GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001466-TA|BGIBMGA001466-PA|undefined
         (657 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    23   6.0  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    23   6.0  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    23   6.0  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    23   6.0  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    23   6.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   6.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   7.9  

>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 260 KQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVK 319
           K+++  + +S K  ++S +   + + N N+    R+  K +++D  +  +    SK P  
Sbjct: 26  KEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERER----SKEPKI 81

Query: 320 QLEISDTTEEKNDRSSK 336
              +S+ T   N+ + K
Sbjct: 82  ISSLSNKTIHNNNNNYK 98


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 260 KQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVK 319
           K+++  + +S K  ++S +   + + N N+    R+  K +++D  +  +    SK P  
Sbjct: 26  KEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERER----SKEPKI 81

Query: 320 QLEISDTTEEKNDRSSK 336
              +S+ T   N+ + K
Sbjct: 82  ISSLSNKTIHNNNNNYK 98


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 260 KQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVK 319
           K+++  + +S K  ++S +   + + N N+    R+  K +++D  +  +    SK P  
Sbjct: 26  KEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERER----SKEPKI 81

Query: 320 QLEISDTTEEKNDRSSK 336
              +S+ T   N+ + K
Sbjct: 82  ISSLSNKTIHNNNNNYK 98


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 260 KQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVK 319
           K+++  + +S K  ++S +   + + N N+    R+  K +++D  +  +    SK P  
Sbjct: 26  KEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERER----SKEPKI 81

Query: 320 QLEISDTTEEKNDRSSK 336
              +S+ T   N+ + K
Sbjct: 82  ISSLSNKTIHNNNNNYK 98


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 16/77 (20%), Positives = 37/77 (48%), Gaps = 4/77 (5%)

Query: 260 KQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVK 319
           K+++  + +S K  ++S +   + + N N+    R+  K +++D  +  +    SK P  
Sbjct: 259 KEKLLEERTSRKRYSRSREREKKSYKNENSYRKYRETSKERSRDRKERER----SKEPKI 314

Query: 320 QLEISDTTEEKNDRSSK 336
              +S+ T   N+ + K
Sbjct: 315 ISSLSNKTIHNNNNNYK 331


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 570 EVIEREYIEFSQYEGISYIPA 590
           E +ER  ++  +YEGIS  P+
Sbjct: 301 EKLERNDLDLEKYEGISSTPS 321


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 461 SSVQSCRDDNKTSCNGTTCTTKSNANNINVAKLE-SNEQSQQSHTKDIAV 509
           S+  +C+ D K + +G+  T    AN  +  K E S+ + ++  TK +A+
Sbjct: 575 SASSTCKKDKKNAGSGSRFTI-YKANKASKKKREKSSAKKERKATKTLAI 623


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.126    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,391
Number of Sequences: 429
Number of extensions: 7344
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 7
length of query: 657
length of database: 140,377
effective HSP length: 62
effective length of query: 595
effective length of database: 113,779
effective search space: 67698505
effective search space used: 67698505
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 47 (23.0 bits)