Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001473-TA|BGIBMGA001473-PA|IPR004841|Amino acid
permease-associated region
(767 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 217 2e-56
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 217 2e-56
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 217 2e-56
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 217 2e-56
M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical pr... 154 3e-37
U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical pr... 100 4e-21
U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily ass... 68 3e-11
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr... 64 3e-10
AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical ... 61 3e-09
AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical ... 61 3e-09
AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical ... 61 3e-09
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 59 1e-08
Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical pr... 29 9.3
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 217 bits (531), Expect = 2e-56
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 7 GGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGL-KIVDNDVN 65
GG Y+L+SRSLG EFG S+GI+F+ ANAV A+M +GF +S +L + + I D +
Sbjct: 309 GGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAESFRDVLIDYNIGTIFDGGLW 368
Query: 66 DIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXXXXGALIGPSSDVERAKGF 125
D+R++G V +++ I IG ++E+K Q L G+ P +++ +G
Sbjct: 369 DVRVIGFVTCVILMGIVFIGSEFESKMQLGLLVILLVSIANYVFGSFF-PPNEIAMNRGA 427
Query: 126 VGINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKG 185
G +L T++ N++P+F + FFSVF+VYFPA TG+ AGANI GDL NP AIP G
Sbjct: 428 TGYSLDTLQSNFMPHFT----ENNTFFSVFSVYFPAATGIMAGANISGDLANPQQAIPLG 483
Query: 186 TLLALAISVTSYFTMVILSGMGALRDASGN---VANLTTAALESCKPHCGYGLHNNYAIM 242
TLLA+ ++ Y V ++G + ++G V N + C P C +GL + Y ++
Sbjct: 484 TLLAILVTTIVYLLTVWMTGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFGLVSYYQVV 543
Query: 243 QLMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYR 302
++ S WGP I AG + P++ QA+ DR++P + +F+K YG++ EP R
Sbjct: 544 EMSSFWGPLITAGIFAATLSSALASLVSAPKVFQAVCKDRLFPRIDYFAKTYGKNEEPKR 603
Query: 303 GY 304
Y
Sbjct: 604 AY 605
Score = 144 bits (349), Expect = 2e-34
Identities = 71/179 (39%), Positives = 114/179 (63%), Gaps = 5/179 (2%)
Query: 592 KQYVDAWWLYEDGGLNILLPYIIA-RRGYKHKLPLRIFAITKEQHKREFENKCMESLLKK 650
K +D WWLY+DGGL +L+P+++A + Y LRIF I+ E E + M +LL K
Sbjct: 1028 KGTIDVWWLYDDGGLTLLIPHLLAIPKSYLEGARLRIFTISTSSRTMEQEQRGMAALLSK 1087
Query: 651 FRIEYTELTLVRGIGDAPPESSWKMFNNIINDFKSEEKTDIL--TSEAELKSQYSKTSXX 708
FRI+Y+++ ++ IG P + + + ++I+ F +++ + + T+++EL +Q KT
Sbjct: 1088 FRIDYSDVYVIADIGKKPRQETMNTWQSVIDPFIAQDGSCPIGMTTKSELSAQRDKTYRQ 1147
Query: 709 XXXXXXXXQHSTKAAIVIITLPLPRK--VSASLYMAWLEVLSRDLPPVLFVRGNDSCVL 765
+HS A ++++TLP+PRK VS+SLYM+WLEV++R+LPPVL VRGN VL
Sbjct: 1148 LRAGELLNEHSINADLIVMTLPVPRKGMVSSSLYMSWLEVMTRNLPPVLLVRGNQQSVL 1206
Score = 120 bits (290), Expect = 3e-27
Identities = 58/173 (33%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Query: 318 DVSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKI 377
DV+WGSST+ Y++ +S + +LS H ++Y PQ+LVL+G P R L+D A+ +TK
Sbjct: 705 DVNWGSSTQAHSYKNALSAMIKLSTTEEHVKNYRPQVLVLSGNPASRSCLVDFANNITKG 764
Query: 378 GSFMIVADITDTALTKGERVSRQHIGEQ---FVKYRKLRAFYVLLQGLDLKRGANALMQA 434
S ++ + + + + + E +++ R L+AFY + + ++GA +L+Q
Sbjct: 765 SSLLVCGQVVPYEPSDRVYMVMKRLDENINVWLRKRHLKAFYRAVANSNFRKGAQSLIQL 824
Query: 435 SGLGKLSPNILLIGFKKDW-----TNAEHKQISDYYGVIQDAFDLKLAVTILR 482
+G+ K+ PNI+L+GFK +W T ++++Y+G IQD FD +A+ +LR
Sbjct: 825 TGIAKMKPNIVLMGFKSNWYKGGPTETNLNEMNEYFGTIQDVFDWNMAMCVLR 877
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 217 bits (531), Expect = 2e-56
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 7 GGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGL-KIVDNDVN 65
GG Y+L+SRSLG EFG S+GI+F+ ANAV A+M +GF +S +L + + I D +
Sbjct: 309 GGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAESFRDVLIDYNIGTIFDGGLW 368
Query: 66 DIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXXXXGALIGPSSDVERAKGF 125
D+R++G V +++ I IG ++E+K Q L G+ P +++ +G
Sbjct: 369 DVRVIGFVTCVILMGIVFIGSEFESKMQLGLLVILLVSIANYVFGSFF-PPNEIAMNRGA 427
Query: 126 VGINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKG 185
G +L T++ N++P+F + FFSVF+VYFPA TG+ AGANI GDL NP AIP G
Sbjct: 428 TGYSLDTLQSNFMPHFT----ENNTFFSVFSVYFPAATGIMAGANISGDLANPQQAIPLG 483
Query: 186 TLLALAISVTSYFTMVILSGMGALRDASGN---VANLTTAALESCKPHCGYGLHNNYAIM 242
TLLA+ ++ Y V ++G + ++G V N + C P C +GL + Y ++
Sbjct: 484 TLLAILVTTIVYLLTVWMTGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFGLVSYYQVV 543
Query: 243 QLMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYR 302
++ S WGP I AG + P++ QA+ DR++P + +F+K YG++ EP R
Sbjct: 544 EMSSFWGPLITAGIFAATLSSALASLVSAPKVFQAVCKDRLFPRIDYFAKTYGKNEEPKR 603
Query: 303 GY 304
Y
Sbjct: 604 AY 605
Score = 120 bits (290), Expect = 3e-27
Identities = 58/173 (33%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Query: 318 DVSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKI 377
DV+WGSST+ Y++ +S + +LS H ++Y PQ+LVL+G P R L+D A+ +TK
Sbjct: 705 DVNWGSSTQAHSYKNALSAMIKLSTTEEHVKNYRPQVLVLSGNPASRSCLVDFANNITKG 764
Query: 378 GSFMIVADITDTALTKGERVSRQHIGEQ---FVKYRKLRAFYVLLQGLDLKRGANALMQA 434
S ++ + + + + + E +++ R L+AFY + + ++GA +L+Q
Sbjct: 765 SSLLVCGQVVPYEPSDRVYMVMKRLDENINVWLRKRHLKAFYRAVANSNFRKGAQSLIQL 824
Query: 435 SGLGKLSPNILLIGFKKDW-----TNAEHKQISDYYGVIQDAFDLKLAVTILR 482
+G+ K+ PNI+L+GFK +W T ++++Y+G IQD FD +A+ +LR
Sbjct: 825 TGIAKMKPNIVLMGFKSNWYKGGPTETNLNEMNEYFGTIQDVFDWNMAMCVLR 877
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 217 bits (531), Expect = 2e-56
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 7 GGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGL-KIVDNDVN 65
GG Y+L+SRSLG EFG S+GI+F+ ANAV A+M +GF +S +L + + I D +
Sbjct: 309 GGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAESFRDVLIDYNIGTIFDGGLW 368
Query: 66 DIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXXXXGALIGPSSDVERAKGF 125
D+R++G V +++ I IG ++E+K Q L G+ P +++ +G
Sbjct: 369 DVRVIGFVTCVILMGIVFIGSEFESKMQLGLLVILLVSIANYVFGSFF-PPNEIAMNRGA 427
Query: 126 VGINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKG 185
G +L T++ N++P+F + FFSVF+VYFPA TG+ AGANI GDL NP AIP G
Sbjct: 428 TGYSLDTLQSNFMPHFT----ENNTFFSVFSVYFPAATGIMAGANISGDLANPQQAIPLG 483
Query: 186 TLLALAISVTSYFTMVILSGMGALRDASGN---VANLTTAALESCKPHCGYGLHNNYAIM 242
TLLA+ ++ Y V ++G + ++G V N + C P C +GL + Y ++
Sbjct: 484 TLLAILVTTIVYLLTVWMTGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFGLVSYYQVV 543
Query: 243 QLMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYR 302
++ S WGP I AG + P++ QA+ DR++P + +F+K YG++ EP R
Sbjct: 544 EMSSFWGPLITAGIFAATLSSALASLVSAPKVFQAVCKDRLFPRIDYFAKTYGKNEEPKR 603
Query: 303 GY 304
Y
