GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001473-TA|BGIBMGA001473-PA|IPR004841|Amino acid
permease-associated region
         (767 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...   305   3e-84
AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        32   0.049
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    26   3.2  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score =  305 bits (749), Expect = 3e-84
 Identities = 137/301 (45%), Positives = 201/301 (66%), Gaps = 3/301 (0%)

Query: 7   GGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGLKIVDNDVND 66
           GG YY++SRSLG EFG S+G++F+ ANAVA +M  +GFC+S+  LL + G+ IVD  VND
Sbjct: 253 GGTYYMISRSLGPEFGGSIGLIFSLANAVACAMYVVGFCESMIDLLASFGVAIVDGAVND 312

Query: 67  IRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXXXXGALIGPSSDVERAKGFV 126
           +RI+G + ++++  I  +GM+WE KAQ  L             G+L GP S+++ A+GFV
Sbjct: 313 VRIIGCITIVLLLCIVVVGMEWEAKAQIVLLIILLVAIVDFCVGSLWGPKSELDVARGFV 372

Query: 127 GINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKGT 186
           G N   + EN    +R S+G +HDFFSVF+++FPA TG+ AGANI GDLK+P+ +IPKGT
Sbjct: 373 GYNATVLMENMQSAYRVSKGTQHDFFSVFSIFFPAATGILAGANISGDLKDPSSSIPKGT 432

Query: 187 LLALAISVTSYFTMVILSGMGALRDASGNVANLT--TAALESC-KPHCGYGLHNNYAIMQ 243
           +LA+AI+  SY  M +++G   LRDA+GNV ++   T    +C +  C YGLHN++ +M+
Sbjct: 433 ILAIAITSASYIGMAVVAGATVLRDATGNVTDVVNGTWDFSACEETSCAYGLHNSFQVME 492

Query: 244 LMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYRG 303
           L+S +GP IYAGC+              P++ QAL  D++YP + +F K +G++ EP RG
Sbjct: 493 LVSVFGPLIYAGCFAATLSSALASLVSAPKVFQALCKDKLYPKISWFGKGFGKNNEPVRG 552

Query: 304 Y 304
           Y
Sbjct: 553 Y 553



 Score =  268 bits (657), Expect = 4e-73
 Identities = 165/477 (34%), Positives = 253/477 (53%), Gaps = 35/477 (7%)

Query: 318  DVSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKI 377
            DV+WGS+T+ Q Y++ +  + +L++   H ++Y PQ+LVL G P  RP L++ A++LTK 
Sbjct: 653  DVNWGSTTQAQTYKNALLSVQQLNNVEEHVKNYRPQILVLCGHPSSRPLLVNFAYLLTKK 712

Query: 378  GSFMIVADITDTALTKGERVSRQHIGEQFVKYRKLRAFYVLLQGLDLKRGANALMQASGL 437
             S ++   +T T +++  R   Q    ++ +  K++ FY L+   D + G+ A+MQASG+
Sbjct: 713  LSLLVCGHVTKTHVSQKYRNHLQKKAAEWFRRHKVKGFYSLIDDNDFETGSRAIMQASGI 772

Query: 438  GKLSPNILLIGFKKDWTNAEHKQISDYYGVIQDAFDLKLAVTILRV-PGTSQTVQRWRWT 496
            GKL PN+LL+GFK DW   E  ++  Y+ V+  A D+ L+V ILRV  G   +      T
Sbjct: 773  GKLRPNVLLMGFKGDWDRCEPAELEQYFNVVHKALDMYLSVAILRVGKGFDYSQVLGEDT 832

Query: 497  PRVVSEPNNFELVMHTQVLALMNXXXXXXXXXXXXXXXXXXXXXXXNQLSNETSSSEQNP 556
             + +SE     LV +     L++                           ++T S   +P
Sbjct: 833  VKFISEYPR-TLVANDSTNDLLSHNKVSSLHGSCDSLSRNVSQASSTSDLSKTISVAPDP 891

Query: 557  ESIGGEALRSANFSRTSRRKLSNG--ALSFRA--------------LSFNCKQ---YVDA 597
              I  + +     + T +R L  G  +L +R                 F  K+    +D 
Sbjct: 892  IDINAKLI-----TETGQRSLKRGDPSLLYRGPGGAELPTEVLEELTQFTSKKKTGIIDV 946

Query: 598  WWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHKREFENKCMESLLKKFRIEYTE 657
            +WLY+DGGL +LLPYII+ R       LR+FA+   + + EFE + M SLL KFRI+Y++
Sbjct: 947  YWLYDDGGLTLLLPYIISTRRNWASCKLRVFALANRKTELEFEQRNMASLLAKFRIDYSD 1006

Query: 658  LTLVRGIGDAPPESSWKMFNNIINDFKS-EEKTDILT------SEAELKSQYSKTSXXXX 710
            L L+  +   P +     F  +I +F + ++  D  T      S+AEL +   KT+    
Sbjct: 1007 LQLLPDVTKKPNQEMADFFKGLIKEFTAKDDAADASTAGTSTISKAELLAVQDKTNRHLN 1066

Query: 711  XXXXXXQHSTKAAIVIITLPLPRK--VSASLYMAWLEVLSRDLPPVLFVRGNDSCVL 765
                  QHS+K+ +V++TLP+PRK  VSA LYMAWLE LSRDLPP LFVRGN + VL
Sbjct: 1067 LREYLLQHSSKSDLVVMTLPMPRKGVVSAPLYMAWLEALSRDLPPFLFVRGNQTSVL 1123


>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 32.3 bits (70), Expect = 0.049
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 653 IEYTELTLVRGIGDAPPESSWKMFNNIINDFKSEEKTDI 691
           + Y E  L R + D+ P++ WK+F  I   F +  KT I
Sbjct: 118 LNYLEQALGRQMSDSLPDAFWKLFQTIAGRFPATPKTPI 156


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/30 (33%), Positives = 21/30 (70%)

Query: 546 SNETSSSEQNPESIGGEALRSANFSRTSRR 575
           +++ ++S++NPES+  E +R+   S  SR+
Sbjct: 388 THQPTTSQENPESVTDEEIRNIGRSLKSRK 417


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,401
Number of Sequences: 2123
Number of extensions: 24530
Number of successful extensions: 52
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44
Number of HSP's gapped (non-prelim): 5
length of query: 767
length of database: 516,269
effective HSP length: 69
effective length of query: 698
effective length of database: 369,782
effective search space: 258107836
effective search space used: 258107836
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)