Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001466-TA|BGIBMGA001466-PA|undefined
(657 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44430.1 68415.m05525 DNA-binding bromodomain-containing prot... 39 0.009
At1g63670.1 68414.m07205 expressed protein 38 0.028
At5g55300.1 68418.m06891 DNA topoisomerase I identical to Swiss-... 37 0.049
At2g46240.1 68415.m05750 IQ domain-containing protein / BAG doma... 35 0.15
At3g28770.1 68416.m03591 expressed protein 34 0.26
At2g22795.1 68415.m02704 expressed protein 34 0.26
At5g26910.1 68418.m03209 expressed protein 33 0.60
At4g24170.1 68417.m03468 kinesin motor family protein contains P... 33 0.60
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 33 0.79
At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative... 33 0.79
At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative... 33 0.79
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 32 1.0
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 32 1.4
At3g24880.1 68416.m03120 expressed protein 32 1.4
At3g24870.1 68416.m03119 expressed protein 32 1.4
At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal hydrolase-r... 32 1.4
At5g45850.1 68418.m05640 expressed protein contains Pfam profile... 31 1.8
At4g08430.1 68417.m01392 Ulp1 protease family protein similar to... 31 1.8
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 31 1.8
At5g62280.1 68418.m07819 expressed protein 31 2.4
At3g19210.1 68416.m02438 DNA repair protein RAD54, putative simi... 31 2.4
At5g45520.1 68418.m05591 hypothetical protein 31 3.2
At4g10890.1 68417.m01772 expressed protein 31 3.2
At3g55060.1 68416.m06115 expressed protein contains weak similar... 31 3.2
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 31 3.2
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 31 3.2
At5g41410.1 68418.m05031 homeodomain protein (BEL1) identical to... 30 4.2
At4g21350.1 68417.m03084 U-box domain-containing protein similar... 30 4.2
At4g18490.1 68417.m02742 hypothetical protein 30 4.2
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 30 5.6
At2g42830.2 68415.m05303 agamous-like MADS box protein AGL5 / fl... 30 5.6
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 30 5.6
At5g28235.1 68418.m03421 Ulp1 protease family protein contains P... 29 7.4
At5g09850.1 68418.m01139 transcription elongation factor-related... 29 7.4
At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-conta... 29 7.4
At1g40129.1 68414.m04766 hypothetical protein 29 7.4
At5g52280.1 68418.m06488 protein transport protein-related low s... 29 9.8
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 9.8
At3g26932.1 68416.m03370 double-stranded RNA-binding domain (DsR... 29 9.8
At2g42320.1 68415.m05238 nucleolar protein gar2-related contains... 29 9.8
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 29 9.8
At2g27950.1 68415.m03388 expressed protein 29 9.8
At1g02990.2 68414.m00269 expressed protein similar to mature-par... 29 9.8
At1g02990.1 68414.m00270 expressed protein similar to mature-par... 29 9.8
>At2g44430.1 68415.m05525 DNA-binding bromodomain-containing protein
contains Pfam domains, Pfam PF00439: Bromodomain and
PF00249: Myb-like DNA-binding domain
Length = 646
Score = 39.1 bits (87), Expect = 0.009
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 406 KNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQS 465
K G+ +KQK T+ K +++N + +K T K+T+ + + D L+ L K S +
Sbjct: 507 KTGKGRNKQKQTESKTNSSNDNSSKQDTGKTEKKTVSADKKKSVAD-FLKRLKKNSPQKE 565
Query: 466 CRDDNKTSCN 475
+D NK+ N
Sbjct: 566 AKDQNKSGGN 575
>At1g63670.1 68414.m07205 expressed protein
Length = 689
Score = 37.5 bits (83), Expect = 0.028
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 220 HDMCKSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKS 279
H+ C+ E K ++ ++L + ESKP++ + +I +KN+
Sbjct: 80 HEKCQCNDRIVEEERSCKPKTRRRSLSSDRELEKYESKPVQGLLEREIRRIKNLKDETCD 139
Query: 280 LIEQHINS--NTIEN--SRKVDKNQAKDYNKFNKVNILS-KTPVKQLEISDTTEEK-NDR 333
+ ++ S + IEN +++D +D K +++N+ + + I EEK DR
Sbjct: 140 VPDKQKQSSLSEIENDSDKQMDMKNGRDCKKSSEINLQACVNEAAETFICSKAEEKGKDR 199
Query: 334 SSKIMIEKSTLTDVKDI 350
S + M L+ K++
Sbjct: 200 SKQFMEALDILSSNKEL 216
>At5g55300.1 68418.m06891 DNA topoisomerase I identical to
Swiss-Prot:P30181 DNA topoisomerase I [Arabidopsis
thaliana]
Length = 916
Score = 36.7 bits (81), Expect = 0.049
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 22/219 (10%)