Sbjct: 604 AY 605
Score = 144 bits (349), Expect = 2e-34
Identities = 71/179 (39%), Positives = 114/179 (63%), Gaps = 5/179 (2%)
Query: 592 KQYVDAWWLYEDGGLNILLPYIIA-RRGYKHKLPLRIFAITKEQHKREFENKCMESLLKK 650
K +D WWLY+DGGL +L+P+++A + Y LRIF I+ E E + M +LL K
Sbjct: 1028 KGTIDVWWLYDDGGLTLLIPHLLAIPKSYLEGARLRIFTISTSSRTMEQEQRGMAALLSK 1087
Query: 651 FRIEYTELTLVRGIGDAPPESSWKMFNNIINDFKSEEKTDIL--TSEAELKSQYSKTSXX 708
FRI+Y+++ ++ IG P + + + ++I+ F +++ + + T+++EL +Q KT
Sbjct: 1088 FRIDYSDVYVIADIGKKPRQETMNTWQSVIDPFIAQDGSCPIGMTTKSELSAQRDKTYRQ 1147
Query: 709 XXXXXXXXQHSTKAAIVIITLPLPRK--VSASLYMAWLEVLSRDLPPVLFVRGNDSCVL 765
+HS A ++++TLP+PRK VS+SLYM+WLEV++R+LPPVL VRGN VL
Sbjct: 1148 LRAGELLNEHSINADLIVMTLPVPRKGMVSSSLYMSWLEVMTRNLPPVLLVRGNQQSVL 1206
Score = 120 bits (290), Expect = 3e-27
Identities = 58/173 (33%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Query: 318 DVSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKI 377
DV+WGSST+ Y++ +S + +LS H ++Y PQ+LVL+G P R L+D A+ +TK
Sbjct: 705 DVNWGSSTQAHSYKNALSAMIKLSTTEEHVKNYRPQVLVLSGNPASRSCLVDFANNITKG 764
Query: 378 GSFMIVADITDTALTKGERVSRQHIGEQ---FVKYRKLRAFYVLLQGLDLKRGANALMQA 434
S ++ + + + + + E +++ R L+AFY + + ++GA +L+Q
Sbjct: 765 SSLLVCGQVVPYEPSDRVYMVMKRLDENINVWLRKRHLKAFYRAVANSNFRKGAQSLIQL 824
Query: 435 SGLGKLSPNILLIGFKKDW-----TNAEHKQISDYYGVIQDAFDLKLAVTILR 482
+G+ K+ PNI+L+GFK +W T ++++Y+G IQD FD +A+ +LR
Sbjct: 825 TGIAKMKPNIVLMGFKSNWYKGGPTETNLNEMNEYFGTIQDVFDWNMAMCVLR 877
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 217 bits (531), Expect = 2e-56
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 7 GGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGL-KIVDNDVN 65
GG Y+L+SRSLG EFG S+GI+F+ ANAV A+M +GF +S +L + + I D +
Sbjct: 309 GGAYFLISRSLGPEFGGSIGIIFSIANAVGAAMYIVGFAESFRDVLIDYNIGTIFDGGLW 368
Query: 66 DIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXXXXGALIGPSSDVERAKGF 125
D+R++G V +++ I IG ++E+K Q L G+ P +++ +G
Sbjct: 369 DVRVIGFVTCVILMGIVFIGSEFESKMQLGLLVILLVSIANYVFGSFF-PPNEIAMNRGA 427
Query: 126 VGINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKG 185
G +L T++ N++P+F + FFSVF+VYFPA TG+ AGANI GDL NP AIP G
Sbjct: 428 TGYSLDTLQSNFMPHFT----ENNTFFSVFSVYFPAATGIMAGANISGDLANPQQAIPLG 483
Query: 186 TLLALAISVTSYFTMVILSGMGALRDASGN---VANLTTAALESCKPHCGYGLHNNYAIM 242
TLLA+ ++ Y V ++G + ++G V N + C P C +GL + Y ++
Sbjct: 484 TLLAILVTTIVYLLTVWMTGSTVVAFSNGTEPAVFNNSYFVPPDCTPDCPFGLVSYYQVV 543
Query: 243 QLMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYR 302
++ S WGP I AG + P++ QA+ DR++P + +F+K YG++ EP R
Sbjct: 544 EMSSFWGPLITAGIFAATLSSALASLVSAPKVFQAVCKDRLFPRIDYFAKTYGKNEEPKR 603
Query: 303 GY 304
Y
Sbjct: 604 AY 605
Score = 120 bits (290), Expect = 3e-27
Identities = 58/173 (33%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Query: 318 DVSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKI 377
DV+WGSST+ Y++ +S + +LS H ++Y PQ+LVL+G P R L+D A+ +TK
Sbjct: 705 DVNWGSSTQAHSYKNALSAMIKLSTTEEHVKNYRPQVLVLSGNPASRSCLVDFANNITKG 764
Query: 378 GSFMIVADITDTALTKGERVSRQHIGEQ---FVKYRKLRAFYVLLQGLDLKRGANALMQA 434
S ++ + + + + + E +++ R L+AFY + + ++GA +L+Q
Sbjct: 765 SSLLVCGQVVPYEPSDRVYMVMKRLDENINVWLRKRHLKAFYRAVANSNFRKGAQSLIQL 824
Query: 435 SGLGKLSPNILLIGFKKDW-----TNAEHKQISDYYGVIQDAFDLKLAVTILR 482
+G+ K+ PNI+L+GFK +W T ++++Y+G IQD FD +A+ +LR
Sbjct: 825 TGIAKMKPNIVLMGFKSNWYKGGPTETNLNEMNEYFGTIQDVFDWNMAMCVLR 877
>M77697-7|AAA27902.6| 903|Caenorhabditis elegans Hypothetical
protein B0303.11 protein.
