GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001469-TA|BGIBMGA001469-PA|IPR005055|Insect
pheromone-binding protein A10/OS-D
         (106 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g67280.1 68418.m08483 leucine-rich repeat transmembrane prote...    25   7.7  
At5g65800.1 68418.m08279 1-aminocyclopropane-1-carboxylate synth...    25   7.7  
At3g49700.1 68416.m05434 1-aminocyclopropane-1-carboxylate synth...    25   7.7  

>At5g67280.1 68418.m08483 leucine-rich repeat transmembrane protein
           kinase, putative
          Length = 751

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 40  QRQLKCALGEAPCDPIGKRLKTLAPLVLRGACPQCSPQETKQIQKTLSYVQRNFPQH 96
           +R ++ A      +  GK    LA L +  AC    PQ    I++ L  ++R FP H
Sbjct: 692 ERAIRMADSAIRAELEGKEEAVLACLKMGLACASPIPQRRPNIKEALQVLER-FPVH 747


>At5g65800.1 68418.m08279 1-aminocyclopropane-1-carboxylate
           synthase, putative / ACC synthase, putative similar to
           ACC synthases from Arabidopsis thaliana [GI:940370],
           Lycopersicon esculentum [GI:508609], Cucumis sativus
           [GI:3641649]
          Length = 470

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 17  AQQNRPQVTDTALDEALNDKRFIQRQLKCALGEAPCDPIGKRL 59
           +  N  Q+T++AL +A    + +  ++K  L   P +P+G  L
Sbjct: 166 SSSNGFQITESALQQAYQQAQKLDLKVKGVLVTNPSNPLGTAL 208


>At3g49700.1 68416.m05434 1-aminocyclopropane-1-carboxylate
           synthase, putative / ACC synthase, putative similar to
           ACC synthases from Arabidopsis thaliana [GI:940370],
           Lycopersicon esculentum [GI:508609], Cucumis sativus
           [GI:3641649]
          Length = 470

 Score = 25.4 bits (53), Expect = 7.7
 Identities = 12/43 (27%), Positives = 23/43 (53%)

Query: 17  AQQNRPQVTDTALDEALNDKRFIQRQLKCALGEAPCDPIGKRL 59
           +  N  Q+T++AL +A    + +  ++K  L   P +P+G  L
Sbjct: 166 SSSNGFQITESALQQAYQQAQKLDLKVKGVLVTNPSNPLGTML 208


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.321    0.133    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,027,561
Number of Sequences: 28952
Number of extensions: 65587
Number of successful extensions: 155
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 153
Number of HSP's gapped (non-prelim): 3
length of query: 106
length of database: 12,070,560
effective HSP length: 71
effective length of query: 35
effective length of database: 10,014,968
effective search space: 350523880
effective search space used: 350523880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)