BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001468-TA|BGIBMGA001468-PA|IPR001965|Zinc finger, PHD-type, IPR011011|Zinc finger, FYVE/PHD-type (487 letters) Database: tribolium 317 sequences; 114,650 total letters Searching....................................................done Score E Sequences producing significant alignments: (bits) Value AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 1.2 U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 24 2.8 AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 24 2.8 AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 23 4.8 AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 23 4.8 AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 4.8 AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 6.4 >AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger protein protein. Length = 456 Score = 25.0 bits (52), Expect = 1.2 Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 24 KPPMDTPTPQASAPSNPKKRRKTSN 48 K P P+P ++ S P +R TSN Sbjct: 69 KSPQGAPSPSSTPSSLPTQRTSTSN 93 >U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor Deformed protein. Length = 412 Score = 23.8 bits (49), Expect = 2.8 Identities = 12/28 (42%), Positives = 13/28 (46%) Query: 273 MGPNNSIMSSNPMQNSVMGPGHCGPMRH 300 +G N MS Q S MG H PM H Sbjct: 342 LGENMMDMSLTRHQISSMGHSHAHPMHH 369 >AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. Length = 412 Score = 23.8 bits (49), Expect = 2.8 Identities = 12/28 (42%), Positives = 13/28 (46%) Query: 273 MGPNNSIMSSNPMQNSVMGPGHCGPMRH 300 +G N MS Q S MG H PM H Sbjct: 342 LGENMMDMSLTRHQISSMGHSHAHPMHH 369 >AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. Length = 209 Score = 23.0 bits (47), Expect = 4.8 Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 275 PNNSIMSSNPMQNSVMGPGHCGPM 298 P++S+ P+ + V PG GP+ Sbjct: 75 PSSSLSYGGPVNDDVRSPGTPGPL 98 >AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. Length = 456 Score = 23.0 bits (47), Expect = 4.8 Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 275 PNNSIMSSNPMQNSVMGPGHCGPM 298 P++S+ P+ + V PG GP+ Sbjct: 231 PSSSLSYGGPVNDDVRSPGTPGPL 254 >AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription factor protein. Length = 441 Score = 23.0 bits (47), Expect = 4.8 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 1/22 (4%) Query: 395 VSAGKV-YPPDQPMVFNPQNPN 415 V GK PP P+ +P++PN Sbjct: 96 VPGGKAEVPPSNPIYIHPESPN 117 >AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein protein. Length = 1156 Score = 22.6 bits (46), Expect = 6.4 Identities = 9/36 (25%), Positives = 18/36 (50%) Query: 15 GPGLGPPDFKPPMDTPTPQASAPSNPKKRRKTSNAS 50 G + P + + P PQ ++PSN ++N++ Sbjct: 404 GVNVPVPPMQSQIINPQPQITSPSNTNTSTSSTNSN 439 Database: tribolium Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 114,650 Number of sequences in database: 317 Lambda K H 0.315 0.134 0.442 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 70,081 Number of Sequences: 317 Number of extensions: 2566 Number of successful extensions: 14 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 7 Number of HSP's gapped (non-prelim): 7 length of query: 487 length of database: 114,650 effective HSP length: 59 effective length of query: 428 effective length of database: 95,947 effective search space: 41065316 effective search space used: 41065316 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 45 (22.2 bits)
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