Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001472-TA|BGIBMGA001472-PA|IPR004842|Na-K-Cl
cotransporter superfamily, IPR002443|Na-K-Cl co-transporter,
IPR004841|Amino acid permease-associated region
(1036 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g30450.3 68414.m03722 cation-chloride cotransporter, putative... 166 6e-41
At1g30450.2 68414.m03721 cation-chloride cotransporter, putative... 166 6e-41
At1g30450.1 68414.m03720 cation-chloride cotransporter, putative... 166 6e-41
At3g10600.1 68416.m01275 amino acid permease family protein simi... 39 0.015
At5g36940.1 68418.m04430 amino acid permease family protein simi... 32 1.7
At5g05630.1 68418.m00614 amino acid permease family protein weak... 32 2.3
At1g18420.1 68414.m02300 expressed protein contains Pfam profile... 31 3.0
At1g17120.1 68414.m02086 amino acid permease family protein low ... 31 3.0
At5g27100.1 68418.m03235 glutamate receptor family protein (GLR2... 30 7.0
At1g58030.1 68414.m06577 amino acid permease family protein simi... 30 9.2
>At1g30450.3 68414.m03722 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 166 bits (404), Expect = 6e-41
Identities = 98/293 (33%), Positives = 156/293 (53%), Gaps = 28/293 (9%)
Query: 98 TEEGVLIPCLLNIWGVMLFLRISWVVSQAGIGWSLVIIALSAVVCVITTLSMSAICTNGE 157
T GV +PCL NI G++ ++R +W+V AGIG LV++ L + +TT+S+SAI TNG
Sbjct: 134 TMMGVFVPCLQNILGIIYYIRFTWIVGMAGIGQGLVLVFLCGLCTFLTTISLSAIATNGA 193
Query: 158 VKGGGIYYIISRSLGPEFGASVGIIFAFANAVAASMNTIGFCDSMNHLLKSLDL------ 211
+KGGG YY+I R+LGPE G S+G+ F NAVA ++ +G ++ + +
Sbjct: 194 MKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGALYVLGAVETFLKAFPAAGIFRETIT 253
Query: 212 ---------QIIDNSYNDVRIIGAIALFVMCVICAVGMDWESK-AQNFLIAIIVGAIVDF 261
I + +D+++ G + ++C I G+ ++ A FL+ +++ F
Sbjct: 254 KVNGTAVSESIQSPNSHDLQVYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLLSIFCIF 313
Query: 262 VVGAVMGPKSNLEVAEGFVGLSTSTFVENFNSDFKYSE---------GMEQNFFSVFAIF 312
+G + + + G GL +F +N+ S ++ + G +F + +F
Sbjct: 314 -IGIFLAKTDDPD--NGITGLRLKSFKDNWGSAYQMTNDAGIPDPTGGTYWSFNELVGLF 370
Query: 313 FPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSYAMMVLFTGAAALRD 365
FP+VTGI AG+N S LKD +IP GTL A L + Y + VLF GA A RD
Sbjct: 371 FPAVTGIMAGSNRSASLKDTQKSIPVGTLAATLTTTSLYLISVLFFGAVATRD 423
Score = 118 bits (284), Expect = 2e-26
Identities = 90/343 (26%), Positives = 148/343 (43%), Gaps = 22/343 (6%)