Length = 903
Score = 154 bits (373), Expect = 3e-37
Identities = 114/452 (25%), Positives = 201/452 (44%), Gaps = 21/452 (4%)
Query: 322 GSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKIGSFM 381
G Y + + EL R ++PQ+L+L+G+P RP L+D AH +T+ S +
Sbjct: 448 GEECPKSMYSSVLEQMHELQQEPDSRRHFHPQILLLSGSPAARPGLVDFAHSITRGKSLL 507
Query: 382 IVADITDTALTKGERVSRQHIGEQ---FVKYRKLRAFYVLLQGLDLKRGANALMQASGLG 438
I I + + + I +Q +++ R++ AF + GAN L+Q LG
Sbjct: 508 ICGYIIPQSPCSRSYLLQLKIDKQINDWLRAREVNAFGAAICCTKQAEGANILLQ---LG 564
Query: 439 KLSPNILLIGFKKDWTNAEHKQISDYYGVIQDAFDLKLAVTILRVPGTSQTVQRWRWTPR 498
+L PNIL++G+K W + IS+YYG++ +AFD ++ V I R + V + R
Sbjct: 565 RLRPNILMLGYKTGWEKLSKESISEYYGMLSNAFDKQVGVIIFRNEASGFDVTS---SIR 621
Query: 499 VVSEP-NNFELVMHTQVLALMNXXXXXXXXXXXXXXXXXXXXXXXNQLSNETSSSEQNPE 557
P N+ E + A + E+
Sbjct: 622 KNGAPINDDEDLAEYVDSATPKLADQGSQKKDVPRGKLLNTFRKMSMADLESGGRRSTSS 681
Query: 558 SIGGEALRSANFSRTSRRKLSNGALSFRALSFNCKQYVDAWWLYEDGGLNILLPYIIARR 617
S + + + S ++ + FR N + +D +WL E GGL +L PY++ +
Sbjct: 682 STRFQVIDKHSISEPDQKIIMAQMFRFRKRIPNAR--IDVFWLREAGGLTMLAPYLLTQA 739
Query: 618 G-YKHKLPLRIFAIT--KEQHKREFENKCMESLLKKFRIEYTELTLVRGIGDAPPESSWK 674
G + +R+F T K+ + E K M ++L+KF I+ ++L ++ P + ++
Sbjct: 740 GSFLEGAHIRVFTKTDGKDNKRINEEQKNMAAILRKFHIDSSDLHILPEFSKPPCKQTYD 799
Query: 675 MFNNIINDFKSE-----EKTDILTSEAELKSQYSKTSXXXXXXXXXXQHSTKAAIVIITL 729
F I+ +K E E D ++ + KT +HS+ A +++ TL
Sbjct: 800 EFRAKIDKYKVETSSSGEPVDGSFDNNQIFNLREKTRSFLRASELIREHSSDADLIVCTL 859
Query: 730 PLPR-KVSASLYMAWLEVLSRDLPPVLFVRGN 760
P R ++ + +Y+ W+++LSR PP VRGN
Sbjct: 860 PSARPEIPSPIYLGWIDMLSRQTPPTCLVRGN 891
Score = 47.6 bits (108), Expect = 3e-05
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 3 ASERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGLKIVDN 62
+SE G V +++ S EF S I++ F VA S +++ H+ T L+++D
Sbjct: 79 SSEVGFVKTMLAYS-STEFAISFSIIYLFCLLVATSTFLTSAAEAVLHIFSTFSLELLDG 137
Query: 63 DVNDIRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXXXXGALIGPSSDVERA 122
+D+R+V +V L+ +C + + F+ A+ S V
Sbjct: 138 ATHDLRLVSSVLSLITLALCMVRNRNARFVRTFIFALTCI--------AIALQLSSVMFR 189
Query: 123 KGFVGINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAI 182
G + + R +P+ + ++FA FPA NI L+N A
Sbjct: 190 YGEYQLRRVSDRNAMIPS-----PPNEEISTIFAQLFPAAMCGLTILNIGSKLQNTA--- 241
Query: 183 PKGTLLALAISVTSYFTMVIL 203
P+G L+A+A+S Y +L
Sbjct: 242 PRGALIAIAVSACFYGAAAML 262
>U41264-3|AAA82423.1| 574|Caenorhabditis elegans Hypothetical
protein F10E7.9 protein.
