Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001468-TA|BGIBMGA001468-PA|IPR001965|Zinc finger,
PHD-type, IPR011011|Zinc finger, FYVE/PHD-type
(487 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 37 0.028
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 34 0.20
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 31 1.8
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 31 1.8
AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical ... 31 1.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 31 2.4
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 31 2.4
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 31 2.4
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 30 3.2
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 30 3.2
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 30 3.2
AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 3.2
Z68105-2|CAA92118.1| 270|Caenorhabditis elegans Hypothetical pr... 30 4.2
AF022978-2|AAG24183.1| 440|Caenorhabditis elegans Nuclear hormo... 30 4.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 29 9.7
Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 29 9.7
AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 29 9.7
AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical ... 29 9.7
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
ZK593.4 protein.
Length = 1477
Score = 37.1 bits (82), Expect = 0.028
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 425 CHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLSSKNIP 481
C K D+ ++CE+GC WFH C G F L E+ C CL + P
Sbjct: 1419 CLKPYGDSVNWVMCEAGCKNWFHVICLG-----FTLREINDMHEYRCSSCLDHADSP 1470
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 422 CGVCHKEVHDNDQAILCE-SGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLSSKN 479
C C+ E D D +LC+ GCN H C +P +L EW C KC+ S++
Sbjct: 322 CVACN-EGKDEDLLLLCDIDGCNNGRHTYCC---DP---VLDEVPEGEWRCPKCIESED 373
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 34.3 bits (75), Expect = 0.20
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 422 CGVCHKEVHDNDQAILC-ESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLS 476
C CH + + C C +HR CT +S A + WVC C S
Sbjct: 860 CAGCHHFIMPGSSTLSCLYHDCKNVYHRECTRISPSAATQMEGTPQVRWVCPSCES 915
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 31.1 bits (67), Expect = 1.8
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 9 PSYRLPGPGLGPPDFKPPMDTPTPQASAP 37
P++ PGP +GPP PPM P AP
Sbjct: 227 PTFAHPGPSMGPP-MGPPMGPPMGHPQAP 254
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 417 PPIYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKC 474
P +Y C VC K D + C+S C WFH C G + AE A++ C C
Sbjct: 177 PALY-C-VCQKPYDDTKFYVGCDS-CQGWFHPECVGTTR-----AEAEQAADYNCPAC 226
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 425 CHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLSSK 478
C K + I CE C W+H C G++E +L E W C++C+ +
Sbjct: 123 CQKIFDASKLYIQCEL-CARWYHGDCVGVAEQT--ILGLE---HWSCEECIEEQ 170
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 417 PPIYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKC 474
P +Y C VC K D + C+S C WFH C G + AE A++ C C
Sbjct: 2030 PALY-C-VCQKPYDDTKFYVGCDS-CQGWFHPECVGTTR-----AEAEQAADYNCPAC 2079
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 425 CHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLSSK 478
C K + I CE C W+H C G++E +L E W C++C+ +
Sbjct: 1976 CQKIFDASKLYIQCEL-CARWYHGDCVGVAEQT--ILGLE---HWSCEECIEEQ 2023
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 417 PPIYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKC 474
P +Y C VC K D + C+S C WFH C G + AE A++ C C
Sbjct: 456 PALY-C-VCQKPYDDTKFYVGCDS-CQGWFHPECVGTTR-----AEAEQAADYNCPAC 505
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 425 CHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLSSK 478
C K + I CE C W+H C G++E +L E W C++C+ +
Sbjct: 402 CQKIFDASKLYIQCEL-CARWYHGDCVGVAEQT--ILGLE---HWSCEECIEEQ 449
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 417 PPIYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKC 474
P +Y C VC K D + C+S C WFH C G + AE A++ C C
Sbjct: 274 PALY-C-VCQKPYDDTKFYVGCDS-CQGWFHPECVGTTR-----AEAEQAADYNCPAC 323
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 425 CHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLSSK 478
C K + I CE C W+H C G++E +L E W C++C+ +
Sbjct: 220 CQKIFDASKLYIQCEL-CARWYHGDCVGVAEQT--ILGLE---HWSCEECIEEQ 267
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 417 PPIYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKC 474
P +Y C VC K D + C+S C WFH C G + AE A++ C C
Sbjct: 169 PALY-C-VCQKPYDDTKFYVGCDS-CQGWFHPECVGTTR-----AEAEQAADYNCPAC 218
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 425 CHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCLSSK 478
C K + I CE C W+H C G++E +L E W C++C+ +
Sbjct: 115 CQKIFDASKLYIQCEL-CARWYHGDCVGVAEQT--ILGLE---HWSCEECIEEQ 162
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 7 GMPSYRLPGPGLGPPDFKPPMDTPTPQASAPSNP 40
G P+ G G PP F P+ P A+APS P
Sbjct: 938 GRPAAPAFGIGRAPPGFSEPLGPTLPPAAAPSKP 971
>AF022982-8|AAB69934.1| 234|Caenorhabditis elegans Hypothetical
protein T23B12.1 protein.