Query: 413 AWGPF---IYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEAYRG 469
AW PF ++ G PRL+ A+ D I P L +F E +
Sbjct: 436 AW-PFPAIVHVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFK--VADTSEPHIA 492
Query: 470 YXXXXXXXXXXXXIAKLNAIAPLISNFYLASYALINFCTFHAALVRPLGWRPTFKYYNVW 529
I L+ I P ++ FYL Y+ +N F L+ WRP +KY++
Sbjct: 493 TLFTAFICIGCVVIGNLDLITPTVTMFYLLCYSGVNLSCFLLDLLDAPSWRPRWKYHHWS 552
Query: 530 VSLAGFLMCVGIMLLISWIMSLVTIAIFFTLYLIVHYRNPDVNWGSSTQAQMYKTALSSA 589
+S G +C+ IM LISW ++V IA+ +Y V + +WG ++ ++ AL S
Sbjct: 553 LSFVGASLCIVIMFLISWSFTVVAIALASLIYKYVGLKGKAGDWGDGFKSAYFQLALRSL 612
Query: 590 HNLARTGEHVKNYWPQLLV-------LGGRAHARPPLVDLGSLITKAGSLMIIGDISKEK 642
+L H KN++P LV L P L D + + K G M I +S
Sbjct: 613 RSLGANQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANCMKKKGRGMSI-FVSILD 671
Query: 643 LSYKVCSARARADNE----WLQERKVRAFCSLVHGFNFEQGARALIQATGVGKLAPNVLL 698
Y C+ A+ + +++ ++ +V N +G R +IQ G+G L PN+++
Sbjct: 672 GDYYECAEEAKEACKQLATYIEYKRCEGVAEIVVAPNMTEGFRGIIQTMGLGNLKPNIVV 731
Query: 699 MGYKSDWTTASAEDLVAYF-NVLHTAFENRLAVAIVRVRGGLD 740
M Y W + ++ + F +++ AV I++ GLD
Sbjct: 732 MRYPEIWRRENLTEIPSTFVGIINDCITANKAVVIIK---GLD 771
Score = 55.2 bits (127), Expect = 2e-07
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 853 KQESGTVDVWWLYDDVGLTILLPYIISQRSAWGNCKLRIFXXXXXXXXXXXXXXXXXXXX 912
+++ GT+D++W+ D GL +LL ++ + ++ +CK+++F
Sbjct: 778 QRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQLFCIAEEDSDAEALKADVKKFL 837
Query: 913 SKFRIDYSSLTMVQ---DITEPPQAETKAL--FDETIKKFTSDSAAPECRISETELTTLS 967
R+ + + DI ++ +L FD ++ SD R L +
Sbjct: 838 YDLRMHAEVIVVTMKSWDIRSEGNSQEDSLEAFDAAQRRI-SDYLGEIKRQGSNPLLA-N 895
Query: 968 GK---TNRQ---------LRLRELLLANSRDSRLIVMSLPMPRKGSVSAPLYMAWLEMMS 1015
GK N Q L+L +L+ SR + ++++SLP P A YM +++++
Sbjct: 896 GKPMVVNEQQVEKFLYTMLKLNSTILSYSRMAAVVLVSLPPPPLNH-PAYFYMEYMDLLV 954
Query: 1016 RDLPPMLFVRGNHTSVLTFYS 1036
++P ML VRG H V+T ++
Sbjct: 955 ENVPRMLIVRGYHRDVVTLFT 975
>At1g30450.2 68414.m03721 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 166 bits (404), Expect = 6e-41
Identities = 98/293 (33%), Positives = 156/293 (53%), Gaps = 28/293 (9%)
Query: 98 TEEGVLIPCLLNIWGVMLFLRISWVVSQAGIGWSLVIIALSAVVCVITTLSMSAICTNGE 157
T GV +PCL NI G++ ++R +W+V AGIG LV++ L + +TT+S+SAI TNG
Sbjct: 134 TMMGVFVPCLQNILGIIYYIRFTWIVGMAGIGQGLVLVFLCGLCTFLTTISLSAIATNGA 193
Query: 158 VKGGGIYYIISRSLGPEFGASVGIIFAFANAVAASMNTIGFCDSMNHLLKSLDL------ 211
+KGGG YY+I R+LGPE G S+G+ F NAVA ++ +G ++ + +
Sbjct: 194 MKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGALYVLGAVETFLKAFPAAGIFRETIT 253
Query: 212 ---------QIIDNSYNDVRIIGAIALFVMCVICAVGMDWESK-AQNFLIAIIVGAIVDF 261
I + +D+++ G + ++C I G+ ++ A FL+ +++ F
Sbjct: 254 KVNGTAVSESIQSPNSHDLQVYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLLSIFCIF 313
Query: 262 VVGAVMGPKSNLEVAEGFVGLSTSTFVENFNSDFKYSE---------GMEQNFFSVFAIF 312
+G + + + G GL +F +N+ S ++ + G +F + +F
Sbjct: 314 -IGIFLAKTDDPD--NGITGLRLKSFKDNWGSAYQMTNDAGIPDPTGGTYWSFNELVGLF 370
Query: 313 FPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSYAMMVLFTGAAALRD 365
FP+VTGI AG+N S LKD +IP GTL A L + Y + VLF GA A RD
Sbjct: 371 FPAVTGIMAGSNRSASLKDTQKSIPVGTLAATLTTTSLYLISVLFFGAVATRD 423
Score = 118 bits (284), Expect = 2e-26
Identities = 90/343 (26%), Positives = 148/343 (43%), Gaps = 22/343 (6%)
Query: 413 AWGPF---IYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEAYRG 469
AW PF ++ G PRL+ A+ D I P L +F E +
Sbjct: 436 AW-PFPAIVHVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFK--VADTSEPHIA 492
Query: 470 YXXXXXXXXXXXXIAKLNAIAPLISNFYLASYALINFCTFHAALVRPLGWRPTFKYYNVW 529
I L+ I P ++ FYL Y+ +N F L+ WRP +KY++
Sbjct: 493 TLFTAFICIGCVVIGNLDLITPTVTMFYLLCYSGVNLSCFLLDLLDAPSWRPRWKYHHWS 552
Query: 530 VSLAGFLMCVGIMLLISWIMSLVTIAIFFTLYLIVHYRNPDVNWGSSTQAQMYKTALSSA 589
+S G +C+ IM LISW ++V IA+ +Y V + +WG ++ ++ AL S
Sbjct: 553 LSFVGASLCIVIMFLISWSFTVVAIALASLIYKYVGLKGKAGDWGDGFKSAYFQLALRSL 612
Query: 590 HNLARTGEHVKNYWPQLLV-------LGGRAHARPPLVDLGSLITKAGSLMIIGDISKEK 642
+L H KN++P LV L P L D + + K G M I +S
Sbjct: 613 RSLGANQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANCMKKKGRGMSI-FVSILD 671
Query: 643 LSYKVCSARARADNE----WLQERKVRAFCSLVHGFNFEQGARALIQATGVGKLAPNVLL 698
Y C+ A+ + +++ ++ +V N +G R +IQ G+G L PN+++
Sbjct: 672 GDYYECAEEAKEACKQLATYIEYKRCEGVAEIVVAPNMTEGFRGIIQTMGLGNLKPNIVV 731
Query: 699 MGYKSDWTTASAEDLVAYF-NVLHTAFENRLAVAIVRVRGGLD 740
M Y W + ++ + F +++ AV I++ GLD
Sbjct: 732 MRYPEIWRRENLTEIPSTFVGIINDCITANKAVVIIK---GLD 771
Score = 55.2 bits (127), Expect = 2e-07
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 853 KQESGTVDVWWLYDDVGLTILLPYIISQRSAWGNCKLRIFXXXXXXXXXXXXXXXXXXXX 912
+++ GT+D++W+ D GL +LL ++ + ++ +CK+++F
Sbjct: 778 QRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQLFCIAEEDSDAEALKADVKKFL 837
Query: 913 SKFRIDYSSLTMVQ---DITEPPQAETKAL--FDETIKKFTSDSAAPECRISETELTTLS 967
R+ + + DI ++ +L FD ++ SD R L +
Sbjct: 838 YDLRMHAEVIVVTMKSWDIRSEGNSQEDSLEAFDAAQRRI-SDYLGEIKRQGSNPLLA-N 895
Query: 968 GK---TNRQ---------LRLRELLLANSRDSRLIVMSLPMPRKGSVSAPLYMAWLEMMS 1015
GK N Q L+L +L+ SR + ++++SLP P A YM +++++
Sbjct: 896 GKPMVVNEQQVEKFLYTMLKLNSTILSYSRMAAVVLVSLPPPPLNH-PAYFYMEYMDLLV 954
Query: 1016 RDLPPMLFVRGNHTSVLTFYS 1036
++P ML VRG H V+T ++
Sbjct: 955 ENVPRMLIVRGYHRDVVTLFT 975
>At1g30450.1 68414.m03720 cation-chloride cotransporter, putative
similar to cation-chloride co-transporter GB:AAC49874
GI:2582381 from [Nicotiana tabacum], Cation-Chloride
Cotransporter (CCC) Family Member, PMID:11500563
Length = 975
Score = 166 bits (404), Expect = 6e-41
Identities = 98/293 (33%), Positives = 156/293 (53%), Gaps = 28/293 (9%)
Query: 98 TEEGVLIPCLLNIWGVMLFLRISWVVSQAGIGWSLVIIALSAVVCVITTLSMSAICTNGE 157
T GV +PCL NI G++ ++R +W+V AGIG LV++ L + +TT+S+SAI TNG
Sbjct: 134 TMMGVFVPCLQNILGIIYYIRFTWIVGMAGIGQGLVLVFLCGLCTFLTTISLSAIATNGA 193
Query: 158 VKGGGIYYIISRSLGPEFGASVGIIFAFANAVAASMNTIGFCDSMNHLLKSLDL------ 211
+KGGG YY+I R+LGPE G S+G+ F NAVA ++ +G ++ + +
Sbjct: 194 MKGGGPYYLIGRALGPEVGISIGLCFFLGNAVAGALYVLGAVETFLKAFPAAGIFRETIT 253
Query: 212 ---------QIIDNSYNDVRIIGAIALFVMCVICAVGMDWESK-AQNFLIAIIVGAIVDF 261
I + +D+++ G + ++C I G+ ++ A FL+ +++ F
Sbjct: 254 KVNGTAVSESIQSPNSHDLQVYGIVVTILLCFIVFGGVKMINRVAPAFLVPVLLSIFCIF 313
Query: 262 VVGAVMGPKSNLEVAEGFVGLSTSTFVENFNSDFKYSE---------GMEQNFFSVFAIF 312
+G + + + G GL +F +N+ S ++ + G +F + +F
Sbjct: 314 -IGIFLAKTDDPD--NGITGLRLKSFKDNWGSAYQMTNDAGIPDPTGGTYWSFNELVGLF 370
Query: 313 FPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSYAMMVLFTGAAALRD 365
FP+VTGI AG+N S LKD +IP GTL A L + Y + VLF GA A RD
Sbjct: 371 FPAVTGIMAGSNRSASLKDTQKSIPVGTLAATLTTTSLYLISVLFFGAVATRD 423
Score = 118 bits (284), Expect = 2e-26
Identities = 90/343 (26%), Positives = 148/343 (43%), Gaps = 22/343 (6%)
Query: 413 AWGPF---IYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEAYRG 469
AW PF ++ G PRL+ A+ D I P L +F E +
Sbjct: 436 AW-PFPAIVHVGIILSTLGAALQSLTGAPRLLAAIANDDILPILNYFK--VADTSEPHIA 492
Query: 470 YXXXXXXXXXXXXIAKLNAIAPLISNFYLASYALINFCTFHAALVRPLGWRPTFKYYNVW 529
I L+ I P ++ FYL Y+ +N F L+ WRP +KY++
Sbjct: 493 TLFTAFICIGCVVIGNLDLITPTVTMFYLLCYSGVNLSCFLLDLLDAPSWRPRWKYHHWS 552
Query: 530 VSLAGFLMCVGIMLLISWIMSLVTIAIFFTLYLIVHYRNPDVNWGSSTQAQMYKTALSSA 589
+S G +C+ IM LISW ++V IA+ +Y V + +WG ++ ++ AL S
Sbjct: 553 LSFVGASLCIVIMFLISWSFTVVAIALASLIYKYVGLKGKAGDWGDGFKSAYFQLALRSL 612
Query: 590 HNLARTGEHVKNYWPQLLV-------LGGRAHARPPLVDLGSLITKAGSLMIIGDISKEK 642
+L H KN++P LV L P L D + + K G M I +S
Sbjct: 613 RSLGANQVHPKNWYPIPLVFCRPWGQLPENVPCHPKLADFANCMKKKGRGMSI-FVSILD 671
Query: 643 LSYKVCSARARADNE----WLQERKVRAFCSLVHGFNFEQGARALIQATGVGKLAPNVLL 698
Y C+ A+ + +++ ++ +V N +G R +IQ G+G L PN+++
Sbjct: 672 GDYYECAEEAKEACKQLATYIEYKRCEGVAEIVVAPNMTEGFRGIIQTMGLGNLKPNIVV 731
Query: 699 MGYKSDWTTASAEDLVAYF-NVLHTAFENRLAVAIVRVRGGLD 740
M Y W + ++ + F +++ AV I++ GLD
Sbjct: 732 MRYPEIWRRENLTEIPSTFVGIINDCITANKAVVIIK---GLD 771
Score = 55.2 bits (127), Expect = 2e-07
Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 853 KQESGTVDVWWLYDDVGLTILLPYIISQRSAWGNCKLRIFXXXXXXXXXXXXXXXXXXXX 912
+++ GT+D++W+ D GL +LL ++ + ++ +CK+++F
Sbjct: 778 QRQYGTIDLYWIVRDGGLMLLLSQLLLTKESFESCKIQLFCIAEEDSDAEALKADVKKFL 837
Query: 913 SKFRIDYSSLTMVQ---DITEPPQAETKAL--FDETIKKFTSDSAAPECRISETELTTLS 967
R+ + + DI ++ +L FD ++ SD R L +
Sbjct: 838 YDLRMHAEVIVVTMKSWDIRSEGNSQEDSLEAFDAAQRRI-SDYLGEIKRQGSNPLLA-N 895
Query: 968 GK---TNRQ---------LRLRELLLANSRDSRLIVMSLPMPRKGSVSAPLYMAWLEMMS 1015
GK N Q L+L +L+ SR + ++++SLP P A YM +++++
Sbjct: 896 GKPMVVNEQQVEKFLYTMLKLNSTILSYSRMAAVVLVSLPPPPLNH-PAYFYMEYMDLLV 954
Query: 1016 RDLPPMLFVRGNHTSVLTFYS 1036
++P ML VRG H V+T ++
Sbjct: 955 ENVPRMLIVRGYHRDVVTLFT 975
>At3g10600.1 68416.m01275 amino acid permease family protein similar
to SP|Q09143 High-affinity cationic amino acid
transporter-1 (CAT-1) {Mus musculus}; contains Pfam
profile PF00324: Amino acid permease
Length = 584
Score = 39.1 bits (87), Expect = 0.015
Identities = 54/235 (22%), Positives = 103/235 (43%), Gaps = 19/235 (8%)
Query: 129 GWSLVI-IALSAVVCVITTLSMSAICTNGEVKGGGIYYI-ISRSLGPEF--GASVGIIFA 184
G S+V+ A++ + +++ + + V GG YI I+ P F GA++ + +
Sbjct: 91 GPSIVVSYAIAGLCALLSAFCYTEFAVHLPVAGGAFSYIRITFGEFPAFITGANLIMDYV 150
Query: 185 FANAVAASMNT--IGFCDSMNHLLKSLDLQIIDNSYNDVRIIGAIALFVMCVICAVGMDW 242
+NA + T +G ++ + + N +N++ I I + + +
Sbjct: 151 LSNAAVSRGFTAYLGSAFGISTSEWRFIVSGLPNGFNEIDPIAVIVVLAVTFVICYSTRE 210
Query: 243 ESKAQNFLIAIIVGAIVDFVVGAVMGPKSNLEVAEGFV-GLSTSTFVENFNSDFKYSEGM 301
SK L A+ + IV FV+ VMG ++G V L+ EN + F +
Sbjct: 211 SSKVNMVLTALHIAFIV-FVI--VMG------FSKGDVKNLTRPDNPENPSGFFPFGVS- 260
Query: 302 EQNFFSVFAIFFPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSYAMMVL 356
F+ A+ + S G A + ++ ++KDP IP G ++ I +V Y +M +
Sbjct: 261 --GVFNGAAMVYLSYIGYDAVSTMAEEVKDPVKDIPMGISGSVAIVIVLYCLMAI 313
>At5g36940.1 68418.m04430 amino acid permease family protein similar
to SP|Q09143 High-affinity cationic amino acid
transporter-1 (CAT-1) {Mus musculus}; contains Pfam
profile PF00324: Amino acid permease
Length = 609
Score = 32.3 bits (70), Expect = 1.7
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 14/129 (10%)
Query: 226 AIALFVMCVICAVGMDWESKAQNFLIAIIVGAIVDFVVGAVMGPKSNLEVAEGFVGLSTS 285
A+ +F++ +C +G+ K F I+ A V FV+ V+ S L G+VG
Sbjct: 168 AVLVFIVTGLCCLGV----KESTFAQGIVTTANV-FVMIFVIVAGSYLCFKTGWVGYELP 222
Query: 286 TFVENFNSDFKYSEGMEQNFFSVFAIFFPSVTGIQAGANISGDLKDPASAIPKGTLLALL 345
T F Y G++ +FF + G A+++ ++K+P +P G ++LL
Sbjct: 223 T------GYFPY--GVDGMLTGSATVFFAYI-GFDTVASMAEEVKNPRRDLPLGIGISLL 273
Query: 346 ISMVSYAMM 354
+ + Y M+
Sbjct: 274 LCCLLYMMV 282
>At5g05630.1 68418.m00614 amino acid permease family protein weak
similarity to y+LAT1a (amino acid transporter) [Mus
musculus] GI:3970791; contains Pfam profile PF00324:
Amino acid permease
Length = 490
Score = 31.9 bits (69), Expect = 2.3
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 323 ANISGDLKDPASAIPKGTLLALLISMVSYAMMVLF-TGAAAL 363
+ ++G++++P+ +P+ ALL+ + SY VL TGA AL
Sbjct: 252 STLTGEVENPSKTLPRALFYALLLVVFSYIFPVLTGTGAIAL 293
>At1g18420.1 68414.m02300 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 581
Score = 31.5 bits (68), Expect = 3.0
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 569 PDVNWGSSTQAQMYKTALSSAHNLARTGEHVKNYWPQLLVLGGRAHARPPLVDLGSLITK 628
P NW T A +A + +RT H + WP + + + +PPL + G +
Sbjct: 480 PPKNWDDVTTAANLSSATMLPYLQSRTMIHKQPSWPSRISITPGSMLQPPLGEPGKMYES 539
Query: 629 AGSLMI 634
A +L +
Sbjct: 540 ASNLSL 545
>At1g17120.1 68414.m02086 amino acid permease family protein low
similarity to SP|O43246 Cationic amino acid
transporter-4 (CAT-4) {Homo sapiens}; contains Pfam
profile PF00324: Amino acid permease
Length = 590
Score = 31.5 bits (68), Expect = 3.0
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 34/243 (13%)
Query: 124 SQAGIGWSLVI-IALSAVVCVITTLSMSAICTNGEVKGGGIYYIISRSLGPEFGASVGII 182
++ G G ++V+ A+S V +++ L + V GG Y L E G + I
Sbjct: 111 ARVGAGPAVVLSYAISGVSALLSVLCYAEFGVEIPVAGGSFSY-----LRVELGDFIAFI 165
Query: 183 FAFANAVAASMNTIGFCDSMNHLLKSL---DLQI----IDNSYNDVRIIGAIALFVMCVI 235
A + A + G S + L SL D +D+ ++ +A+ V+ V
Sbjct: 166 AAGNILLEAMVGAAGLGRSWSSYLASLVKNDSDYFRIKVDSFAKGFDLLDPVAVAVLLVA 225