Query: 224 KSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQ 283
K S++ P KK+ QL+ E KP+ Q++ S+VKN
Sbjct: 167 KDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKN----------- 215
Query: 284 HINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDTTEEKNDRSSKIMI---- 339
+ + + R ++KN + D + K I S +P D+ +++ D ++++
Sbjct: 216 EVPNGKVLGKRPLEKNSSADQSSLKKAKI-SASPTSVKMKQDSVKKEIDDKGRVLVSPKM 274
Query: 340 ---EKSTLTDVKDITYIKYPLVIIGVHLFTSANCVSNGDPPKVTWINNDNYIDEEKMQQL 396
+ ST D D + I S+N ++ PK +N+ + + K + +
Sbjct: 275 KAKQLSTREDGTD-DDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNV 333
Query: 397 IVKMHSVAVKNGR--TMDKQKPTQKKKSANNTSENKHLT 433
+ KN + T D + T K S ++ K T
Sbjct: 334 VSPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWT 372
>At2g46240.1 68415.m05750 IQ domain-containing protein / BAG
domain-containing protein contains Pfam profiles
PF00612: IQ calmodulin-binding motif, PF02179: BAG
(Apoptosis regulator Bcl-2 protein) domain
Length = 1043
Score = 35.1 bits (77), Expect = 0.15
Identities = 58/284 (20%), Positives = 119/284 (41%), Gaps = 28/284 (9%)
Query: 255 ESKPIKQQIRSKIS-SVKNMNQSHKSLIEQH-INSNTIENSRKVDKNQAKDYNKFNKVNI 312
E + +K+Q+ K S +N H L E++ + S+T N KV + +++ +++
Sbjct: 679 EKEAVKEQVEIKSQPSDSPVNLEHSQLTEENKMVSDT--NLEKVLRLSPEEH----PMSV 732
Query: 313 LSKTPVKQLEISDTTEEKNDRSSKIMIEKSTLTD-VKDITYIKYPLVIIGVHLFTSANCV 371
L++T KQ E + TEE + + T+ + P I V N
Sbjct: 733 LNRTDEKQAESAAETEEGYGLFETLATDSKQATENAAAASSTTIPEKIGEVETVVPGNPP 792
Query: 372 S-NGDPPKVTWINNDNYIDEEKMQQLIVKMHSVA--VKNGRTMDKQKPTQKKKSANNTSE 428
S +G+ VT + + + E +++ I ++ + + D + ++ ++ N+SE
Sbjct: 793 SADGNGMTVTNVEENKAMVVESLEEPINELPQMVEETETNSIRDPENASEVSEAETNSSE 852
Query: 429 NKH-------LTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTT 481
N++ + +S+ + P+ D Q L + S R+ N T+ + T +
Sbjct: 853 NENRKGEDDIVLHSEKNVELSELPVGVI-DEETQPLSQDPSSSYTREGNMTAMDPKTASQ 911
Query: 482 K--------SNANNINVAKLESNEQSQQSHTKDIAVKEQSSNME 517
+ +N+ I E ++ +QS ++ VKEQ E
Sbjct: 912 EETEVDHSPNNSKGIGQQTSEPQDEKEQSPETEVIVKEQPLETE 955
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 34.3 bits (75), Expect = 0.26
Identities = 61/318 (19%), Positives = 123/318 (38%), Gaps = 36/318 (11%)
Query: 204 NREQQSNDHNNHQFNTH-DMCKSTSEESEPAIGKG---TKKVTKNYGQLKQLTEIESKPI 259
N ++ D N + + H + K S++ E + TK++ + Q ++ + E K
Sbjct: 1127 NSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSS 1186
Query: 260 KQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVK 319
K Q + K K M +S + ++++ + S + +K Q + + NK K K
Sbjct: 1187 KDQQKKK---EKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEKNKPKDDKKNTTK 1243
Query: 320 QLEISDTTEEKNDRSSKIMIEKSTLTDVKDITYIKYPLVIIGVHLFTSANCVSNGDPPKV 379
Q + E + ++ +KS T D K +++ S D
Sbjct: 1244 QSGGKKESMESESKEAENQ-QKSQATTQADSDESKNEILM---------QADSQADS--- 1290
Query: 380 TWINNDNYIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKE 439
++D+ D ++ + I+ D Q TQ+ + + N K KE
Sbjct: 1291 ---HSDSQADSDESKNEILMQ----------ADSQATTQRNNEEDRKKQTSVAENKKQKE 1337
Query: 440 TM--KHNPIRQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTTKSNANNINVAKLESNE 497
T K+ P +++ Q KK S++S + + T + + N ++++
Sbjct: 1338 TKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADS 1397
Query: 498 QSQQSHTKDIAVKEQSSN 515
Q+ SH+ A ++S N
Sbjct: 1398 QA-DSHSDSQADSDESKN 1414
Score = 33.5 bits (73), Expect = 0.45
Identities = 53/315 (16%), Positives = 136/315 (43%), Gaps = 15/315 (4%)
Query: 204 NREQQSNDHNNHQFNTHDMCKSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQI 263
+ ++++ N + + +ESE + K +K K Y + K T+ E+K K++
Sbjct: 976 DNKKETTKSENSKLKEENKDNKEKKESEDSASKNREK--KEYEEKKSKTKEEAKKEKKKS 1033
Query: 264 RSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEI 323
+ K K+ ++ KS E+ S ++ +K ++ + K ++ +K K K+ E
Sbjct: 1034 QDKKREEKD-SEERKSKKEKE-ESRDLKAKKKEEETKEKKESENHKSK--KKEDKKEHED 1089
Query: 324 SDTTEEKNDRSSKIMIEKSTLTDVKDITYIKYPLVIIGVHLFTSANCVSNGDPPKVTWIN 383
+ + +++ D+ K E+S ++ L + + V +
Sbjct: 1090 NKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNK-KKEDKNEKKKSQHVKLVK 1148
Query: 384 NDNYIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKKKSANN--TSENKHLTNSKPKETM 441
++ D+++ ++ K + +++ ++ + ++KKS+ + + K + S+ K+
Sbjct: 1149 KES--DKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLK 1206
Query: 442 KHNPIRQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTTKSNANNINV-AKLESNEQSQ 500
K+ R+ + S+ + K ++ ++ NK + T +S ++ ++ + E Q
