GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001472-TA|BGIBMGA001472-PA|IPR004842|Na-K-Cl
cotransporter superfamily, IPR002443|Na-K-Cl co-transporter,
IPR004841|Amino acid permease-associated region
         (1036 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...   917   0.0  
AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione S-tran...    27   3.4  
AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450 pr...    26   4.4  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    26   5.9  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    25   7.7  

>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
            symporter protein.
          Length = 1127

 Score =  917 bits (2269), Expect = 0.0
 Identities = 475/1015 (46%), Positives = 628/1015 (61%), Gaps = 46/1015 (4%)

Query: 57   RRKRSLAQLTREALPRMENYRN--SKRALKRPSLGELHGDHLITEE-------------- 100
            R  RS    TREALPRM+NYRN  S +  +RP+L ELH   +  +E              
Sbjct: 124  RYARSFRHFTREALPRMDNYRNILSFQGNQRPTLDELHDASITNKETMRRGTVHEPAELD 183

Query: 101  ---------GVLIPCLLNIWGVMLFLRISWVVSQAGIGWSLVIIALSAVVCVITTLSMSA 151
                     GVL+ CLLNIWGVMLFLR+SWVV QAGI   +++I ++ VV  IT LSMSA
Sbjct: 184  GSIKFGWIKGVLMRCLLNIWGVMLFLRLSWVVGQAGIAQGVLLICMTTVVTTITALSMSA 243

Query: 152  ICTNGEVKGGGIYYIISRSLGPEFGASVGIIFAFANAVAASMNTIGFCDSMNHLLKSLDL 211
            I TNG +KGGG YY+ISRSLGPEFG S+G+IF+ ANAVA +M  +GFC+SM  LL S  +
Sbjct: 244  ISTNGVIKGGGTYYMISRSLGPEFGGSIGLIFSLANAVACAMYVVGFCESMIDLLASFGV 303

Query: 212  QIIDNSYNDVRIIGAIALFVMCVICAVGMDWESKAQNFLIAIIVGAIVDFVVGAVMGPKS 271
             I+D + NDVRIIG I + ++  I  VGM+WE+KAQ  L+ I++ AIVDF VG++ GPKS
Sbjct: 304  AIVDGAVNDVRIIGCITIVLLLCIVVVGMEWEAKAQIVLLIILLVAIVDFCVGSLWGPKS 363

Query: 272  NLEVAEGFVGLSTSTFVENFNSDFKYSEGMEQNFFSVFAIFFPSVTGIQAGANISGDLKD 331
             L+VA GFVG + +  +EN  S ++ S+G + +FFSVF+IFFP+ TGI AGANISGDLKD
Sbjct: 364  ELDVARGFVGYNATVLMENMQSAYRVSKGTQHDFFSVFSIFFPAATGILAGANISGDLKD 423

Query: 332  PASAIPKGTLLALLISMVSYAMMVLFTGAAALRDASGNITDLVISNGTVTNYSAVSQCAN 391
            P+S+IPKGT+LA+ I+  SY  M +  GA  LRDA+GN+TD+V  NGT  ++SA  + + 
Sbjct: 424  PSSSIPKGTILAIAITSASYIGMAVVAGATVLRDATGNVTDVV--NGT-WDFSACEETS- 479

Query: 392  STLFPCKYGMHVDFEIMQLMSAWGPFIYAGCWXXXXXXXXXXXXXVPRLIQALGVDRIYP 451
                 C YG+H  F++M+L+S +GP IYAGC+              P++ QAL  D++YP
Sbjct: 480  -----CAYGLHNSFQVMELVSVFGPLIYAGCFAATLSSALASLVSAPKVFQALCKDKLYP 534

Query: 452  GLIFFSKPYGRHGEAYRGYXXXXXXXXXXXXIAKLNAIAPLISNFYLASYALINFCTFHA 511
             + +F K +G++ E  RGY            +  LN IAPLISNF+LA+Y L+NF TFHA
Sbjct: 535  KISWFGKGFGKNNEPVRGYILTFVISVAVILVGDLNMIAPLISNFFLAAYCLVNFSTFHA 594

Query: 512  ALVRPLGWRPTFKYYNVWVSLAGFLMCVGIMLLISWIMSLVTIAIFFTLYLIVHYRNPDV 571
            +L +P+GWRPTFKYYN+W+SL G + C+ +M LISW  +L+T A   +LYLIV YR PDV
Sbjct: 595  SLAKPVGWRPTFKYYNMWLSLLGAIFCIAVMFLISWPTALITFAAVLSLYLIVSYRKPDV 654

Query: 572  NWGSSTQAQMYKTALSSAHNLARTGEHVKNYWPQLLVLGGRAHARPPLVDLGSLITKAGS 631
            NWGS+TQAQ YK AL S   L    EHVKNY PQ+LVL G   +RP LV+   L+TK  S
Sbjct: 655  NWGSTTQAQTYKNALLSVQQLNNVEEHVKNYRPQILVLCGHPSSRPLLVNFAYLLTKKLS 714

Query: 632  LMIIGDISKEKLSYKVCSARARADNEWLQERKVRAFCSLVHGFNFEQGARALIQATGVGK 691
            L++ G ++K  +S K  +   +   EW +  KV+ F SL+   +FE G+RA++QA+G+GK
Sbjct: 715  LLVCGHVTKTHVSQKYRNHLQKKAAEWFRRHKVKGFYSLIDDNDFETGSRAIMQASGIGK 774