Length = 574
Score = 100 bits (239), Expect = 4e-21
Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 13/207 (6%)
Query: 7 GGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGLKIVDNDVND 66
GG+Y+LVS LG + G ++GI++AF AVA + +GF +S+ HL ++ KI+
Sbjct: 112 GGIYFLVSHVLGHQIGGAIGIIYAFGQAVATGLVAVGFGESVAHLFESES-KIM------ 164
Query: 67 IRIVGAVALLVMCVICAIGMDWETKAQNFLXXXXXXXXXXXXXGALIG--PSSDVER-AK 123
I+ + + L+V+ + G+ W + Q L GAL P S V R +
Sbjct: 165 IKGIAILTLMVLTAVNTAGVTWVVRLQIVLLLTIALAVTDFIFGALFSSEPESGVFRFSS 224
Query: 124 GFVGINLQTIRE--NWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVA 181
+ +N + E N + E FF+VF V+F GV AG N+ GDLK+P +
Sbjct: 225 ERIRVNADSHYEAVNCSIIGIPRQIPEQSFFTVFGVFFANFLGVLAGVNMSGDLKDPHKS 284
Query: 182 IPKGTLLALAISVTSYFTMV-ILSGMG 207
IP G L A+ +S T F + IL G+G
Sbjct: 285 IPLGELSAVGVSSTICFIFIMILGGVG 311
>U40798-6|AAA81476.1| 1003|Caenorhabditis elegans Temporarily
assigned gene nameprotein 158 protein.
Length = 1003
Score = 67.7 bits (158), Expect = 3e-11
Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 151 FFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGALR 210
FF + A+YFPAVTG+ GAN+ GDLKNP +IP GT+ A + YF++ + G GA
Sbjct: 329 FFVLLAIYFPAVTGIFTGANMSGDLKNPQASIPAGTIAANLTTSFVYFSLAFIFG-GA-- 385
Query: 211 DASGNVANLTTAALESCKPHCGYGLHNNYAIMQLMSAWGPFIYAGCWXXXXXXXXXXXXX 270
+ A L K G A++ S W + G +
Sbjct: 386 --------IDNAVLRD-KNGQSVGGQMVVALLSWPSPW--VLLIGSFLSTFGAALQCLCS 434
Query: 271 VPRLIQALGVDRIYPGLIFFSKPYGRHGEPYRG 303
PRL+QA+ D + P L F K + EP+ G
Sbjct: 435 APRLLQAIAKDEVIPLLSPFKK-VTANNEPFLG 466
Score = 54.8 bits (126), Expect = 2e-07
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 5 ERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSL----------NHLLKT 54
E GG Y+++SR+LG EFG++VGILF AN VA SM +G + L +
Sbjct: 97 ESGGAYFMISRNLGPEFGSAVGILFYLANTVATSMYLVGGVEILLLYIFPGLTFGGVEGQ 156
Query: 55 HGLKIVDNDVNDIRIVGAVALLVMCVICAIGM 86
H + N +R + LL+ I A+G+
Sbjct: 157 HDTSMFGTMTNSLRFYSTILLLIEFAIVAMGV 188
Score = 39.5 bits (88), Expect = 0.009
Identities = 17/78 (21%), Positives = 37/78 (47%)
Query: 577 LSNGALSFRALSFNCKQYVDAWWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHK 636
++ G + F + F +D +W+ DGGL +L+ Y++ + LR+ I +E
Sbjct: 742 VAKGIIDFPSAVFRMSGMIDVYWIVHDGGLCLLMGYLLKQHKVWRGCKLRVIGIAQESDN 801
Query: 637 REFENKCMESLLKKFRIE 654
+ ++ + + RI+
Sbjct: 802 NVKMQEDLQKYVYQLRID 819
Score = 37.1 bits (82), Expect = 0.047
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 321 WGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHM-LTKIGS 379
WG G + ++ + H +++ PQLL+L + +IDV ++ L + S
Sbjct: 570 WGDGIRGLALTTAQYSLMKIEDKEPHPKNWRPQLLLLLSMQWSKE-IIDVRYLNLLNLAS 628
Query: 380 FMIVAD--ITDTALTKGERVSR--QHIGEQFVKYR--------KLRAFY-VLLQGLDLKR 426
+ TA +G+ S + GEQ VK R +LR F L+ D R
Sbjct: 629 QLKAGKGLTVVTAFLQGDPTSPDDKKKGEQ-VKARMDFDMNQVRLRGFAKTLVHSEDQVR 687
Query: 427 GA-NALMQASGLGKLSPNILLIGF 449
G+ + L+Q+ GLG L PN +LI +
Sbjct: 688 GSMSTLVQSVGLGGLKPNTMLISW 711
Score = 35.9 bits (79), Expect = 0.11
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 686 EEKTDILTSEAELKSQYSKTSXXXXXXXXXXQHSTKAAIVIITLPLP--RKVSASL--YM 741
E KT +A +S+ SK QHS + ++++ LP P K +L Y+
Sbjct: 916 ETKTKKERMKALDRSKVSKMHTAVRLNELLLQHSANSQLILLNLPKPPVHKDQQALDDYV 975
Query: 742 AWLEVLSRDLPPVLFVRGNDSCVL 765
+LEV++ L V+FVRG V+
Sbjct: 976 HYLEVMTDKLNRVIFVRGTGKEVI 999
>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
protein K02A2.3 protein.