Sbjct: 1207 KNEEDRKKQTSVEE---NKKQKETKKEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQ 1263
Query: 501 QSHTKDIAVKEQSSN 515
+S A ++S N
Sbjct: 1264 KSQATTQADSDESKN 1278
Score = 32.3 bits (70), Expect = 1.0
Identities = 64/321 (19%), Positives = 127/321 (39%), Gaps = 37/321 (11%)
Query: 207 QQSNDHNNHQFNTHDMCKSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSK 266
++ N + T++ EE+ K ++KV K G+ K+ + +K ++ + K
Sbjct: 751 KKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEK--GEKKESKD--AKSVETKDNKK 806
Query: 267 ISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDT 326
+SS +N +++ + E N E S+ +AK+ N+ V+ T V E D+
Sbjct: 807 LSSTENRDEAKERSGED--NKEDKEESKDYQSVEAKEKNENGGVD----TNVGNKE--DS 858
Query: 327 TEEKNDRSSKIMIEKSTLTDVKDITYIKYPLVIIGVHLFTSANCVSNGDPPKVTWINNDN 386
+ K+DRS ++ K K +V N+
Sbjct: 859 KDLKDDRSVEVKANKEESMKKKR----------------EEVQRNDKSSTKEVRDFANNM 902
Query: 387 YIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNPI 446
ID +K VK K G +K+ + K + N +S+ K K K+ K++ +
Sbjct: 903 DIDVQKGSGESVKYKKDEKKEG---NKE---ENKDTINTSSKQKGKDKKKKKKESKNSNM 956
Query: 447 RQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHTKD 506
++ + ++++ + Q +DNK + + N N K ES + + ++ K
Sbjct: 957 KKKEEDKKEYVNNELKKQ---EDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKK 1013
Query: 507 IAVKEQSSNMEDWTAEINSKQ 527
+++S E+ E Q
Sbjct: 1014 EYEEKKSKTKEEAKKEKKKSQ 1034
Score = 31.9 bits (69), Expect = 1.4
Identities = 63/333 (18%), Positives = 136/333 (40%), Gaps = 28/333 (8%)
Query: 203 HNREQQSNDH-NNHQFNTHDMCKSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQ 261
H +E++ NN + ++ ++ ++ E + T N L++ E K
Sbjct: 581 HTKEKREETQGNNGESVKNENLENKEDKKELKDDESVGAKTNNETSLEEKREQTQKGHDN 640
Query: 262 QIRSKISSVKNMNQSHKSLIEQHINSNTIENSR----------KVDKNQ-AKDYNKFNKV 310
I SKI K N E H+ +T +N+ +V KN + + + K
Sbjct: 641 SINSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKE 700
Query: 311 NILSKTPVKQLEISDT-TEEKNDRSSKIMIEKSTL--TDVKDITYIKYPLVIIGVHLFTS 367
N K+LE ++ T+ K+D+S E++ + + KD ++ G +
Sbjct: 701 NNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAK----GKKKESK 756
Query: 368 ANCVSNGDPPKVTWINNDNYIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKKKSANNTS 427
N + + +V +N +K + + K K+ ++++ K +K S N
Sbjct: 757 ENKKTKTNENRVR-NKEENVQGNKKESEKVEKGEKKESKDAKSVE-TKDNKKLSSTENRD 814
Query: 428 ENKHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQS---CRDDNKTSCNGTTCTTKSN 484
E K + KE + + + ++ + ++ V + ++D+K + + K+N
Sbjct: 815 EAKERSGEDNKEDKEES--KDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSVEVKAN 872
Query: 485 ANNINVAKLESNEQSQQSHTKDIAVKEQSSNME 517
K E +++ +S TK+ V++ ++NM+
Sbjct: 873 KEESMKKKREEVQRNDKSSTKE--VRDFANNMD 903
Score = 29.5 bits (63), Expect = 7.4
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 412 DKQKPTQKKKSANNTSENKHLTNSKPKETM--KHNPIRQFRDSILQFLHKKSSV--QSCR 467
D Q TQ+ + + N K KET K+ P +++ Q KK S+ +S
Sbjct: 1421 DSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKE 1480
Query: 468 DDNKTSCNGTTCTTKSNANNINVAKLES------NEQSQQSHTKDIAVKEQSSNMEDWTA 521
+N+ TT + N + + +S N Q +K+ + + S + T
Sbjct: 1481 AENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESKNEILMQADSQADSQTD 1540
Query: 522 EINSKQALLI 531
SK +L+
Sbjct: 1541 SDESKNEILM 1550
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 34.3 bits (75), Expect = 0.26
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 389 DEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKK-----KSANNTSENKHLTNSKPKETM-K 442
+E K ++ K + TMDK+ ++K + N E + + +S +ET K
Sbjct: 445 EESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEK 504
Query: 443 HNPIRQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQS 502
+ ++ +S Q K ++ DN+ S + K N I + S E+S+++
Sbjct: 505 EDETKEKEESSSQ--EKTEEKETETKDNEESSSQEETKDKEN-EKIEKEEASSQEESKEN 561
Query: 503 HTKDIAVKEQSSNMEDWTAEINSK 526
T + KE+SS+ E+ + N K
Sbjct: 562 ET-ETKEKEESSSQEETKEKENEK 584
Score = 33.9 bits (74), Expect = 0.34
Identities = 50/296 (16%), Positives = 124/296 (41%), Gaps = 12/296 (4%)
Query: 224 KSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQ 283
+S +++ E + + K + + K+ + + + + ++ +K + + ++ +
Sbjct: 432 ESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETE 491
Query: 284 HINSNTIENSR-KVDKNQAKDYNKFNKVNILSKTPVKQLEISDTTEEKNDRSSKIMIEKS 342
I S+ +E ++ K D+ + K+ + + +T K E S + EE D+ ++ IEK
Sbjct: 492 KIESSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENE-KIEKE 550
Query: 343 TLTDVKDITYIKYPLVIIGVHLFTSANCVSNGDPPKVTWINNDNYID-EEKMQQLIVKMH 401
+ ++ + +S + K+ + + +EK + I K
Sbjct: 551 EASSQEESK--ENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEE 608
Query: 402 SVAVKNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNPIRQFRDSILQFLHKKS 461
S + + + + + +++ S+N + EN + T S+ KE ++ N + D+ + S
Sbjct: 609 SASQEETKEKETETKEKEESSSNESQENVN-TESEKKEQVEENEKKTDEDT-----SESS 662
Query: 462 SVQSCRDDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHTKDIAVKEQSSNME 517
S D + T+ +SN N E ++ S ++ VK+ +++E
Sbjct: 663 KENSVSDTEQKQSEETSEKEESNKNGETEVTQEQSDSSSDTNLPQ-EVKDVRTDLE 717
>At5g26910.1 68418.m03209 expressed protein
Length = 900
Score = 33.1 bits (72), Expect = 0.60
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 224 KSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQ--IR-SKISSVKNMNQSHKSL 280
K + ++ G VT+N K+ + + +K Q +R + IS KNM + +
Sbjct: 348 KPSYVSAQAKAGTTPLSVTRNSANQKEKADAKKCVVKSQNALRGAPISMGKNMFKQNNQ- 406
Query: 281 IEQHINSNTIENSRKVDKNQAKDYNKF-NKVNILSKTPVKQLEISDTTEEKNDRSSKIMI 339
+Q+ N + +++ +K NK NKV + S + KQL +S + EKN +S +
Sbjct: 407 -KQNCRDNQPSMTSVLNQKSSKVNNKVVNKVPVESGSISKQLGLSTASAEKN--TSLSLS 463
Query: 340 EKSTLTDVKDI 350
K TL K +
Sbjct: 464 RKKTLPRSKKL 474
>At4g24170.1 68417.m03468 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1004
Score = 33.1 bits (72), Expect = 0.60
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 204 NREQQSNDHNNHQFNTHDMCKSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQI 263
N E Q +D ++ N DM S + E G KK+ ++ + +Q E + + K++
Sbjct: 523 NYESQKDDADSSIKNI-DMELSLYTKPEAEDGVSVKKLIEDVQETEQSVEKQKQSPKKEE 581
Query: 264 RSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEI 323
+ S Q KSL E+ ++ DK +A+D NK+ +T + +E
Sbjct: 582 MEQYLSRDMSEQVTKSLPEE---EQCVQEYGAYDKLEAQDVLTINKLEESQQTE-QSVEK 637
Query: 324 SDTTEEKNDRSSKIMIEKSTLTDVKDITYIKYP 356
DT +KN S K ++++ D + Y P
Sbjct: 638 EDT--KKNLSSKKEDLKQNLSMDQSEQLYKSPP 668
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 32.7 bits (71), Expect = 0.79
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 249 KQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYN-KF 307
K TE E + KQ+ +S++S+ + K+L+EQ NT+E K K+
Sbjct: 1000 KSETEAELEREKQE-KSELSN--QITDVQKALVEQEAAYNTLEEEHKQINELFKETEATL 1056
Query: 308 NKVNILSKTPVKQLEISDTTEEKNDRSSKIMIEKSTLTDVKD 349
NKV + K + LE + +E R S I + + T+ +++
Sbjct: 1057 NKVTVDYKEAQRLLE--ERGKEVTSRDSTIGVHEETMESLRN 1096
>At5g22030.2 68418.m02564 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 32.7 bits (71), Expect = 0.79
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 292 NSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDT 326
NS + + + K NK ++N+L++ PVK+L++ DT
Sbjct: 418 NSIEAEMLKEKPVNKSKRLNVLARWPVKELDVYDT 452
>At5g22030.1 68418.m02563 ubiquitin-specific protease 8, putative
(UBP8) similar to ubiquitin-specific protease 8 partial
sequence GI:11993469 [Arabidopsis thaliana]
Length = 622
Score = 32.7 bits (71), Expect = 0.79
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 292 NSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDT 326
NS + + + K NK ++N+L++ PVK+L++ DT
Sbjct: 418 NSIEAEMLKEKPVNKSKRLNVLARWPVKELDVYDT 452
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 32.3 bits (70), Expect = 1.0
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 211 DHNNHQFNTHDMCKSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSV 270
D N + + +S +ESE + K ++VT+ QLK L E E++ + ++ +I +
Sbjct: 96 DQVNGMKHELESLRSQKDESEAKLEKKVEEVTETKMQLKSLKE-ETEEERNRLSEEIDQL 154
Query: 271 KNMNQS-HKSLIE 282
K NQ H+ + E
Sbjct: 155 KGENQMLHRRISE 167
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 31.9 bits (69), Expect = 1.4
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 218 NTHDMCKSTSEESEPAIGK-GTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQS 276
+T + C +S E EP + G K K + + ++ T E + +I + +
Sbjct: 55 STSNDCGFSSPEKEPTKERTGENKTVKFHLKRRETTTTEKATTNSVLELQIRDLTRIQTL 114
Query: 277 HKSLIEQHINSNTIENSRK 295
HK ++E++ N NT+ +K
Sbjct: 115 HKRVLEKN-NQNTVSQKQK 132
>At3g24880.1 68416.m03120 expressed protein
Length = 1957
Score = 31.9 bits (69), Expect = 1.4
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 231 EPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTI 290
+ +G+ TK TK + Q T I S+ I + ++ SVK NQSH+S E +
Sbjct: 409 DQTVGEMTK--TKIEDETGQSTTIISECIPE-CEMQMKSVKIENQSHRSTAEMQTKEKSS 465
Query: 291 ENSRKVDKNQAKDYNKFNKVNILSKTPVKQL 321
E +++ N +ILS+ P L
Sbjct: 466 ETEKRLQDGLVVLENDSKVGSILSENPSSTL 496
