GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001464-TA|BGIBMGA001464-PA|IPR001708|60 kDa inner
membrane insertion protein
         (396 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   5.0  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   5.0  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 113 TLDVPWWGAIVLGTIVVRVVMFPLVIL 139
           TL   +W A+   TI+    + PL+IL
Sbjct: 227 TLANTFWSALYFLTIIFLFFIIPLIIL 253


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 146 QMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQ 178
           Q+   LPEI     +   +RQ  N    ARY Q
Sbjct: 51  QIKGALPEIIGKNCERCDSRQVANARRIARYVQ 83


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,017
Number of Sequences: 317
Number of extensions: 3139
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 396
length of database: 114,650
effective HSP length: 58
effective length of query: 338
effective length of database: 96,264
effective search space: 32537232
effective search space used: 32537232
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 44 (21.8 bits)