GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001466-TA|BGIBMGA001466-PA|undefined
         (657 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   2.2  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    24   2.9  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   8.8  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 249 KQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFN 308
           K+  + + + I+Q  +S   SV N N S K    QH   +    +  +DKN         
Sbjct: 234 KRFKDEKKELIRQTHKSPSHSVDNSNSSEKKSSIQH--GDDAHKTHHLDKNPENTLGTML 291

Query: 309 KVNILSKTPVKQLEI 323
            ++  SK  V+Q+ +
Sbjct: 292 SIH-PSKLDVEQMNL 305


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 468  DDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHT 504
            D+NK  C+     T    +N+NV  + +  +  QS T
Sbjct: 1314 DNNKNICDWPEKATCDGTSNVNVVDIVTTAKPAQSTT 1350


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query: 579 FSQYEGISYIPASIQNRDRLFEELHWIAKTTAAD 612
           ++  + + Y+   I+   RL+  +H+I++T   D
Sbjct: 39  YNDLQNLKYLERCIKETLRLYPSVHFISRTLGQD 72


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/35 (20%), Positives = 20/35 (57%)

Query: 579 FSQYEGISYIPASIQNRDRLFEELHWIAKTTAADY 613
           ++  + + Y+  +I+   RL+  +H+I++    D+
Sbjct: 56  YNNLQEMKYLERAIKESLRLYPSVHFISRKLGEDF 90


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.311    0.126    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,459
Number of Sequences: 317
Number of extensions: 4906
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 5
length of query: 657
length of database: 114,650
effective HSP length: 61
effective length of query: 596
effective length of database: 95,313
effective search space: 56806548
effective search space used: 56806548
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)