHKQI-SDYYGVIQDAFDLKLAVTILR 482
++Q GLG L PNI+++ + + W +I S + G+I D AV I++
Sbjct: 716 IIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPSTFVGIINDCITANKAVVIIK 768
Score = 45.6 bits (103), Expect = 1e-04
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 592 KQY--VDAWWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHKREFENKCMESLLK 649
+QY +D +W+ DGGL +LL ++ + +++F I +E E ++ L
Sbjct: 779 RQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQLFCIAEEDSDAEALKADVKKFLY 838
Query: 650 KFRI--EYTELTL----VRGIGDAPPES------SWKMFNNIINDFKSEEKTDILTSEAE 697
R+ E +T+ +R G++ +S + + ++ + + K + +L +
Sbjct: 839 DLRMHAEVIVVTMKSWDIRSEGNSQEDSLEAFDAAQRRISDYLGEIKRQGSNPLLANGKP 898
Query: 698 L---KSQYSK-TSXXXXXXXXXXQHSTKAAIVIITL-PLPRKVSASLYMAWLEVLSRDLP 752
+ + Q K +S AA+V+++L P P A YM ++++L ++P
Sbjct: 899 MVVNEQQVEKFLYTMLKLNSTILSYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLVENVP 958
Query: 753 PVLFVRG 759
+L VRG
Sbjct: 959 RMLIVRG 965
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 86.2 bits (204), Expect = 7e-17
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 3 ASERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSL-----------NHL 51
A + GG YYL+ R+LG E G S+G+ F NAVA ++ +G ++ +
Sbjct: 193 AMKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGALYVLGAVETFLKAFPAAGIFRETI 252
Query: 52 LKTHGLKIVDN----DVNDIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXX 107
K +G + ++ + +D+++ G V +++C I G+ +
Sbjct: 253 TKVNGTAVSESIQSPNSHDLQVYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLLSIFCI 312
Query: 108 XXGALIGPSSDVERAKGFVGINLQTIRENWLPNFRYSE---------GREHDFFSVFAVY 158
G + + D + G G+ L++ ++NW ++ + G F + ++
Sbjct: 313 FIGIFLAKTDDPDN--GITGLRLKSFKDNWGSAYQMTNDAGIPDPTGGTYWSFNELVGLF 370
Query: 159 FPAVTGVQAGANICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGALRD 211
FPAVTG+ AG+N LK+ +IP GTL A + + Y V+ G A RD
Sbjct: 371 FPAVTGIMAGSNRSASLKDTQKSIPVGTLAATLTTTSLYLISVLFFGAVATRD 423
Score = 47.6 bits (108), Expect = 3e-05
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 321 WGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQ-------RPALIDVAHM 373
WG + +Q + + L H +++ P LV Q P L D A+
Sbjct: 596 WGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANC 655
Query: 374 LTKIGSFM-IVADITDTALTKGERVSRQHIGE--QFVKYRKLRAFYVLLQGLDLKRGANA 430
+ K G M I I D + +++ + +++Y++ ++ ++ G
Sbjct: 656 MKKKGRGMSIFVSILDGDYYECAEEAKEACKQLATYIEYKRCEGVAEIVVAPNMTEGFRG 715
Query: 431 LMQASGLGKLSPNILLIGFKKDWTNAEHKQI-SDYYGVIQDAFDLKLAVTILR 482
++Q GLG L PNI+++ + + W +I S + G+I D AV I++
Sbjct: 716 IIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPSTFVGIINDCITANKAVVIIK 768
Score = 45.6 bits (103), Expect = 1e-04
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 592 KQY--VDAWWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHKREFENKCMESLLK 649
+QY +D +W+ DGGL +LL ++ + +++F I +E E ++ L
Sbjct: 779 RQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQLFCIAEEDSDAEALKADVKKFLY 838
Query: 650 KFRI--EYTELTL----VRGIGDAPPES------SWKMFNNIINDFKSEEKTDILTSEAE 697
R+ E +T+ +R G++ +S + + ++ + + K + +L +
Sbjct: 839 DLRMHAEVIVVTMKSWDIRSEGNSQEDSLEAFDAAQRRISDYLGEIKRQGSNPLLANGKP 898
Query: 698 L---KSQYSK-TSXXXXXXXXXXQHSTKAAIVIITL-PLPRKVSASLYMAWLEVLSRDLP 752
+ + Q K +S AA+V+++L P P A YM ++++L ++P
Sbjct: 899 MVVNEQQVEKFLYTMLKLNSTILSYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLVENVP 958
Query: 753 PVLFVRG 759
+L VRG
Sbjct: 959 RMLIVRG 965
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 86.2 bits (204), Expect = 7e-17
Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 3 ASERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSL-----------NHL 51
A + GG YYL+ R+LG E G S+G+ F NAVA ++ +G ++ +
Sbjct: 193 AMKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGALYVLGAVETFLKAFPAAGIFRETI 252
Query: 52 LKTHGLKIVDN----DVNDIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXX 107
K +G + ++ + +D+++ G V +++C I G+ +
Sbjct: 253 TKVNGTAVSESIQSPNSHDLQVYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLLSIFCI 312
Query: 108 XXGALIGPSSDVERAKGFVGINLQTIRENWLPNFRYSE---------GREHDFFSVFAVY 158
G + + D + G G+ L++ ++NW ++ + G F + ++
Sbjct: 313 FIGIFLAKTDDPDN--GITGLRLKSFKDNWGSAYQMTNDAGIPDPTGGTYWSFNELVGLF 370
Query: 159 FPAVTGVQAGANICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGALRD 211
FPAVTG+ AG+N LK+ +IP GTL A + + Y V+ G A RD
Sbjct: 371 FPAVTGIMAGSNRSASLKDTQKSIPVGTLAATLTTTSLYLISVLFFGAVATRD 423
Score = 47.6 bits (108), Expect = 3e-05
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 11/173 (6%)
Query: 321 WGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQ-------RPALIDVAHM 373
WG + +Q + + L H +++ P LV Q P L D A+
Sbjct: 596 WGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANC 655
Query: 374 LTKIGSFM-IVADITDTALTKGERVSRQHIGE--QFVKYRKLRAFYVLLQGLDLKRGANA 430
+ K G M I I D + +++ + +++Y++ ++ ++ G
Sbjct: 656 MKKKGRGMSIFVSILDGDYYECAEEAKEACKQLATYIEYKRCEGVAEIVVAPNMTEGFRG 715
Query: 431 LMQASGLGKLSPNILLIGFKKDWTNAEHKQI-SDYYGVIQDAFDLKLAVTILR 482
++Q GLG L PNI+++ + + W +I S + G+I D AV I++
Sbjct: 716 IIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPSTFVGIINDCITANKAVVIIK 768
Score = 45.6 bits (103), Expect = 1e-04
Identities = 41/187 (21%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 592 KQY--VDAWWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHKREFENKCMESLLK 649
+QY +D +W+ DGGL +LL ++ + +++F I +E E ++ L
Sbjct: 779 RQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQLFCIAEEDSDAEALKADVKKFLY 838
Query: 650 KFRI--EYTELTL----VRGIGDAPPES------SWKMFNNIINDFKSEEKTDILTSEAE 697
R+ E +T+ +R G++ +S + + ++ + + K + +L +
Sbjct: 839 DLRMHAEVIVVTMKSWDIRSEGNSQEDSLEAFDAAQRRISDYLGEIKRQGSNPLLANGKP 898
Query: 698 L---KSQYSK-TSXXXXXXXXXXQHSTKAAIVIITL-PLPRKVSASLYMAWLEVLSRDLP 752
+ + Q K +S AA+V+++L P P A YM ++++L ++P
Sbjct: 899 MVVNEQQVEKFLYTMLKLNSTILSYSRMAAVVLVSLPPPPLNHPAYFYMEYMDLLVENVP 958
Query: 753 PVLFVRG 759
+L VRG
Sbjct: 959 RMLIVRG 965
>At5g05630.1 68418.m00614 amino acid permease family protein weak
similarity to y+LAT1a (amino acid transporter) [Mus
musculus] GI:3970791; contains Pfam profile PF00324:
Amino acid permease
Length = 490
Score = 30.3 bits (65), Expect = 5.0
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 169 ANICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGAL 209
+ + G+++NP+ +P+ AL + V SY +L+G GA+
Sbjct: 252 STLTGEVENPSKTLPRALFYALLLVVFSYI-FPVLTGTGAI 291
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,618,268
Number of Sequences: 28952
Number of extensions: 575720
Number of successful extensions: 1276
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1261
Number of HSP's gapped (non-prelim): 10
length of query: 767
length of database: 12,070,560
effective HSP length: 87
effective length of query: 680
effective length of database: 9,551,736
effective search space: 6495180480
effective search space used: 6495180480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
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