Length = 1020
Score = 64.5 bits (150), Expect = 3e-10
Identities = 36/92 (39%), Positives = 55/92 (59%), Gaps = 10/92 (10%)
Query: 5 ERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLL----------KT 54
E GG Y+++SR+LGAEFG++VGILF AN VAASM +G + + L
Sbjct: 133 ESGGAYFIISRNLGAEFGSAVGILFYLANTVAASMYIVGGVEVILMYLWPEMAIGGADAL 192
Query: 55 HGLKIVDNDVNDIRIVGAVALLVMCVICAIGM 86
H ++ + N++R+ G V LL+ +I A+G+
Sbjct: 193 HDTEMFGSLYNNLRLYGTVFLLIQALIVAMGV 224
Score = 64.1 bits (149), Expect = 4e-10
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 151 FFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGALR 210
FF + A+YFPAVTG+ G N+ GDL++P +IP GT+ A + Y+ + IL G
Sbjct: 379 FFMLMAIYFPAVTGIFTGTNMSGDLRDPQRSIPVGTIAATLTTSAIYYILAILFG----- 433
Query: 211 DASGNVANLTTAALESCKPHCGYGLHNNYAIMQLMSAWGPFIYAGCWXXXXXXXXXXXXX 270
++T + L + G + N + L + G +
Sbjct: 434 ------GSITRSVL---RDKFGRSIGNTMVVAALSWPHPAVVTVGAFLSTFGAALQCLCS 484
Query: 271 VPRLIQALGVDRIYPGLIFFSKPYGRHGEPYRG 303
PRL+Q++ D + P L F++ ++ EP+ G
Sbjct: 485 APRLLQSIAKDDVIPILAPFAR-VTKNNEPFLG 516
Score = 44.4 bits (100), Expect = 3e-04
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 577 LSNGALSFRALSFNCKQYVDAWWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHK 636
++ G F S ++D WW+ +DGG+ +L+ Y++ + LRIFA++++
Sbjct: 760 VTKGITDFPEYSERLTGFIDIWWIVQDGGILMLIAYLLRQHKVWKGCTLRIFAVSEQDST 819
Query: 637 REFENKC-MESLLKKFRIEYTELTLV 661
+ + K ++ + RI+ EL +V
Sbjct: 820 KSEDMKAGLQKYIYMLRID-AELFIV 844
Score = 37.5 bits (83), Expect = 0.035
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 695 EAELKSQYSKTSXXXXXXXXXXQHSTKAAIVIITLPLP---RKVSASLYMAWLEVLSRDL 751
E +K K + ++S + ++++ LP P R + YM +L+VL+ DL
Sbjct: 943 EGAMKLNIHKMNTSVRLNRVIRENSPDSQLILLNLPSPPRNRLAFNNSYMTYLDVLTEDL 1002
Query: 752 PPVLFVRGN 760
P VLF+ G+
Sbjct: 1003 PRVLFIGGS 1011
>AF040650-3|ABE73333.1| 836|Caenorhabditis elegans Hypothetical
protein T04B8.5c protein.
Length = 836
Score = 60.9 bits (141), Expect = 3e-09
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 125 FVGINLQTIRENWLPNFR--YSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAI 182
+ G + T+ EN P + Y+ + DF +FA+ F VTG+ AGAN+ G+L P+V+I
Sbjct: 176 YTGWSFHTLGENMFPEYTMDYTTEKPTDFALMFAIIFSGVTGLMAGANMSGELARPSVSI 235
Query: 183 PKGTLLALAISVTSYFTMVIL 203
P+GT+ A+ +++ Y L
Sbjct: 236 PRGTVQAVFMTLFVYVMTAFL 256
Score = 60.5 bits (140), Expect = 4e-09
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 319 VSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKIG 378
VS GS ++ Y ++ L R H + + PQ+L+L P +L+D + L K G
Sbjct: 436 VSSGSISQALIYHQVRKYLLLLDVRKEHVKYWRPQILLLVSRPASACSLLDFVNDLKKSG 495
Query: 379 SFMIVADITDTALTKGERVSR-QHIGEQF---VKYRKLRAFYVLLQGLDLKRGANALMQA 434
++ V + + + V Q + + + Y KL+AF L +++ G LM+
Sbjct: 496 LYL-VGHVRKGEMDSSQVVDPLQQVFPYWLSLIDYLKLKAFVELTMSNNIRHGIQQLMRL 554
Query: 435 SGLGKLSPNILLIGF 449
SGLG + PN ++IGF
Sbjct: 555 SGLGAMKPNTVVIGF 569
Score = 54.4 bits (125), Expect = 3e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 3 ASERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSL 48
A E GGVYY++SRSLG EFG ++G+LF AN + ++ GF ++L
Sbjct: 28 AVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEAL 73
>AF040650-2|AAT81190.1| 939|Caenorhabditis elegans Hypothetical
protein T04B8.5b protein.