Length = 234
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 421 PCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTA-EVYAEWVCDKCLSSKN 479
PC VCH +Q + C C +H C S P + A E ++ C CL SK
Sbjct: 149 PCAVCHGVSLAGNQVLACRR-CRDCYHMAC---SIPTVSIEEASEPSFKYYCKTCLVSKK 204
Query: 480 I 480
+
Sbjct: 205 V 205
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 8 MPSYR-LPGPGLGPPDF-KPPMDTPTPQASAP 37
MP + +P PG+GPP F PP+ P P P
Sbjct: 76 MPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 107
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 8 MPSYR-LPGPGLGPPDF-KPPMDTPTPQASAP 37
MP + +P PG+GPP F PP+ P P P
Sbjct: 99 MPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 130
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 8 MPSYR-LPGPGLGPPDF-KPPMDTPTPQASAP 37
MP + +P PG+GPP F PP+ P P P
Sbjct: 349 MPHHMGMPPPGMGPPPFMPPPIGMPPPPLGMP 380
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 30.3 bits (65), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 9 PSYRLPGPGLGPPDFKPPMDTPTPQAS 35
P+ P PG+ + PP+ TPTP A+
Sbjct: 60 PALPAPHPGIPSSSYHPPVSTPTPTAA 86
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 426 HKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCL 475
H ++ Q I C+S C W+H C+GL + + L Y ++ C KC+
Sbjct: 232 HHHKKNDFQWIGCDS-CQTWYHFLCSGLEQFEYYL-----YEKFFCPKCV 275
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 426 HKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAEVYAEWVCDKCL 475
H ++ Q I C+S C W+H C+GL + + L Y ++ C KC+
Sbjct: 245 HHHKKNDFQWIGCDS-CQTWYHFLCSGLEQFEYYL-----YEKFFCPKCV 288
>AL033536-5|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 14 PGPGLGPPDFKPPMD--TPTPQASAPSNP 40
PGPG GPP P D P+P +P+ P
Sbjct: 940 PGPGPGPPSPNGPSDPNKPSPNGPSPNGP 968
>Z68105-2|CAA92118.1| 270|Caenorhabditis elegans Hypothetical
protein F13E6.3 protein.
Length = 270
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 418 PIYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAF 458
P++PC VC+ + C+ GC+ W H C G+ F
Sbjct: 220 PLWPCAVCNASAKFG--SCKCK-GCDQWSHLTCVGIKMKDF 257
>AF022978-2|AAG24183.1| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 130 protein.
Length = 440
Score = 29.9 bits (64), Expect = 4.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 419 IYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTG 452
+Y C VC H N + C +F R CTG
Sbjct: 34 LYTCQVCALPAHGNHFGAISCRACAAFFRRACTG 67
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 9 PSYRLPG--PGLGPPDFKPPMDTPTPQASAPSNP 40
P R+P P PP +PPM P+PQ P P
Sbjct: 142 PPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP 175
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 262 GPMGPSCSNGSMG-PNNSIMSSNPMQNSVMGPGHCGP 297
GP GP +G+ G P N + +P S+ PG GP
Sbjct: 140 GPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGP 176
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 262 GPMGPSCSNGSMG-PNNSIMSSNPMQNSVMGPGHCGP 297
GP GP +G+ G P N + +P S+ PG GP
Sbjct: 140 GPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAGP 176
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.7 bits (61), Expect = 9.7
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 419 IYPCGVCHKEVHDNDQAILCESGCNFWFHRGCTGLSEPAFQLLTAE-VYAEWVCDKC 474
I+ C VC I C+ C WFH C G LTAE ++W C +C
Sbjct: 307 IWICPVCSVAYTVGANMIGCDQ-CQDWFHWHCVG--------LTAEPTDSKWFCTRC 354
>Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical
protein T01E8.2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 9 PSYRLPGPGLGPPDFKPPMDTP-TPQASAPSNPKKRRKT 46
PSY L P ++TP TP ++ SNPK RK+
Sbjct: 322 PSYSLDSPPPSSDTSSSSIETPSTPNENSNSNPKASRKS 360
>AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein.
Length = 367
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 9 PSYRLPGPGLGPPDFKPPMDTP-TPQASAPSNPKKRRKT 46
PSY L P ++TP TP ++ SNPK RK+
Sbjct: 322 PSYSLDSPPPSSDTSSSSIETPSTPNENSNSNPKASRKS 360
>AF016442-9|AAB65921.1| 714|Caenorhabditis elegans Hypothetical
protein K12B6.8 protein.
Length = 714
Score = 28.7 bits (61), Expect = 9.7
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 422 CGVCHKEVHDNDQ-AILCESGCNFWFHRGC 450
C +CH E+ ND+ AI CE C H C
Sbjct: 655 CAICHDEIMTNDKSAIKCER-CTKSIHEKC 683
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.134 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,312,449
Number of Sequences: 27539
Number of extensions: 255999
Number of successful extensions: 1464
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1434
Number of HSP's gapped (non-prelim): 47
length of query: 487
length of database: 12,573,161
effective HSP length: 84
effective length of query: 403
effective length of database: 10,259,885
effective search space: 4134733655
effective search space used: 4134733655
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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