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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001472-TA|BGIBMGA001472-PA|IPR004842|Na-K-Cl
cotransporter superfamily, IPR002443|Na-K-Cl co-transporter,
IPR004841|Amino acid permease-associated region
         (1036 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)             476   e-134
SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.)             278   2e-74
SB_27714| Best HMM Match : AA_permease (HMM E-Value=0.29)             174   4e-43
SB_57568| Best HMM Match : PqiA (HMM E-Value=0.3)                      60   7e-09
SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.)               46   2e-04
SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   0.003
SB_16238| Best HMM Match : Nucleos_tra2_C (HMM E-Value=0.71)           33   1.6  
SB_29563| Best HMM Match : IncA (HMM E-Value=0.37)                     32   2.1  
SB_5731| Best HMM Match : OAR (HMM E-Value=2.8)                        32   2.1  
SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   2.8  
SB_7380| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   2.8  
SB_42509| Best HMM Match : DUF533 (HMM E-Value=0.14)                   32   2.8  
SB_4240| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   3.6  
SB_17284| Best HMM Match : IncA (HMM E-Value=0.24)                     31   4.8  
SB_15314| Best HMM Match : DoxX (HMM E-Value=0.17)                     31   4.8  
SB_18435| Best HMM Match : Beta_elim_lyase (HMM E-Value=7.1)           31   4.8  
SB_27647| Best HMM Match : IncA (HMM E-Value=0.78)                     31   6.4  
SB_5590| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   8.4  
SB_4044| Best HMM Match : IncA (HMM E-Value=0.44)                      30   8.4  

>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 873

 Score =  476 bits (1174), Expect = e-134
 Identities = 258/620 (41%), Positives = 356/620 (57%), Gaps = 40/620 (6%)

Query: 100 EGVLIPCLLNIWGVMLFLRISWVVSQAGIGWSLVIIALSAVVCVITTLSMSAICTNGEVK 159
           +GV   CLLNIWGVML+LR+SWVV QAGIG + VII LSAVV  +TTLSMSAICTNGEVK
Sbjct: 27  KGVFFGCLLNIWGVMLYLRLSWVVGQAGIGLATVIIMLSAVVTTVTTLSMSAICTNGEVK 86

Query: 160 GGGIYYIISRSLGPEFGASVGIIFAFANAVAASMNTIGFCDSMNHLLKSLDLQIIDNSYN 219
           GGG YY+ISRSLGPEFG S+GIIF+ A+AVA +M  +GF +++  LLK     I+D   N
Sbjct: 87  GGGAYYLISRSLGPEFGGSIGIIFSIASAVAVAMYVVGFAETVRDLLKENGALIVDE-VN 145

Query: 220 DVRIIGAIALFVMCVICAVGMDWESKAQNFLIAIIVGAIVDFVVGAVMGPKSNLEVAEGF 279
           DVRIIG I +  +  +  VG+ W  + Q  L+A+++ +I+D ++G  +GP++    A+GF
Sbjct: 146 DVRIIGLITIVFILAVALVGLKWVVRTQVILLAVLIISILDVIIGTFIGPQNASSKAQGF 205

Query: 280 VGLSTSTFVENFNSDFKYSEGMEQNFFSVFAIFFPSVTGIQAGANISGDLKDPASAIPKG 339
           +G     F  NF  DF+  EG    FFSVFAIFFP+ TGI AG NISGDLK+P +A+PKG
Sbjct: 206 LGYQDGVFQTNFMPDFR-GEG----FFSVFAIFFPAATGILAGVNISGDLKNPHTAVPKG 260

Query: 340 TLLALLISMVSYAMMVLFTGAAALRDASGNITDLVISNGTVTNYSAVSQCANSTLFPCKY 399
           TLLA+L+S + Y ++    GA   RDA+G +  + + NG+  + S V+         C +
Sbjct: 261 TLLAILVSSLVYIVLAWLIGATYARDATGLVMSVAVVNGS--SQSNVTSIPTCDTMKCLF 318

Query: 400 GMHVDFEIMQLMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKP 459
           G++ D + MQ  S WGP + AG +              P+  QA+  D+++P + +F   
Sbjct: 319 GLYFDNQAMQKASGWGPIVTAGIFASTLSSAIASIVGAPKTFQAVCKDKLFPKIDYFGVG 378