Length = 939
Score = 60.9 bits (141), Expect = 3e-09
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 125 FVGINLQTIRENWLPNFR--YSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAI 182
+ G + T+ EN P + Y+ + DF +FA+ F VTG+ AGAN+ G+L P+V+I
Sbjct: 279 YTGWSFHTLGENMFPEYTMDYTTEKPTDFALMFAIIFSGVTGLMAGANMSGELARPSVSI 338
Query: 183 PKGTLLALAISVTSYFTMVIL 203
P+GT+ A+ +++ Y L
Sbjct: 339 PRGTVQAVFMTLFVYVMTAFL 359
Score = 60.5 bits (140), Expect = 4e-09
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 319 VSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKIG 378
VS GS ++ Y ++ L R H + + PQ+L+L P +L+D + L K G
Sbjct: 539 VSSGSISQALIYHQVRKYLLLLDVRKEHVKYWRPQILLLVSRPASACSLLDFVNDLKKSG 598
Query: 379 SFMIVADITDTALTKGERVSR-QHIGEQF---VKYRKLRAFYVLLQGLDLKRGANALMQA 434
++ V + + + V Q + + + Y KL+AF L +++ G LM+
Sbjct: 599 LYL-VGHVRKGEMDSSQVVDPLQQVFPYWLSLIDYLKLKAFVELTMSNNIRHGIQQLMRL 657
Query: 435 SGLGKLSPNILLIGF 449
SGLG + PN ++IGF
Sbjct: 658 SGLGAMKPNTVVIGF 672
Score = 54.4 bits (125), Expect = 3e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 3 ASERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSL 48
A E GGVYY++SRSLG EFG ++G+LF AN + ++ GF ++L
Sbjct: 131 AVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEAL 176
>AF040650-1|AAB95011.1| 952|Caenorhabditis elegans Hypothetical
protein T04B8.5a protein.
Length = 952
Score = 60.9 bits (141), Expect = 3e-09
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 125 FVGINLQTIRENWLPNFR--YSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAI 182
+ G + T+ EN P + Y+ + DF +FA+ F VTG+ AGAN+ G+L P+V+I
Sbjct: 292 YTGWSFHTLGENMFPEYTMDYTTEKPTDFALMFAIIFSGVTGLMAGANMSGELARPSVSI 351
Query: 183 PKGTLLALAISVTSYFTMVIL 203
P+GT+ A+ +++ Y L
Sbjct: 352 PRGTVQAVFMTLFVYVMTAFL 372
Score = 60.5 bits (140), Expect = 4e-09
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 319 VSWGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGTPLQRPALIDVAHMLTKIG 378
VS GS ++ Y ++ L R H + + PQ+L+L P +L+D + L K G
Sbjct: 552 VSSGSISQALIYHQVRKYLLLLDVRKEHVKYWRPQILLLVSRPASACSLLDFVNDLKKSG 611
Query: 379 SFMIVADITDTALTKGERVSR-QHIGEQF---VKYRKLRAFYVLLQGLDLKRGANALMQA 434
++ V + + + V Q + + + Y KL+AF L +++ G LM+
Sbjct: 612 LYL-VGHVRKGEMDSSQVVDPLQQVFPYWLSLIDYLKLKAFVELTMSNNIRHGIQQLMRL 670
Query: 435 SGLGKLSPNILLIGF 449
SGLG + PN ++IGF
Sbjct: 671 SGLGAMKPNTVVIGF 685
Score = 54.4 bits (125), Expect = 3e-07
Identities = 23/46 (50%), Positives = 33/46 (71%)
Query: 3 ASERGGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSL 48
A E GGVYY++SRSLG EFG ++G+LF AN + ++ GF ++L
Sbjct: 144 AVEGGGVYYMISRSLGPEFGGAIGVLFFVANVFSCALYISGFTEAL 189
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 58.8 bits (136), Expect = 1e-08
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 139 PNFRYSEGREHDFFSVFAVYFPAVTGVQAGANICGDLKNPAVAIPKGTLLALAISVTSYF 198
P++ Y+E + F + V+FP+ TG+ AG+N G+L++ A +IP GTL A S Y
Sbjct: 286 PSYIYAESVTN-FMILVGVFFPSATGIMAGSNRSGNLRDAAKSIPLGTLAAQNFSSFIYL 344
Query: 199 TMVILSGMGALRDASGNVANLTTAALESCKPHCGYGLHNNYAIMQLMSAWGPFIYAGCWX 258
V+L G +V+ + + G I ++ + I GC+
Sbjct: 345 LGVVLFG--------ASVSEM------FIRDKYGRSAMGKLIISEISWPFPQVILFGCFM 390
Query: 259 XXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEPYR 302
PRL+QA+ D + P L F K R GEP R
