GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001465-TA|BGIBMGA001465-PA|undefined
         (181 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 35   0.19 
AL833924-1|CAD38780.1| 1033|Homo sapiens hypothetical protein pr...    35   0.19 
AK022687-1|BAB14179.1|  452|Homo sapiens protein ( Homo sapiens ...    35   0.19 

>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 49   NVISELQLVFNDVNCQKCTDCMERAVKAFIINQHIISSRPNLEDFQNDVLYEKLNINRNK 108
            N + EL L  N   C +    M   VK F++  H ++S    + FQ+ V  E LN   +K
Sbjct: 4694 NPLMELPLAVNPTGCARSEPKMSAHVKRFVLRPHTLNSTSTSKSFQSTVTGE-LNAPYSK 4752

Query: 109  RDANKK 114
            +  + K
Sbjct: 4753 QFVHSK 4758


>AL833924-1|CAD38780.1| 1033|Homo sapiens hypothetical protein
           protein.
          Length = 1033

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 49  NVISELQLVFNDVNCQKCTDCMERAVKAFIINQHIISSRPNLEDFQNDVLYEKLNINRNK 108
           N + EL L  N   C +    M   VK F++  H ++S    + FQ+ V  E LN   +K
Sbjct: 816 NPLMELPLAVNPTGCARSEPKMSAHVKRFVLRPHTLNSTSTSKSFQSTVTGE-LNAPYSK 874

Query: 109 RDANKK 114
           +  + K
Sbjct: 875 QFVHSK 880


>AK022687-1|BAB14179.1|  452|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12625 fis, clone NT2RM4001783, weakly similar to
           ZINC FINGER PROTEIN HRX. ).
          Length = 452

 Score = 34.7 bits (76), Expect = 0.19
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 49  NVISELQLVFNDVNCQKCTDCMERAVKAFIINQHIISSRPNLEDFQNDVLYEKLNINRNK 108
           N + EL L  N   C +    M   VK F++  H ++S    + FQ+ V  E LN   +K
Sbjct: 235 NPLMELPLAVNPTGCARSEPKMSAHVKRFVLRPHTLNSTSTSKSFQSTVTGE-LNAPYSK 293

Query: 109 RDANKK 114
           +  + K
Sbjct: 294 QFVHSK 299


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.135    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,779,313
Number of Sequences: 224733
Number of extensions: 832444
Number of successful extensions: 2452
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2449
Number of HSP's gapped (non-prelim): 3
length of query: 181
length of database: 73,234,838
effective HSP length: 85
effective length of query: 96
effective length of database: 54,132,533
effective search space: 5196723168
effective search space used: 5196723168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)