Query: 460 YGRHGEAYRGYXXXXXXXXXXXXIAKLNAIAPLISNFYLASYALINFCTFHAALVRPLGW 519
           YG   E  RGY            I  LNAIAP+ISNF+L  YALIN+ TF A+L R  GW
Sbjct: 379 YGPGNEPKRGYVLAFLIACAFTAIGDLNAIAPIISNFFLIVYALINYATFVASLGRSPGW 438

Query: 520 RPTFKYYNVWV-------------------SLAGFLMCVGIMLLISW-----------IM 549
           RP+F++YN+WV                   +L   ++ VG+   + +             
Sbjct: 439 RPSFRFYNMWVSLIGALLCVAIMFLINWWAALVTIMIVVGLYKFVDYRKPNDNEIERDSF 498

Query: 550 SLVTIAIFFTLYLIVHYRN-PDVNWGSSTQAQMYKTALSSAHNLARTGEHVKNYWPQLLV 608
           + V + +FF     +       VNWGSS QA  Y +AL     L    EHVKN+ PQ LV
Sbjct: 499 AFVNVPVFFVKVPNIKTEPFSQVNWGSSGQANTYMSALRFTTLLDTHEEHVKNFRPQCLV 558

Query: 609 LGGRAHARPPLVDLGSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKVRAFC 668
           L GR   RP L+ + S +TK   LM+ G++ ++K   K+     R D +WL+E K++AF 
Sbjct: 559 LSGRPAERPDLMYIASQLTKNSGLMMYGNVCRQKFD-KISDDEEREDAKWLKEHKIKAFR 617

Query: 669 SLVHGFNFEQGARALIQATG 688
           +     +   G   L    G
Sbjct: 618 ATTTAHSLRTGIAPLADLEG 637



 Score =  125 bits (301), Expect = 2e-28
 Identities = 74/188 (39%), Positives = 99/188 (52%), Gaps = 13/188 (6%)

Query: 850  FKRKQESGTVDVWWLYDDVGLTILLPYIISQRSAWGNCKLRIFXXXXXXXXXXXXXXXXX 909
            F+ KQ  GT+DVWWLYDD GLTILLPY+++    W +C LR+F                 
Sbjct: 698  FEGKQR-GTIDVWWLYDDGGLTILLPYLLTLHRLWRSCDLRLFYLDIRSKHAIKADQLKM 756

Query: 910  XXX-SKFRIDYSSLTMVQDITEPPQAETKALFDETIKKFTSDSAAPECRISETELTTLSG 968
                 KFRI  SS+  V      P  E+   F           A P  R  +        
Sbjct: 757  ANLMKKFRIQVSSVVQVPGANTAPSGESLDAF----------RALPVGRELDDGPID-DK 805

Query: 969  KTNRQLRLRELLLANSRDSRLIVMSLPMPRKGSVSAPLYMAWLEMMSRDLPPMLFVRGNH 1028
            K  R +R+ EL+   S +++L+V+SLP+P     +  +YM+WLEM+S+DLPP+L VRGN 
Sbjct: 806  KVLRTIRIGELVRKRSNNAKLVVISLPVPVAEMTTPLMYMSWLEMLSKDLPPVLLVRGNQ 865

Query: 1029 TSVLTFYS 1036
             SVLTFYS
Sbjct: 866  RSVLTFYS 873


>SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 766

 Score =  278 bits (681), Expect = 2e-74
 Identities = 140/333 (42%), Positives = 194/333 (58%), Gaps = 6/333 (1%)

Query: 408 MQLMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYPGLIFFSKPYGRHGEAY 467
           M+ MSAWGP +  G +              P+  QAL  D I+P + +F    G   E  
Sbjct: 1   MEKMSAWGPLVTCGIFAATLSSALASLVGAPKTFQALCKDNIFPYIGYFGIGVGPGEEPR 60

Query: 468 RGYXXXXXXXXXXXXIAKLNAIAPLISNFYLASYALINFCTFHAALVRPLGWRPTFKYYN 527
           RGY            +  LN IAP+ISNF+L SYALIN+  F A+L R  GWRP+F+YYN
Sbjct: 61  RGYILTFIIAVGFVAVGNLNVIAPVISNFFLMSYALINYAVFAASLGRSPGWRPSFRYYN 120