Sbjct: 391 STAGAGMQSLTGAPRLLQAIAADDVLPFLKPFRKMDSR-GEPIR 433
Score = 58.0 bits (134), Expect = 2e-08
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 7 GGVYYLVSRSLGAEFGASVGILFAFANAVAASMNTIGFCDSLNHLLKTHGLKIVDNDVND 66
GG YY++SR+LG E G +VGILF +AASM G + L + K+ D+ ++
Sbjct: 66 GGPYYMISRNLGPELGGAVGILFYLGTTIAASMYITGAIEILLLYIYPQA-KLFDDIYHN 124
Query: 67 IRIVGAVALLVMCVICAIGM 86
R++G V LL++ +I G+
Sbjct: 125 FRVLGTVLLLILGLIVMAGV 144
Score = 44.0 bits (99), Expect = 4e-04
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 321 WGSSTEGQRYQDTVSFITELSHRVTHSRSYNPQLLVLAGT--PLQRPALIDVAHMLTKIG 378
WG G + L + HSR++ PQLLVLA ++ L
Sbjct: 538 WGDGLRGLGLSAARFALLNLDDKPQHSRNWRPQLLVLAPDVESANTNGILSFVSQLKAGK 597
Query: 379 SFMIVADITDTALTKGERVSRQHIGEQF---VKYRKLRAFYVLLQGLDLKRGANALMQAS 435
+VA + + Q + E+ VK K++ F +L ++ G + L+Q S
Sbjct: 598 GLTLVAHCMEGEYADNY-LKAQAVQEKLKAVVKKNKIKGFCDVLVTSNVIEGISCLVQTS 656
Query: 436 GLGKLSPNILLIGFKKDW 453
GLG + N +++ + DW
Sbjct: 657 GLGGMRHNTVVLSWPNDW 674
Score = 43.2 bits (97), Expect = 7e-04
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 581 ALSFRALSFNCKQYVDAWWLYEDGGLNILLPYIIARRGYKHKLPLRIFAITKEQHKREFE 640
A F A ++D WW+ DGGL +LLP+++ + +R+FAI + +
Sbjct: 706 AEKFPANGTKVSGFIDVWWVVHDGGLLMLLPFLLRQHKTWKNTTVRLFAIAQMEDNNVQM 765
Query: 641 NKCMESLLKKFRIE 654
+E L RI+
Sbjct: 766 KTDLEKFLYHLRID 779
Score = 33.1 bits (72), Expect = 0.76
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 717 QHSTKAAIVIITLPLPRKV-SASLYMAWLEVLSRDLPPVLFVRGNDSCVL 765
Q S+ A +V + LP P S S YM ++E L+ L VL VRG + V+
Sbjct: 924 QKSSDAQLVFVNLPGPPDADSDSYYMDFIEALTEGLDRVLLVRGTGAEVV 973
>Z92829-4|CAD54131.1| 569|Caenorhabditis elegans Hypothetical
protein F10A3.4 protein.
Length = 569
Score = 29.5 bits (63), Expect = 9.3
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
Query: 112 LIGPSSDVERAKGF-VGINLQTIRENWLPNFRYSEGREHDFFSVFAVYFPAVTGVQAGAN 170
+IG +DV+ F G NL + + Y+ G + S F++YF +T VQ G
Sbjct: 200 MIGSLADVDYYMTFSTGKNLSIVNFYGDGSSSYALGNDASTISSFSLYFLYMTRVQTG-- 257
Query: 171 ICGDLKNPAVAIPKGTLLALAISVTSYFTMVILSGMGALRDASGNVANL 219
I G L T + + S T Y+T + M +GNV N+
Sbjct: 258 ITGTLAGTTTNGAAYTFICVDCS-TFYWTRLQFDSM-----VNGNVTNV 300
>Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical
protein F39H11.5 protein.
Length = 236
Score = 29.5 bits (63), Expect = 9.3
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 359 GTPLQRPALIDVAHMLTKIGSFMIVADITDTALTKGERVSRQHIGEQFVKYRKLRAFYVL 418
G Q+ V H+ T +G+F++ + D KGE +SR+ K +L ++
Sbjct: 138 GVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSREEAEAVLRKSLELTLYHDC 197
Query: 419 LQGLDLKRGANALMQASGLGKLSPNILLIGFKKDWTNAE 457
+ + + G + LGK +IG DW+ AE
Sbjct: 198 VADNEFEIGRVDATEGVVLGKEEK---IIG---DWSIAE 230
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.136 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,039,284
Number of Sequences: 27539
Number of extensions: 587254
Number of successful extensions: 1344
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1263
Number of HSP's gapped (non-prelim): 46
length of query: 767
length of database: 12,573,161
effective HSP length: 87
effective length of query: 680
effective length of database: 10,177,268
effective search space: 6920542240
effective search space used: 6920542240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -