GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001469-TA|BGIBMGA001469-PA|IPR005055|Insect
pheromone-binding protein A10/OS-D
         (106 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)                       28   1.8  
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.3  

>SB_44732| Best HMM Match : TSP_1 (HMM E-Value=0)
          Length = 675

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 24  VTDTALDEALNDKRFIQRQLKCALGEAPCDPIG 56
           VT +  D+  N K   QRQ KC LG  P   +G
Sbjct: 539 VTCSTRDDRCNAKSMPQRQRKCNLGACPVWRVG 571


>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 476

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 4/65 (6%)

Query: 22  PQVTDTALDEALNDKRFIQRQLKCALGEAPCDPIGKRLKTLAPLVLRGACPQCSPQETKQ 81
           P V    +D+A  D  ++    +  +GEAP  P        AP       P  +P   K 
Sbjct: 278 PPVPTLPVDKAKMDSEYLSLMAELGVGEAPPPPAASEPAAFAP----APPPSQAPPPPKT 333

Query: 82  IQKTL 86
           I  TL
Sbjct: 334 IPSTL 338


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.321    0.133    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,997,532
Number of Sequences: 59808
Number of extensions: 103002
Number of successful extensions: 197
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 194
Number of HSP's gapped (non-prelim): 3
length of query: 106
length of database: 16,821,457
effective HSP length: 72
effective length of query: 34
effective length of database: 12,515,281
effective search space: 425519554
effective search space used: 425519554
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)