Query: 528 VWVSLAGFLMCVGIMLLISWIMSLVTIAIFFTLYLIVHYRNPDVNWGSSTQAQMYKTALS 587
           +WVSL G L+CV IM LI+W  +LVTIAI  +L+  V  + P+VNWGSS QA  Y  AL 
Sbjct: 121 MWVSLVGALLCVAIMFLINWWAALVTIAIIASLHKYVDIKKPEVNWGSSAQAFTYIQALR 180

Query: 588 SAHNLARTGEHVKNYWPQLLVLGGRAHARPPLVDLGSLITKAGSLMIIGDISKEKLSYKV 647
            A+ L  T +HVKN+ PQ LVL G   +RP L  + S ITK   LM+ G ++   L    
Sbjct: 181 FAYRLNNTEDHVKNFRPQCLVLTGAPSSRPNLTYIVSQITKNVGLMVCGQVNVGSL---- 236

Query: 648 CSARARADNEWLQERKVRAFCSLVHGFNFEQGARALIQATGVGKLAPNVLLMGYKSDWTT 707
              + +++ +WL+ERK+RAF ++    +   G ++L+Q  G+GKL PN L++G+K +W  
Sbjct: 237 --CQVKSEKDWLRERKIRAFHTVCSAASLRDGVQSLLQTAGLGKLKPNTLVIGFKRNWMR 294

Query: 708 ASAEDLVAYFNVLHTAFENRLAVAIVRVRGGLD 740
           A   ++  Y N+++ AFE    VAI+RVR   D
Sbjct: 295 APHSEVEEYVNIINDAFELNYGVAILRVREEFD 327



 Score =  143 bits (347), Expect = 6e-34
 Identities = 79/186 (42%), Positives = 111/186 (59%), Gaps = 14/186 (7%)

Query: 850  FKRKQESGTVDVWWLYDDVGLTILLPYIISQRSAWGNCKLRIFXXXXXXXXXXXXXXXXX 909
            FK KQ+ GTVDVWWL+DD GLTIL+PY+++  S W  C+LRIF                 
Sbjct: 594  FKGKQK-GTVDVWWLFDDGGLTILIPYLLTLHSLWKGCRLRIF--TPGSSNIKNNEIRMA 650

Query: 910  XXXSKFRIDYSSLTMVQDITEPPQAETKALFDETIKKFTSDSAAPECRISETELTTLSGK 969
                KFRID+SS+ +V  I + P        +++++ F       E      E   L  +
Sbjct: 651  NLLKKFRIDFSSIEVVHGIDKAPS-------NKSVQDFRRLPIKEEL----DEGVQLDKR 699

Query: 970  TNRQLRLRELLLANSRDSRLIVMSLPMPRKGSVSAPLYMAWLEMMSRDLPPMLFVRGNHT 1029
              RQ+R+ ELL  +S+D+RLIVM+LP+P+   +S  +YM+WLE++S DLPP+  +RGN T
Sbjct: 700  ILRQIRIGELLRQHSKDARLIVMTLPVPKPTLMSPLMYMSWLEVLSADLPPVFLIRGNQT 759

Query: 1030 SVLTFY 1035
            SVLTFY
Sbjct: 760  SVLTFY 765


>SB_27714| Best HMM Match : AA_permease (HMM E-Value=0.29)
          Length = 420

 Score =  174 bits (423), Expect = 4e-43
 Identities = 94/219 (42%), Positives = 134/219 (61%), Gaps = 30/219 (13%)

Query: 158 VKGGGIYYIISRSLGPEFGASVGIIFAFANAVAASMNTIGFCDSMNHLLKSLDLQIIDNS 217
           V  GG YY+ISRSLGPEFG S+G+IF+ ANAVA ++  +GF +++  +L+     IID  
Sbjct: 202 VPTGGAYYLISRSLGPEFGGSIGLIFSLANAVAVALYVVGFAETVRDILRENGSLIIDE- 260

Query: 218 YNDVRIIGAIALFVMCVICAVGMDWES-------------------------KAQNFLIA 252
            ND+R+IG I++  +  +  +G++W S                         + Q  L+ 
Sbjct: 261 VNDIRVIGVISVLALLAVTLIGLEWVSSRIRTLNRRSRLFKLHYINLNRRDVRTQMVLLG 320

Query: 253 IIVGAIVDFVVGAVMGPKSNLEVAEGFVGLSTSTFVENFNSDFKYSEGMEQNFFSVFAIF 312
           I++ +IVD +VG+ +GP+  L VA+G VGL+  TF  N   D++  E    +FFSVFA+F
Sbjct: 321 ILLISIVDAIVGSFIGPQDKLSVAQGIVGLNAKTFTTNLLPDYRPGE----HFFSVFAVF 376

Query: 313 FPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSY 351
           FP+ TGI AG NISGDLKD   AIPKGTL A+L+S + Y
Sbjct: 377 FPAATGILAGVNISGDLKDAQKAIPKGTLWAILLSTLVY 415


>SB_57568| Best HMM Match : PqiA (HMM E-Value=0.3)
          Length = 266

 Score = 60.5 bits (140), Expect = 7e-09
 Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 30/159 (18%)

Query: 165 YIISRSLGPEFGASVGIIFAFANAVAASMNTIGFCDS-MNHLLKSLDLQIIDNSYND--V 221
           Y+ISR+LGPEFG ++GIIF FAN  A+++  +GF ++ +N+      L  I++ +     
Sbjct: 43  YMISRTLGPEFGGAIGIIFFFANVFASALYVLGFVEALLNNFGPRGSLAHIESFHQGYWY 102

Query: 222 RIIGAIALFVMCV-ICAVGMDWESKAQNFLIAIIVGAIVDFVVGAVMGPKSNLEVAEGFV 280
           + +   A+ ++C+ +C +G    +K  +F+I +           AVM             
Sbjct: 103 QFLYGSAILMLCLAVCMIGAGMFAKT-SFVIFL-----------AVM------------- 137

Query: 281 GLSTSTFVENFNSDFKYSEGMEQNFFSVFAIFFPSVTGI 319
            +S S  +  F  D+   E  EQ +  VFAI F  VTGI
Sbjct: 138 -VSVSAALPKFTKDYTKDEHSEQTWLQVFAILFNGVTGI 175


>SB_1945| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 919

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 10/72 (13%)

Query: 634 IIGDISKEKLSYKVCSARARADNEWLQERKVRAFCSLVHGFNFEQGARALIQATGVGKLA 693
           ++ DI+  K + KVC          ++E KV+ F  +V   N +QG   LIQ +G+G L 
Sbjct: 513 LVTDITSAKENLKVC----------MKEEKVKGFMKIVTSENVKQGISFLIQGSGLGGLD 562

Query: 694 PNVLLMGYKSDW 705
           PN +L+ +  +W
Sbjct: 563 PNTVLLAFPENW 574



 Score = 40.3 bits (90), Expect = 0.008
 Identities = 18/75 (24%), Positives = 32/75 (42%)

Query: 528 VWVSLAGFLMCVGIMLLISWIMSLVTIAIFFTLYLIVHYRNPDVNWGSSTQAQMYKTALS 587
           ++ S  G  +C+ +M + SW  +LV + I   +Y  + ++     WG   +      A  
Sbjct: 157 MFTSFLGVCLCLALMFISSWYYALVAMIIAAAVYKYIEFQGAKKEWGDGIRGLALSAARF 216

Query: 588 SAHNLARTGEHVKNY 602
           S   L     H KN+
Sbjct: 217 SLLRLEEGPPHTKNW 231


>SB_59346| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 684

 Score = 41.5 bits (93), Expect = 0.003
 Identities = 18/27 (66%), Positives = 22/27 (81%)

Query: 318 GIQAGANISGDLKDPASAIPKGTLLAL 344
           G+ +G N+SGDLKDP+S IP GTL AL
Sbjct: 148 GVLSGINMSGDLKDPSSNIPAGTLAAL 174



 Score = 31.9 bits (69), Expect = 2.8
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 456 FSKPYGRHGEAYRGYXXXXXXXXXXXXIAKLNAIAPLISNFYLASYALINFCTFHAAL 513
           ++K  G + E Y               I  LNA+AP+++  +L +YA I++  F  A+
Sbjct: 406 YNKRRGANKEPYVASIFVAVIAMLFILIGNLNALAPIVTMPFLVTYASIDYAYFKLAM 463


>SB_16238| Best HMM Match : Nucleos_tra2_C (HMM E-Value=0.71)
          Length = 304

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)

Query: 610 GGRAHARPPLVDLGSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKV----- 664
           G R   +   V LG+ +T      I GD+   +L  K+C  +A  DNE    R+V     
Sbjct: 129 GRRVDFKGKPVRLGTHMTPTAPASIGGDVQSFRLQ-KICDTQAVLDNEITHHRQVRKKYK 187

Query: 665 RAFCSLVHGFNFEQG-ARALIQATGVG 690
           RAF ++ H  +   G A   + + GVG
Sbjct: 188 RAF-AVTHAVSVASGIAAGALSSAGVG 213


>SB_29563| Best HMM Match : IncA (HMM E-Value=0.37)
          Length = 223

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 623 GSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKV-----RAFCSLVHGFNFE 677
           G+ +T A    I GD+   +L  K+C  +A  DNE    RKV     RAF +  H  +  
Sbjct: 23  GTHMTPAAPASIGGDVQSFRLQ-KICDTQAVLDNEITHHRKVRKKYKRAF-AFTHAVSVA 80

Query: 678 QG-ARALIQATGVG 690
            G A   + + GVG
Sbjct: 81  SGIAAGALSSAGVG 94


>SB_5731| Best HMM Match : OAR (HMM E-Value=2.8)
          Length = 194

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 623 GSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKV-----RAFCSLVHGFNFE 677
           G+ +T A    I GD+   +L  K+C  +A  DNE    RKV     RAF +  H  +  
Sbjct: 23  GTHMTPAAPASIGGDVQSFRLQ-KICDTQAVLDNEITHHRKVRKKYKRAF-AFTHAVSVA 80

Query: 678 QG-ARALIQATGVG 690
            G A   + + GVG
Sbjct: 81  SGIAAGALSSAGVG 94


>SB_8101| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 464

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 610 GGRAHARPPLVDLGSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKVR 665
           G R   +   V LG+ +T      I GD+   +L  K+C  +A  DNE    R+VR
Sbjct: 208 GRRVDFKGKPVRLGTHMTPTAPASIGGDVQSFRLQ-KICDTQAVLDNEMTHHRQVR 262


>SB_7380| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 408

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 606 LLVLGGRAHARPPLVDLGSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKV- 664
           LLV G      PP    G+ +T      I GD+   +L  K+C  +A  DNE    R+V 
Sbjct: 268 LLVGGAHLSVCPPK---GTHMTPTAPASIGGDVQSFRLQ-KICDTQAVLDNEITHHRQVR 323

Query: 665 ----RAFCSLVHGFNFEQG-ARALIQATGVG 690
               RAF ++ H  +   G A   + + GVG
Sbjct: 324 KKYKRAF-AVTHAVSVASGIAAGALSSAGVG 353


>SB_42509| Best HMM Match : DUF533 (HMM E-Value=0.14)
          Length = 773

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 610 GGRAHARPPLVDLGSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKV----- 664
           G R   +   V LG+ +T      I GD+   +L  K+C+ +A  DNE    R+V     
Sbjct: 522 GRRVDFKGKPVRLGTHMTPTAPASIGGDVQSFRLQ-KICNTQAVLDNEITHHRQVRKKYK 580

Query: 665 RAFCSLVHGFNFEQG-ARALIQATGVG 690
           RAF ++ H  +   G A   + + G+G
Sbjct: 581 RAF-AVTHAVSVASGIAAGALSSAGLG 606


>SB_4240| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 572

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 12/112 (10%)

Query: 251 IAIIVGAIVDFVVGAVMGPKSNLEVAEGFVGLSTSTFV----------ENFNSDFKYSE- 299
           +A+ +  ++  +V +     S L  A  FV LS   FV           N+++  K++  
Sbjct: 128 LAVFLAVLITIIVSSGTRQASILNKAVTFVNLSVVVFVICVGFYFADTSNWSTLEKFAPY 187

Query: 300 GMEQNFFSVFAIFFPSVTGIQAGANISGDLKDPASAIPKGTLLALLISMVSY 351
           G E    +  + FF  V G         + K+P  AIP   +L +L+S ++Y
Sbjct: 188 GYEGVIAAAGSCFFAFV-GFDVIGTAGEETKNPKKAIPLALMLTILVSFLAY 238


