GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001472-TA|BGIBMGA001472-PA|IPR004842|Na-K-Cl
cotransporter superfamily, IPR002443|Na-K-Cl co-transporter,
IPR004841|Amino acid permease-associated region
         (1036 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    26   1.4  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   7.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    24   7.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   9.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   9.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   9.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   9.7  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 237 AVGMDWESKAQNFLIAIIVGAIVDFVV 263
           A+G+D+  +  N  + II GAIV  VV
Sbjct: 517 AMGLDYVGEDDNMQVRIIAGAIVAVVV 543


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 8/24 (33%), Positives = 16/24 (66%), Gaps = 1/24 (4%)

Query: 150 SAICTNGEVKGGGIYYIISRSLGP 173
           +A+C   E+K G +Y ++ ++ GP
Sbjct: 36  NAVCALNELKSGAVYKVVDQT-GP 58


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 33  SSLETVERGVTNAQPDTWLHDAGWRRKRSLAQLT 66
           SSL   E  V   QP      +GWR+ R++   T
Sbjct: 430 SSLSGDESDVVELQPVKSSKSSGWRKLRNIVHWT 463


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 7/85 (8%)

Query: 917 IDYSSLTMVQDITEPPQAETKALFDETIKKFTSD----SAAPECRISETELTTLSGKTNR 972
           +  S++T    +TEP +   + L D T+ K  +     S + E   ++  L T   + N 
Sbjct: 418 VQISNMTEYNGLTEPKKDNKRKLSDSTMNKINNHEYKRSVSRESNSNQFILMTTVNEGNN 477

Query: 973 QLR---LRELLLANSRDSRLIVMSL 994
            +    + E LL   +  R + + +
Sbjct: 478 NMAATYMNECLLNIQKSPRTLTLGI 502


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 32  RSSLETVERGVTNAQPDTWLHDAGWRRKRSLAQ-LTREA 69
           R  LE   R    +QP  WL   GW R+  L + L  EA
Sbjct: 210 RGILEAARRS-NLSQPFQWLASDGWGRQIKLVEGLEEEA 247


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 14/46 (30%), Positives = 19/46 (41%)

Query: 931 PPQAETKALFDETIKKFTSDSAAPECRISETELTTLSGKTNRQLRL 976
           PP  +T +L DE  K      A  +   +E E   +   T  QL L
Sbjct: 628 PPLYDTNSLMDEAYKPHKKFRALRQKDSAEAEPAVIVQHTQSQLHL 673


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 32  RSSLETVERGVTNAQPDTWLHDAGWRRKRSLAQ-LTREA 69
           R  LE   R    +QP  WL   GW R+  L + L  EA
Sbjct: 300 RGILEAARRS-NLSQPFQWLASDGWGRQIKLVEGLEEEA 337


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.323    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,092
Number of Sequences: 429
Number of extensions: 9468
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 8
length of query: 1036
length of database: 140,377
effective HSP length: 65
effective length of query: 971
effective length of database: 112,492
effective search space: 109229732
effective search space used: 109229732
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 48 (23.4 bits)