GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001466-TA|BGIBMGA001466-PA|undefined
         (657 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione S-tran...    27   2.1  
AY341217-1|AAR13781.1|  200|Anopheles gambiae SRPN10 protein.          25   4.8  
AY341216-1|AAR13780.1|  200|Anopheles gambiae SRPN10 protein.          25   4.8  
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    25   8.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   8.4  
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            25   8.4  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   8.4  

>AF513638-1|AAM53610.1|  210|Anopheles gambiae glutathione
           S-transferase D3 protein.
          Length = 210

 Score = 26.6 bits (56), Expect = 2.1
 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 4/105 (3%)

Query: 318 VKQLEISDTTEEKNDRSSKIMIEKS--TLTDVKDITYIKYPLVIIGVHLFTSANCVSNGD 375
           +K+  I D  E   D  +K+  + +  TL D   + +  Y +V   V ++   + +   D
Sbjct: 28  LKKTNIHDPVER--DALTKLNPQHTIPTLVDNGHVVWESYAIVTYLVEVYGKDDTLYPKD 85

Query: 376 PPKVTWINNDNYIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKK 420
           P   + +N   + D   + + I+ +  + VK  +  D+Q    KK
Sbjct: 86  PKVRSVVNQRLFFDIGTLYKQIIDIIHLVVKKEQPTDEQMEKLKK 130


>AY341217-1|AAR13781.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 25.4 bits (53), Expect = 4.8
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 343 TLTDVKDITYIKYPLVIIGVHLFTSANCVSNGDPPKVTWINNDNYIDEEKMQQ 395
           TL  V  +  +   +  I  HL T     ++ D PKVT  +N + +D + + Q
Sbjct: 8   TLRPVLAVLLLLAKVQSIEDHLSTQPEITNHLDRPKVTMADNSSSLDAQFVSQ 60


>AY341216-1|AAR13780.1|  200|Anopheles gambiae SRPN10 protein.
          Length = 200

 Score = 25.4 bits (53), Expect = 4.8
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 343 TLTDVKDITYIKYPLVIIGVHLFTSANCVSNGDPPKVTWINNDNYIDEEKMQQ 395
           TL  V  +  +   +  I  HL T     ++ D PKVT  +N + +D + + Q
Sbjct: 8   TLRPVLAVLLLLAKVQSIEDHLSTQPEITNHLDRPKVTMADNSSSLDAQFVSQ 60


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 470 NKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHTKDIA-VKEQSSNMEDWTAEINSKQA 528
           N+  CNG+T       +    A  E  ++ Q++H +  A V      +  + +E++++  
Sbjct: 48  NEKECNGSTKLAACVVSEHEQAYRELKQRCQEAHDERTAKVNAIYEKLPAYLSEVSARVN 107

Query: 529 LLIVLLVNKKETPNL 543
           +L V L  + + PNL
Sbjct: 108 VLQVSL--QHDLPNL 120


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)

Query: 430 KHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQSCRDDNKTSCN 475
           +HL   +PK T+ H        SI  F  ++SS    +   + SC+
Sbjct: 9   QHLFLDRPKTTVLHLRTYTSLQSIAFFSTRRSSAHCTQQTRQASCS 54


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 286 NSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISD 325
           N   + NSR VD  +AK Y   N++  +  +    + ++D
Sbjct: 137 NKADLANSRVVDYEEAKQYADDNRLLFMETSAKTAVNVND 176


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 8.4
 Identities = 11/40 (27%), Positives = 20/40 (50%)

Query: 406 KNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNP 445
           +N R  +K+   ++   AN+ S N   ++S  +    HNP
Sbjct: 319 QNRRMKNKKNSQRQSAQANSGSSNNSSSHSHSQAQPHHNP 358


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.311    0.126    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,868
Number of Sequences: 2123
Number of extensions: 21936
Number of successful extensions: 50
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 8
length of query: 657
length of database: 516,269
effective HSP length: 68
effective length of query: 589
effective length of database: 371,905
effective search space: 219052045
effective search space used: 219052045
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 51 (24.6 bits)