Query: 692  LAPNVLLMGYKSDWTTASAEDLVAYFNVLHTAFENRLAVAIVRVRGGLDYX----XXXXX 747
            L PNVLLMG+K DW      +L  YFNV+H A +  L+VAI+RV  G DY          
Sbjct: 775  LRPNVLLMGFKGDWDRCEPAELEQYFNVVHKALDMYLSVAILRVGKGFDYSQVLGEDTVK 834

Query: 748  XXXXXSLTVTSSGSGELHVRRSDALIMHADSDLDIHTDSSAKNNLSNILTLSTSRSFTIT 807
                   T+ ++ S    +  +    +H   D      S A +      T+S +      
Sbjct: 835  FISEYPRTLVANDSTNDLLSHNKVSSLHGSCDSLSRNVSQASSTSDLSKTISVAPDPIDI 894

Query: 808  XXXXXXXXXXXXXRPTDMHRQIIYNAANGIELSKDQLTQMSIFKRKQESGTVDVWWLYDD 867
                         +  D    ++Y    G EL  + L +++ F  K+++G +DV+WLYDD
Sbjct: 895  NAKLITETGQRSLKRGD--PSLLYRGPGGAELPTEVLEELTQFTSKKKTGIIDVYWLYDD 952

Query: 868  VGLTILLPYIISQRSAWGNCKLRIFXXXXXXXXXXXXXXXXXXXXSKFRIDYSSLTMVQD 927
             GLT+LLPYIIS R  W +CKLR+F                    +KFRIDYS L ++ D
Sbjct: 953  GGLTLLLPYIISTRRNWASCKLRVFALANRKTELEFEQRNMASLLAKFRIDYSDLQLLPD 1012

Query: 928  ITEPPQAETKALFDETIKKFTSD------SAAPECRISETELTTLSGKTNRQLRLRELLL 981
            +T+ P  E    F   IK+FT+       S A    IS+ EL  +  KTNR L LRE LL
Sbjct: 1013 VTKKPNQEMADFFKGLIKEFTAKDDAADASTAGTSTISKAELLAVQDKTNRHLNLREYLL 1072

Query: 982  ANSRDSRLIVMSLPMPRKGSVSAPLYMAWLEMMSRDLPPMLFVRGNHTSVLTFYS 1036
             +S  S L+VM+LPMPRKG VSAPLYMAWLE +SRDLPP LFVRGN TSVLTFYS
Sbjct: 1073 QHSSKSDLVVMTLPMPRKGVVSAPLYMAWLEALSRDLPPFLFVRGNQTSVLTFYS 1127


>AF316636-1|AAG45164.1|  221|Anopheles gambiae glutathione
           S-transferase E2 protein.
          Length = 221

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 4/40 (10%)

Query: 595 TGEHVKNYWPQLLVLGGRAHARPPLVDLGSLITKAGSLMI 634
           TG+H+K   P+ + L  + H  P L D G++IT++ ++MI
Sbjct: 38  TGDHLK---PEFVKLNPQ-HTIPVLDDNGTIITESHAIMI 73


>AY748839-1|AAV28187.1|  169|Anopheles gambiae cytochrome P450
           protein.
          Length = 169

 Score = 26.2 bits (55), Expect = 4.4
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 822 PT-DMHRQIIYNAANGIELSK-DQLTQMSIFKRKQESGTVDVWWLYDDVGLTILLPYIIS 879
           PT D   Q+ Y  A   E  + D L    I  R QE  T+  + L  D  + I L  I +
Sbjct: 43  PTLDDRTQLAYTEATLREAMRIDTLVPSGIAHRVQEDTTLRGYDLPKDTLVLIGLDAIHN 102

Query: 880 QRSAWGN 886
           QR  WG+
Sbjct: 103 QREYWGD 109


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 8/86 (9%)

Query: 198 FCDSMNHLLKSLDLQIIDNSYNDVRIIGAIALFVMCVICAVGMDWESKAQNFLIAIIVGA 257
           F D   H      L+I+D +Y    ++  I  FV C  C VG    +   N  +A  +  
Sbjct: 11  FYDEYTHKTPK-KLKIVD-AYLLYILLTGIMQFVYC--CLVG----TFPFNSFLAGFIST 62

Query: 258 IVDFVVGAVMGPKSNLEVAEGFVGLS 283
           +  FV+G  +  +SN +  E F G+S
Sbjct: 63  VSCFVLGVCLRLQSNPQNKEQFFGIS 88


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 13/99 (13%)

Query: 535 FLMCVGIMLLISWIMSLV---TIAIFFTLYLIVHYRNPDVNWGSSTQAQMYKTALSSAHN 591
           FLM V I  +I W+MS        +    +  V Y + D+ +G     Q     +S+ +N
Sbjct: 140 FLMFVAIFTIIMWVMSPAFDNERRLPVPAWFPVDYHHSDIVYGVLFLYQTIGIVMSATYN 199

Query: 592 LARTGEHVKNYWPQLLVLGGRAHARPPLVDLGSLITKAG 630
            +             +  G   H    +V LGS++ K G
Sbjct: 200 FS----------TDTMFSGLMLHINGQIVRLGSMVKKLG 228


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 923,252
Number of Sequences: 2123
Number of extensions: 32211
Number of successful extensions: 53
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 7
length of query: 1036
length of database: 516,269
effective HSP length: 71
effective length of query: 965
effective length of database: 365,536
effective search space: 352742240
effective search space used: 352742240
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 53 (25.4 bits)