>SB_17284| Best HMM Match : IncA (HMM E-Value=0.24)
          Length = 416

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 623 GSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKVR 665
           G+ +T A    I GD+   ++  K+C  RA  DNE    R+VR
Sbjct: 211 GTHMTPAAPASISGDVQSFRIQ-KICDTRAVLDNEITHHRQVR 252


>SB_15314| Best HMM Match : DoxX (HMM E-Value=0.17)
          Length = 262

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 16/222 (7%)

Query: 129 GWSLVI-IALSAVVCVITT-LSMSAICTNGEVKGGGIYYIISRSLGPEFGASVGIIFAFA 186
           G+SLV  + L  ++  I   L  + + T    + GG++  +S +LGP +G +  I F + 
Sbjct: 39  GFSLVFFLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFA-AISFGYL 97

Query: 187 NAVAASMNTIGFCDSMNHLLKSLDLQIIDNSYNDVRIIGAIALFVMCVICAVGMDWESKA 246
                    IGF   +  +L +L   +   + N+  I   IA  +  ++ A+ +  +   
Sbjct: 98  QI------AIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALI--ILWALALT-QFGG 148

Query: 247 QNFLIAIIVGAIVDFVVGAVMGPKSNLEVAEGFVGLSTSTFVENFNSDFKYSEGMEQNFF 306
             +   I   A V F  G ++     + +A  ++       +E  +  F + +  +    
Sbjct: 149 TKYTARI---AKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTF-FPDFSKVGTL 204

Query: 307 SVFAIFFPSVTGIQAGANISGDLKDPASAIPKGTLLALLISM 348
            VF  F  S  G++A A    ++ +P    P   LL ++ ++
Sbjct: 205 VVFVAFILSYMGVEASATHVNEMSNPGRDYPLAMLLLMVAAI 246


>SB_18435| Best HMM Match : Beta_elim_lyase (HMM E-Value=7.1)
          Length = 275

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 610 GGRAHARPPLVDLGSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQE---RKVRA 666
           G R   +   V LG+ +T      I GD+   +L  K+C  +A  DNE       RK RA
Sbjct: 201 GRRVDFKGKPVRLGTHMTPTAPASIGGDVQSFRLQ-KICDTQAVLDNEITHHRLVRKKRA 259

Query: 667 FCSLVHGFNFEQGAR 681
           F ++ H  +   G R
Sbjct: 260 F-AVTHAVSVASGIR 273


>SB_27647| Best HMM Match : IncA (HMM E-Value=0.78)
          Length = 183

 Score = 30.7 bits (66), Expect = 6.4
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 8/63 (12%)

Query: 636 GDISKEKLSYKVCSARARADNEWLQERKV-----RAFCSLVHGFNFEQG-ARALIQATGV 689
           GD+   +L  K+C  +A  DNE    R+V     RAF ++ H  + E G A   + + GV
Sbjct: 30  GDVQSFRLQ-KICDTQAVLDNEITHHRQVRKKYKRAF-AVAHAVSLESGIAAGALSSAGV 87

Query: 690 GKL 692
           G L
Sbjct: 88  GVL 90


>SB_5590| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 227

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 623 GSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKVR 665
           G+ +T A S  I GD+   +L  K+C  +A  DNE    R+VR
Sbjct: 23  GTHMTPAVSASIGGDVQSFRLQ-KICDTQAVLDNEITHHRQVR 64


>SB_4044| Best HMM Match : IncA (HMM E-Value=0.44)
          Length = 222

 Score = 30.3 bits (65), Expect = 8.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 623 GSLITKAGSLMIIGDISKEKLSYKVCSARARADNEWLQERKVR 665
           G+ +T A    I GD+   +L  K+C  +A  DNE    R+VR
Sbjct: 23  GTHVTPAVPASIAGDVQSFRLQ-KICDTQAVLDNEITHHRQVR 64


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.323    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,473,458
Number of Sequences: 59808
Number of extensions: 1065976
Number of successful extensions: 2328
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2298
Number of HSP's gapped (non-prelim): 34
length of query: 1036
length of database: 16,821,457
effective HSP length: 89
effective length of query: 947
effective length of database: 11,498,545
effective search space: 10889122115
effective search space used: 10889122115
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 65 (30.3 bits)

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