>At3g24870.1 68416.m03119 expressed protein
Length = 1841
Score = 31.9 bits (69), Expect = 1.4
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 231 EPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTI 290
+ +G+ TK TK + Q T I S+ I + ++ SVK NQSH+S E +
Sbjct: 404 DQTVGEMTK--TKIEDETGQSTTIISECIPE-CEMQMKSVKIENQSHRSTAEMQTKEKSS 460
Query: 291 ENSRKVDKNQAKDYNKFNKVNILSKTPVKQL 321
E +++ N +ILS+ P L
Sbjct: 461 ETEKRLQDGLVVLENDSKVGSILSENPSSTL 491
>At1g65200.1 68414.m07392 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1101
Score = 31.9 bits (69), Expect = 1.4
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 18/133 (13%)
Query: 406 KNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQS 465
+ G T+ +K K N+TS + HL +T++H + L+ S++
Sbjct: 707 EEGMTLPSKKKKNKNNKKNSTSMSSHL-----DKTVQHE-----HSANLELDSTSPSLKP 756
Query: 466 CRDDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHTKDIAVKEQSSNMEDWTAEINS 525
+D TS +G KSN NN E ++ H +D K S E+ T NS
Sbjct: 757 VEEDTLTSESG-LLEMKSNINN-------QEETTKALHGEDSLSKHPVSAHEEATTRYNS 808
Query: 526 KQALLIVLLVNKK 538
+++ L N K
Sbjct: 809 ILDMVLKALCNLK 821
>At5g45850.1 68418.m05640 expressed protein contains Pfam profile:
PF05097 protein of unknown function (DUF688)
Length = 444
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 532 VLLVNKKETPNLMRFKSILLQGIAVNRIALACELDMEIEVIEREYIEFSQYEGISYIPAS 591
+ L KKE + K Q IA+ R+++A D+ +V + E+ + + +GI + S
Sbjct: 157 ISLKMKKEASRVKAEKK-KKQSIALQRVSMAINQDLNNDVDDEEHCDHNHVDGIDALVYS 215
Query: 592 IQNRDRLFEELHWIAKTTAADYQRP 616
++ L W + D P
Sbjct: 216 NDSKKGQLGFLPWFCSKNSVDVLTP 240
>At4g08430.1 68417.m01392 Ulp1 protease family protein similar to
At5g45570, At5g28235; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 808
Score = 31.5 bits (68), Expect = 1.8
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 15/102 (14%)
Query: 254 IESKPIKQQIRSKISSVKNMNQSHKSLIEQHI----NSNTIENSRKVDKNQAKDYNKFNK 309
++ PI++ ++ ++SVKNM + K L ++ + TI N KV+K + +
Sbjct: 344 VDGLPIQRVVKKAVNSVKNMEAATKVLTKKKVAKSDKKKTIVNVEKVEKPKPE------- 396
Query: 310 VNILSKTPVKQLEISDTTEEKNDRSSKIMIEKSTLTDVKDIT 351
+ KT VK +E D+ + + +S K+ DV D+T
Sbjct: 397 ---MKKTAVK-VEKVDSPKPEKKKSVVAPTTKTFDDDVVDVT 434
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 31.5 bits (68), Expect = 1.8
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 486 NNINVAKLESNEQSQQSH--TKDIAVKEQSSNMEDWTAEINSKQALLIVLLVNKKETPNL 543
NNI + E N ++H TK++ ++ + NM +AE +KQ L V + K E
Sbjct: 222 NNIESCEREINTLKYETHVITKELEIRNEEKNMSMRSAEAANKQHLEGVKKIAKLEA-EC 280
Query: 544 MRFKSILLQGIAVNRIALACELDMEIE 570
R ++++ + + ALA ++ ME+E
Sbjct: 281 QRLRTLVRKKLP-GPAALA-QMKMEVE 305
>At5g62280.1 68418.m07819 expressed protein
Length = 236
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 516 MEDWTAEINSKQALLIVLLVNKK-ETPNLMRFKSILLQGIAVNRIALAC 563
M W+AE N+ +A L L +++ + PN+ F S L G + +IA+AC
Sbjct: 1 MAFWSAE-NATKAYLSTLKTDQRTKEPNVAEFISALAAGNSARKIAVAC 48
>At3g19210.1 68416.m02438 DNA repair protein RAD54, putative similar
to RAD54 GB:CAA71278 from [Drosophila melanogaster]
(Mol. Cell. Biol.(1997) 17 (10), 6097-6104)
Length = 852
Score = 31.1 bits (67), Expect = 2.4
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 281 IEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDTTEEKNDRSSKIMIE 340
IE +++ T+E S + ++NQ + FNK + P++ L +++TT+ + K +
Sbjct: 766 IESNVSPKTVE-SEEHNRNQPVNKRAFNKPQQRPREPLQPLSLNETTKRVKLSTYKRLHG 824
Query: 341 KSTLTDVK 348
S + D +
Sbjct: 825 NSNIDDAQ 832
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 30.7 bits (66), Expect = 3.2
Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 235 GKGTKKVTKNYGQLKQLTEIESKPIKQQIRS----KISSVKNMNQSHKSLIEQHINSNTI 290
G G K+ N + K+ EI+ + KQ + K S K + +S + ++ +
Sbjct: 843 GDGEKEKV-NLEEWKKHDEIKEESSKQDNVTGGDVKKSPPKESKDTMESKRDDQKENSKV 901
Query: 291 ENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDTTEEKNDRSSKIMIEKSTLTDVKDI 350
+ VDK +A D ++ K N + K ++ + EEKN I +S D ++I
Sbjct: 902 QEKGDVDKGKAADLDEGKKENDVKAESSKSDKVIEGDEEKNPPQKSKDIIQSKPDDHREI 961
Query: 351 TYIK 354
+ ++
Sbjct: 962 SKVQ 965
>At4g10890.1 68417.m01772 expressed protein
Length = 527
Score = 30.7 bits (66), Expect = 3.2
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 429 NKHLTNSK-PKETMKHNPIRQFRDSILQFLHKKSSVQSCRDDN-KTSCNGTTCTTKSNAN 486
+ L N K K+ P+R + IL L K+++ ++C D+N +TS T +S +
Sbjct: 426 DSRLENCKLSKDVPPPKPLRDV-NQILSILQKRNATETCSDNNMQTSVLLTKVPPESETS 484
Query: 487 NINVAKLESNEQSQQSHTKDIAVKEQSS 514
+ K+ES ++++ T+ + V+E SS
Sbjct: 485 KRH--KMES-ISTKEASTEQVMVQETSS 509
>At3g55060.1 68416.m06115 expressed protein contains weak similarity
to intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae];
expression supported by MPSS
Length = 896
Score = 30.7 bits (66), Expect = 3.2
Identities = 26/143 (18%), Positives = 61/143 (42%), Gaps = 11/143 (7%)
Query: 391 EKMQQLIVKMHSVAVKNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNPIRQFR 450
E +++ + + SV N + T + + N S ++L ET+ + +R+
Sbjct: 691 ENLKRSLQTVTSVVASNSESSSSN--TGRPREQRNQSVEENLRAELSAETLITSLVRE-- 746
Query: 451 DSILQFLHKKSSVQSCRDDNKTSCNGTT---CTTKSNANNINVAKLESNEQSQQSHTKDI 507
+ K+ ++ + + + G C +S+ +N++V E + Q K+
Sbjct: 747 ----KLYSKEKEIEQLQAELAAAVRGNEILRCEVQSSLDNLSVTTHELKDLKHQMLKKEE 802
Query: 508 AVKEQSSNMEDWTAEINSKQALL 530
+++ SN+++ E+ ALL
Sbjct: 803 SIRRLESNLQEAAKEMARLNALL 825
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 30.7 bits (66), Expect = 3.2
Identities = 29/141 (20%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 388 IDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKKKSA-NNTSENKHLTNSKPKETMKHNPI 446
+ +EK ++ + K + + D+++ T++ S + S ++ +S E + P
Sbjct: 49 VQKEKAEKTVPKKVESSSSDASDSDEEEKTKETPSKLKDESSSEEEDDSSSDEEIA--PA 106
Query: 447 RQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHTKD 506
++ + I KK+ V+S D+ ++ + T K + AK+ES+ S + +
Sbjct: 107 KKRPEPI-----KKAKVESSSSDDDSTSDEETAPVKKQPAVLEKAKVESSSSDDDSSSDE 161
Query: 507 --IAVKEQSSNMEDWTAEINS 525
+ VK+Q + +E E +S
Sbjct: 162 ETVPVKKQPAVLEKAKIESSS 182
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 30.7 bits (66), Expect = 3.2
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 224 KSTSEESEPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQ 283
KS S+E E + +KK +K Y ++++ E P +SK S K+ S +S E+
Sbjct: 41 KSKSKEEEKP--EKSKKKSKKYEEVEE-EEKSPSPSPSPKKSKESKKKHKRSSDES--EE 95
Query: 284 HINSN-------TIENSRKVD------KNQAKDYNKFNKVNILSKTPVKQLEISDTTEEK 330
++S TIE+ + KN + Y+K +N++ KT K ++ E
Sbjct: 96 IVDSKPVTVPIVTIESDSDFEFDKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFES 155
Query: 331 NDRSS 335
DR S
Sbjct: 156 ADRDS 160
>At5g41410.1 68418.m05031 homeodomain protein (BEL1) identical to
cDNA homeobox protein (BEL1) GI:28202124
Length = 611
Score = 30.3 bits (65), Expect = 4.2
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 204 NREQQSNDHNNHQFNTHDMCK-STSEESEPAIGKGTKKVTKNYGQL-KQLTEIESKPIKQ 261
N Q+N++NNHQ + H + +S+ PA +++ + L + ++ E +K
Sbjct: 173 NSHHQNNNNNNHQHHNHHQFQIGSSKYLSPA-----QELLSEFCSLGVKESDEEVMMMKH 227
Query: 262 QIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNK 309
+ + K + + SH S +QH S T + + V + ++ + K
Sbjct: 228 KKKQKGKQQEEWDTSHHSNNDQHDQSATTSSKKHVPPLHSLEFMELQK 275
>At4g21350.1 68417.m03084 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582198; contains Pfam
profile PF04564: U-box domain
Length = 374
Score = 30.3 bits (65), Expect = 4.2
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 403 VAVKNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNPIRQFRDSILQFLH---K 459
V +++G T D+ Q S N T +T ET P R IL F H K
Sbjct: 22 VILQSGHTFDRVSIQQWIDSGNRTCP---ITKLPLSETPYLIPNHALRSLILNFAHVSLK 78
Query: 460 KSSVQSCRDDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHTKDIAVKEQ 512
+SS + ++ S + +T + ++ N +KLES + + +D +++ +
Sbjct: 79 ESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRDSSIRRK 131
>At4g18490.1 68417.m02742 hypothetical protein
Length = 594
Score = 30.3 bits (65), Expect = 4.2
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 253 EIESKP-IKQQIRSKISSVKNMNQSHKSLIEQHINSNTIEN-SRKVDKNQAKDYNKFNKV 310
E E +P I++ I S ++ + + K + + H N T+EN + ++D + + N +
Sbjct: 334 ETEIQPVIRENIGSSLNPTNDTSSHEKIIHKDHSNGKTVENVAGQMDHLKLQAKNTTREK 393
Query: 311 NILSKTPVKQLEISDTTEEKNDRSS 335
+IL +L+ S T++ ++ S
Sbjct: 394 SILQINISSKLDASSLTQKLSNHLS 418
>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
alpha glucosidase II beta subunit from GI:2104691 [Mus
musculus]
Length = 647
Score = 29.9 bits (64), Expect = 5.6
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 274 NQSHKSLIEQHIN-SNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDTTEEKND 332
+ S+KS + ++ S T N ++K Q N VN+ TPV + E +E ++
Sbjct: 434 SSSYKSDADDDVDFSETTSNPTWLEKIQKTVKNILLAVNLFQTTPVDKSEADRVRKEYDE 493
Query: 333 RSSKIMIEKSTLTDVK 348
SSK+ +S ++ ++
Sbjct: 494 SSSKLNKIQSRISSLE 509
Score = 29.5 bits (63), Expect = 7.4
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 216 QFNTHDMCKSTSEESEPAIGKGTKK--VTKNYGQLKQLTEIESKPI-KQQIRSKISSVKN 272
+++ H C++T E+ A + KK T N G + + EIE + ++ +++ +K+
Sbjct: 122 EYDGHVSCQNTCWEAGKAARENLKKKIETYNQGLVIRRQEIEQAKVGLEKDAAELKKLKS 181
Query: 273 MNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILSKTPVKQLEISDTTEEKND 332
+ K L++Q + E KV++ + K K ++ +Q + EEK D
Sbjct: 182 EQKILKGLVDQ--LKDRKEQIEKVEEKERLQKEKEEKEKKEAELAAQQGK--GDAEEKTD 237
Query: 333 RSSKI 337
S K+
Sbjct: 238 DSEKV 242
>At2g42830.2 68415.m05303 agamous-like MADS box protein AGL5 /
floral homeodomain transcription factor (AGL5) identical
to SP|P29385 Agamous-like MADS box protein AGL5
{Arabidopsis thaliana}
Length = 248
Score = 29.9 bits (64), Expect = 5.6
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 249 KQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNK-F 307
K++ EIE + +RSKI+ + Q S+I Q T+ S +Q+ YN+ +
Sbjct: 170 KRVKEIELQNDNMYLRSKITERTGLQQQESSVIHQ----GTVYESGVTSSHQSGQYNRNY 225
Query: 308 NKVNIL 313
VN+L
Sbjct: 226 IAVNLL 231
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 29.9 bits (64), Expect = 5.6
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 417 TQKKKSANNTSEN-KHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQSCRDDNKTSCN 475
T+ KKS T E KH + T P + + + ++ + S ++ +CN
Sbjct: 388 TEGKKSPKKTPEPVKHQNGLENSSTQHEMPEEENSNEKSRKRKREQNQNSNLNETDETCN 447
Query: 476 GTTCTTKSNANNINVAKLESNEQSQQSHTKDIAVKEQSSNMED-WTAEINSKQA 528
+ ++ I V ++ S + + +QSSN+ D A++ QA
Sbjct: 448 VSKAGVNGTSDTIRVDDVDDQPLSSWINIPTVLSSDQSSNVVDNSAADVEETQA 501
>At5g28235.1 68418.m03421 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; simlar to At4g08430, At5g45570
Length = 568
Score = 29.5 bits (63), Expect = 7.4
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 254 IESKPIKQQIRSKISSVKNMNQSHKSLIEQHI----NSNTIENSRKVDKNQAKDYNKFNK 309
++ PI++ ++ ++SVKN + K L ++ + TI N KV+K + + K
Sbjct: 180 VDGLPIQRVVKKTVNSVKNKEAATKVLTKKKVAKSDKKKTIVNVEKVEKPKPEMKKTVVK 239
Query: 310 V-NILSKTPVKQLEISDTTEEKNDRSSKIMIEKSTLTDVK 348
V + S P+++ ++ T + D + +K ++K
Sbjct: 240 VEKVDSPKPLQKKSVAAPTTKTFDDDVVDVTDKVNADNLK 279
>At5g09850.1 68418.m01139 transcription elongation factor-related
low similarity to SP|P10712 Transcription elongation
factor S-II (Transcription elongation factor A) {Mus
musculus}
Length = 353
Score = 29.5 bits (63), Expect = 7.4
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 446 IRQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTTKSNANNINVAKLESNEQSQQSHT- 504
+++ RD+I++ L+ S CR+ + T NN V + E+ E+ ++ T
Sbjct: 36 LKRRRDNIVERLYATSMANKCRNCDFGGGGNVTEAAIGRVNNGRVHE-ETEEEDEEGVTA 94
Query: 505 -KDIAVKEQSSNMED 518
+ V+E+S N+ED
Sbjct: 95 AAEEEVREKSVNVED 109
>At1g65280.1 68414.m07402 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 598
Score = 29.5 bits (63), Expect = 7.4
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 245 YGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSR-KVDKNQAKD 303
Y + L E + +K+ + +++ N + KSL+E+H ++ +SR K K +
Sbjct: 483 YNKASALASNEGENMKRSMDAELVDKYNKEKRAKSLVEKHREDSSSSSSRLKKKKKLSSS 542
Query: 304 YNKFNKVNILSKTPVK 319
K K + K P K
Sbjct: 543 KEKTEKDEWVGKHPWK 558
>At1g40129.1 68414.m04766 hypothetical protein
Length = 567
Score = 29.5 bits (63), Expect = 7.4
Identities = 14/79 (17%), Positives = 38/79 (48%)
Query: 231 EPAIGKGTKKVTKNYGQLKQLTEIESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTI 290
E + T + ++ K+L E + ++Q + + ++ + + + EQ + S
Sbjct: 18 ELEVAMSTTEERSSHNHNKRLIEALTTEMEQSFDNHLDQIRQGHHRARKMKEQELKSKPP 77
Query: 291 ENSRKVDKNQAKDYNKFNK 309
+NS + +++ +DY ++ K
Sbjct: 78 DNSLRSTQSRKEDYLEWEK 96
>At5g52280.1 68418.m06488 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 853
Score = 29.1 bits (62), Expect = 9.8
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 478 TCTTKSNANNINVAKLESNEQSQQSHTKDIAVKEQSSNMEDWTAEINSKQALL 530
T T + ANN+ + E +++HT+ KEQ ++E+ ++ K +L
Sbjct: 605 TKKTLAEANNLRLQNKTLEEMQEKTHTEITQEKEQRKHVEEKNKALSMKVQML 657
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 9.8
Identities = 55/300 (18%), Positives = 120/300 (40%), Gaps = 17/300 (5%)
Query: 255 ESKPIKQQIRSKISSVKNMNQSHKSLIEQHINSNTIENSRKVDKNQAKDYNKFNKVNILS 314
E + +K++ I ++ ++ S++ L+E+ T+ + + + Y K K+ LS
Sbjct: 745 EVEVLKEREAENIKQIEELSLSNERLVEKEAKLQTVVQENEELREKESAYQK--KIEELS 802
Query: 315 KTPVKQLEISDTTEEKNDRSSKIMIEKSTLTDVKDITYIK--YPLVIIGVHLFTSANCVS 372
K EI E K S++ E L + +++ Y+K L + +L N +
Sbjct: 803 KVD----EIFADREAKLQSSTQ---ENEELRE-REVAYLKKIEELAKLQENLLDKENEL- 853
Query: 373 NGDPPKVTWINNDNYIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQKKKSANNTSENKHL 432
+ ++ + + + E+K+++L S+ VK D +K KS S
Sbjct: 854 HDMVLEIEDLKAKDSLAEKKIEELSNLNKSLLVKESELQDVVFENEKLKSKEALSLKTTE 913
Query: 433 TNSKPKETMKHNPIRQFRDSILQFLHKKSSVQSCRDDNKTSCNGTTCTTKSNANNINVAK 492
S K+T+ ++ + ++++ ++K Q+ K + + N
Sbjct: 914 ELSDVKQTLADKE-KELKTAVVE--NEKLKAQAASSFQKIEELKNLKQSLLDKENELEGV 970
Query: 493 LESNEQSQQSHTKDIAVKEQSSNME-DWTAEINSKQALLIVLLVNKKETPNLMRFKSILL 551
++NE+ + + ++ ++E W + N Q L + K L + K LL
Sbjct: 971 FQANEELKAKEASSLKKIDELLHLEQSWIDKGNENQELKVREASAAKRIEELSKMKESLL 1030
>At3g26932.1 68416.m03370 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 301
Score = 29.1 bits (62), Expect = 9.8
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 362 VHLFTSANCVSNGDPPKVTWINNDNYIDEE-KMQQLIVKMHSVAVKNGRTMDKQKPTQKK 420
++L+T+ S+ PP+ W + N E+ K++ L+ K A K +++D KP +
Sbjct: 165 INLYTN-EASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKK-QSLDDPKPEMRI 222
Query: 421 KSAN 424
K+++
Sbjct: 223 KTSS 226
>At2g42320.1 68415.m05238 nucleolar protein gar2-related contains
weak similarity to Swiss-Prot:P41891 protein gar2
[Schizosaccharomyces pombe]
Length = 669
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 480 TTKSNANNINVAKLESNEQSQQSHTKDIAVKEQSSNM 516
+TKS + + K S ++++Q KD+ KE+SSN+
Sbjct: 15 STKSVRKDQKLQKTNSQKKTEQEKHKDLDTKEESSNI 51
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 29.1 bits (62), Expect = 9.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 302 KDYNKFNKVNILSKTPVKQLEISDTTEEKNDRSSKIMIEKSTLTDVKDITYIK 354
KDY V T K +E D T EK +EK+ T+ KD+T K
Sbjct: 209 KDYTVDKAVEARDYTAEKAIEAKDKTAEKTGEYKDYTVEKA--TEGKDVTVSK 259
>At2g27950.1 68415.m03388 expressed protein
Length = 767
Score = 29.1 bits (62), Expect = 9.8
Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 6/181 (3%)
Query: 405 VKNGRTMDKQKPTQKKKSANNTSENKHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQ 464
++NG DK+KPT + +H + +E + + + H ++S
Sbjct: 283 LRNGDNDDKEKPTSSAATELGFLRERHTVSELREEFISR--LDRSASGQASSSHSETSSN 340
Query: 465 SCRDDNKTSCNGTTCTTKSN---ANNINVAKLESNEQSQQSHTKDIAVKEQSSNMEDWTA 521
+ D N+ N C N + + N+ S T +S+++E+ TA
Sbjct: 341 AETDHNRGEQNDLNCLDSINDADGGSDQNGREADNQSSLDEITNSGRCCSRSTSLEERTA 400
Query: 522 EINSKQALLI-VLLVNKKETPNLMRFKSILLQGIAVNRIALACELDMEIEVIEREYIEFS 580
+ Q I + +T + I + I C+L IE+ + ++ S
Sbjct: 401 RVEGWQRSEIDDFSQRRNDTEVDLNATGCSSSSIHGDEIRYGCQLRETIEIPYEQSLQIS 460
Query: 581 Q 581
+
Sbjct: 461 E 461
>At1g02990.2 68414.m00269 expressed protein similar to
mature-parasite-infected erythrocyte surface antigen
(GI:160409) {Plasmodium falciparum}
Length = 1238
Score = 29.1 bits (62), Expect = 9.8
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 18/111 (16%)
Query: 373 NGDPPKVTWINNDNYIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQ----------KKKS 422
+ P +V + +D I K Q+L HSV G KQ ++ KK+S
Sbjct: 936 SASPAQVEVLGHDTEISNTKKQRLRNDNHSVTHDEGSRNQKQNGSRHKDHVGLSPFKKES 995
Query: 423 ANNTSEN--------KHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQS 465
+ T+ N KH+ + H + + L+FLH S ++S
Sbjct: 996 TSQTASNSIKEATDLKHMADRLKNAVSNHESTGVYFQAALKFLHGASLLES 1046
>At1g02990.1 68414.m00270 expressed protein similar to
mature-parasite-infected erythrocyte surface antigen
(GI:160409) {Plasmodium falciparum}
Length = 1069
Score = 29.1 bits (62), Expect = 9.8
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 18/111 (16%)
Query: 373 NGDPPKVTWINNDNYIDEEKMQQLIVKMHSVAVKNGRTMDKQKPTQ----------KKKS 422
+ P +V + +D I K Q+L HSV G KQ ++ KK+S
Sbjct: 936 SASPAQVEVLGHDTEISNTKKQRLRNDNHSVTHDEGSRNQKQNGSRHKDHVGLSPFKKES 995
Query: 423 ANNTSEN--------KHLTNSKPKETMKHNPIRQFRDSILQFLHKKSSVQS 465
+ T+ N KH+ + H + + L+FLH S ++S
Sbjct: 996 TSQTASNSIKEATDLKHMADRLKNAVSNHESTGVYFQAALKFLHGASLLES 1046
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.311 0.126 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,649,032
Number of Sequences: 28952
Number of extensions: 521504
Number of successful extensions: 1778
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1749
Number of HSP's gapped (non-prelim): 73
length of query: 657
length of database: 12,070,560
effective HSP length: 86
effective length of query: 571
effective length of database: 9,580,688
effective search space: 5470572848
effective search space used: 5470572848
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 62 (29.1 bits)
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