Query: 236 CAVGMDWESKAQ--NFLIAIIVGAIVDFVVGAVMGPKSNLEVAEGFVGLSTSTFVENFNS 293
+ M + N + +++ I+ F+V GF TS V F
Sbjct: 226 NGIAMTGTKRTSWLNLITSMVTVCIIVFIV------------VVGFTHSKTSNLVPFFPY 273
Query: 294 DFKYSEGMEQNFFSVFAIFFPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSYAM 353
K G+ Q+ A+ + S TG AN++ + + P+ IP G + ++ + V Y +
Sbjct: 274 GAK---GVVQSA----AVVYWSYTGFDMVANMAEETEKPSRDIPIGLVGSMSMITVVYCL 326
Query: 354 MVL 356
M L
Sbjct: 327 MAL 329
>At5g27100.1 68418.m03235 glutamate receptor family protein (GLR2.1)
(GLR3) plant glutamate receptor family, PMID:11379626
Length = 909
Score = 30.3 bits (65), Expect = 7.0
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 542 MLLISWIMSLVTIAIF-FTLYLIVHYRNPDVNWGSSTQAQMYKTAL------SSAHNLAR 594
+ L W++SL++ I ++++ H NPD + Q A S H A
Sbjct: 574 LTLALWLISLLSFFIIGLVVWVLEHRVNPDFDGPGQYQLSTIFCAAPIPKMSSCLHLNAS 633
Query: 595 TGEHVKNYWPQLLVL 609
TGE V ++W +++V+
Sbjct: 634 TGERVLSFWARVVVI 648
>At1g58030.1 68414.m06577 amino acid permease family protein similar
to SP|P18581 Low-affinity cationic amino acid
transporter-2 (CAT-2) (T-cell early activation protein)
{Mus musculus}; contains Pfam profile PF00324: Amino
acid permease
Length = 635
Score = 29.9 bits (64), Expect = 9.2
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 226 AIALFVMCVICAVGMDWESKAQNFLIAIIVGAIVDFVV-GAVMGPKSNLEVAEGFVGLST 284
AI +FV+ + +G+ + AQ + A+ V ++ +V G+ +G K+ G+ G
Sbjct: 179 AILVFVVTGLLCMGIKESTFAQGIVTAVNVCVLLFVIVAGSYLGFKT------GWPGYEL 232
Query: 285 STFVENFNSDFKYSEGMEQNFFSVFAIFFPSVTGIQAGANISGDLKDPASAIPKGTLLAL 344
T F D GM +VF F G + A+ + ++++P +P G LAL
Sbjct: 233 PTGFFPFGVD-----GMFAGSATVFFAFI----GFDSVASTAEEVRNPQRDLPIGIGLAL 283
Query: 345 LISMVSYAMM 354
L+ Y M+
Sbjct: 284 LLCCSLYMMV 293
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.136 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,304,675
Number of Sequences: 28952
Number of extensions: 799576
Number of successful extensions: 1887
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1867
Number of HSP's gapped (non-prelim): 22
length of query: 1036
length of database: 12,070,560
effective HSP length: 88
effective length of query: 948
effective length of database: 9,522,784
effective search space: 9027599232
effective search space used: 9027599232
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 64 (29.9 bits)
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