Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001469-TA|BGIBMGA001469-PA|IPR005055|Insect
pheromone-binding protein A10/OS-D
(106 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0064 + 25297268-25297612,25298150-25298237,25299608-252997... 29 0.55
01_05_0815 + 25458171-25458423,25458649-25458683 29 0.55
01_07_0359 - 43042675-43042758,43042956-43043024,43043099-430431... 29 0.73
08_02_0967 - 23110154-23110240,23110620-23110673,23111010-231111... 28 1.3
06_03_1186 - 28260487-28262112,28262205-28262345,28262429-282625... 27 3.0
08_01_0771 - 7464383-7464655,7464901-7464915,7465098-7465418 27 3.9
03_01_0269 + 2080338-2080508,2081086-2081335,2081432-2082648,208... 27 3.9
01_01_0905 + 7116121-7116236,7116285-7116339,7116948-7117005,711... 27 3.9
10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 25 9.0
05_05_0054 - 21936875-21937346,21937452-21937927 25 9.0
03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394 25 9.0
03_02_0277 + 7056341-7056391,7056681-7056764,7057107-7057223,705... 25 9.0
>05_06_0064 +
25297268-25297612,25298150-25298237,25299608-25299719,
25300417-25300972
Length = 366
Score = 29.5 bits (63), Expect = 0.55
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 37 RFIQRQLKCALGEAPC-DPIGKRLKTLAPLVLRGACPQ 73
R +Q ++C +G++ DP+ K + T +PL LR P+
Sbjct: 245 RRMQCNIQCPVGQSTASDPLKKLISTSSPLALRNKAPR 282
>01_05_0815 + 25458171-25458423,25458649-25458683
Length = 95
Score = 29.5 bits (63), Expect = 0.55
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 72 PQCSPQETKQIQKTLSYVQRNFPQHWAKLVRQYAG 106
PQ + ++ +Q ++ L+ R+ P+ W + R AG
Sbjct: 12 PQWTARQNEQFERALAVYDRDTPERWHNIARAVAG 46
>01_07_0359 -
43042675-43042758,43042956-43043024,43043099-43043159,
43043260-43043768,43044545-43045153,43045697-43045972,
43046581-43046769,43047006-43047116,43047621-43047908,
43047990-43048041,43048648-43048824,43049249-43049314,
43049675-43049929,43050071-43050577,43050807-43050886,
43050974-43051207
Length = 1188
Score = 29.1 bits (62), Expect = 0.73
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 40 QRQLKCALGEAPCDPIGKRLKTLAPLVLRGACPQCSPQETKQIQKTLSYVQRNFPQHWAK 99
Q L CA A C+P+G + + A A P + + + K+L+YV+ +H K
Sbjct: 115 QIDLFCANTIAKCEPLGTQRSSSASPHSSVAAPPITNFASPSLVKSLNYVRSLVARHIPK 174
Query: 100 LVRQYAG 106
L Q G
Sbjct: 175 LSFQPIG 181
>08_02_0967 -
23110154-23110240,23110620-23110673,23111010-23111177,
23111432-23111534,23111664-23111988,23112091-23112181
Length = 275
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 59 LKTLAPLVLRGACPQCSPQETKQIQKTLSYVQ--RNFPQHWAKLVRQYA 105
L A L+L A P QE ++ +Y+ P+HW KL ++A
Sbjct: 9 LLAAASLLLATAVPAARAQEETDHEEEFTYISGDEKGPEHWGKLKPEWA 57
>06_03_1186 -
28260487-28262112,28262205-28262345,28262429-28262573,
28262964-28263067,28263324-28263456,28263904-28264013,
28265144-28265167
Length = 760
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 7/43 (16%)
Query: 52 CDPIGKRLKTLAPLVLRGACPQCSPQETKQIQKTLSYVQRNFP 94
C+ IGK+L +L +G CPQ ET++ TL + FP
Sbjct: 110 CEYIGKQLNSLQK---QGDCPQ----ETREAVSTLIFAAARFP 145
>08_01_0771 - 7464383-7464655,7464901-7464915,7465098-7465418
Length = 202
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 48 GEAPCDPIGKRLKTLAPLVLRGACPQCSPQETKQIQKTL 86
G CD IG + + P+ + C+P++ K + + L
Sbjct: 15 GHRECDEIGNQSRGAPPMEACSSAGACAPRQAKAVGEAL 53
>03_01_0269 +
2080338-2080508,2081086-2081335,2081432-2082648,
2082933-2083083,2083247-2083563
Length = 701
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 55 IGKRLKTLAPLVLRGACPQCSPQETKQIQKTLSYVQRN 92
IG+ K A L+L C CSP Q+ S+V RN
Sbjct: 214 IGRIQKEFAVLLLYSGCETCSPNLLSQLDG--SFVPRN 249
>01_01_0905 +
7116121-7116236,7116285-7116339,7116948-7117005,
7117637-7117731,7117823-7117926,7118310-7118438,
7118845-7120633,7120849-7121054,7121865-7121949,
7122183-7122422
Length = 958
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 31 EALNDKRFIQRQLKCALGEAPCD-PIGKRLKTLAPLVLRGACP 72
E+L D R + ++ K A+ + D +GKRLK L +V+R P
Sbjct: 2 ESLLDLRRLLKKEKSAMNQKGDDLSMGKRLKALLTIVMRTTGP 44
>10_08_0731 +
20161962-20163628,20163721-20163862,20164181-20164490,
20164566-20166466,20166557-20166650,20166953-20167440,
20167919-20168599,20168870-20168944,20170148-20170210,
20170588-20170633,20171373-20171420,20171484-20171557
Length = 1862
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 24 VTDTALDEALNDKRFIQRQLKCALGEA 50
+ D + EA+ DK+ + +Q C L EA
Sbjct: 642 IQDCIVTEAVQDKKAVVKQTDCVLTEA 668
>05_05_0054 - 21936875-21937346,21937452-21937927
Length = 315
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 68 RGACPQCSPQETKQIQKTLSYVQRNFPQHWAKL 100
RG S +E K ++ L+ + RN P+ W ++
Sbjct: 34 RGGGGAWSQEENKVFEQALAALDRNDPERWERV 66
>03_05_0598 + 26006027-26006746,26007992-26008094,26008847-26012394
Length = 1456
Score = 25.4 bits (53), Expect = 9.0
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 72 PQCSPQETKQIQKTLSYVQRNF--PQHWAKLVRQ 103
P+ P E + + NF PQHW K VRQ
Sbjct: 533 PELLPVELDEYTPFWTVKCENFSDPQHWVKFVRQ 566
>03_02_0277 +
7056341-7056391,7056681-7056764,7057107-7057223,
7057335-7057772,7057889-7058295,7058371-7058470,
7058707-7058793,7059056-7059544
Length = 590
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 29 LDEALNDKRFIQRQLKCALGEAPC 52
L++ LND+ ++R L+ ALG PC
Sbjct: 49 LEKRLNDQFAMRRALEKALGYKPC 72
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.133 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,537,613
Number of Sequences: 37544
Number of extensions: 83240
Number of successful extensions: 179
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 173
Number of HSP's gapped (non-prelim): 12
length of query: 106
length of database: 14,793,348
effective HSP length: 72
effective length of query: 34
effective length of database: 12,090,180
effective search space: 411066120
effective search space used: 411066120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -