Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001464-TA|BGIBMGA001464-PA|IPR001708|60 kDa inner
membrane insertion protein
(396 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF145596-1|AAD38571.1| 441|Drosophila melanogaster BcDNA.GH0222... 478 e-135
AE014296-1858|AAN11911.1| 441|Drosophila melanogaster CG6404-PB... 478 e-135
AE014296-1857|AAF50127.2| 441|Drosophila melanogaster CG6404-PA... 478 e-135
AY069618-1|AAL39763.1| 351|Drosophila melanogaster LD38503p pro... 86 9e-17
AE014296-1579|AAF50323.1| 351|Drosophila melanogaster CG4942-PA... 86 9e-17
>AF145596-1|AAD38571.1| 441|Drosophila melanogaster BcDNA.GH02220
protein.
Length = 441
Score = 478 bits (1179), Expect = e-135
Identities = 213/317 (67%), Positives = 264/317 (83%), Gaps = 1/317 (0%)
Query: 72 SDAVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRV 131
+D ++ + A GEP+FASIGLGGW PVG+VQNC E+LH T D+PWWG I +GT+ VR
Sbjct: 106 ADGLNVMDVMNAAGEPSFASIGLGGWSPVGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRT 165
Query: 132 VMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMKEKGLNP 191
++FPLVIL+QRNSA+MNNN+P++Q+LQ+KMT+ARQ+GN IE+ARYAQEMMLFM+EKG+NP
Sbjct: 166 IIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNP 225
Query: 192 LKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATM 251
LKN++VPLAQ PLFISFFMGLR MAN PVESM GGL+WF DLT+ D ++LLP+ITSAT+
Sbjct: 226 LKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPFYLLPLITSATL 285
Query: 252 WATIELGVDGGRLDAQNMQVMRYVLRAIPLVMIPFTINFPGAILVYWCSSNFISLMQVGF 311
+ TIE+G D RL A NM M+YVLRA+P+V+ PFT+NFP AIL YW SNFISL QV
Sbjct: 286 YLTIEIGTDSARLSAANMNTMKYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQVAV 345
Query: 312 LKIPAVREYFKIPKLIKHSADALPIKKKGFVEGAKDSWTNMKLSKELAERQRIDEMIFTK 371
L+IP+VREYFKI K++ H+ ALP KKGFV G K+SW NMK+SKE+ ERQR+DE+ F K
Sbjct: 346 LRIPSVREYFKIEKMLTHAPSALP-PKKGFVGGMKESWDNMKISKEIEERQRLDEIRFAK 404
Query: 372 AGKGPLQKTYKYDPTKL 388
AGKGPL KTYK+DPTK+
Sbjct: 405 AGKGPLVKTYKFDPTKV 421
>AE014296-1858|AAN11911.1| 441|Drosophila melanogaster CG6404-PB,
isoform B protein.
Length = 441
Score = 478 bits (1179), Expect = e-135
Identities = 213/317 (67%), Positives = 264/317 (83%), Gaps = 1/317 (0%)
Query: 72 SDAVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRV 131
+D ++ + A GEP+FASIGLGGW PVG+VQNC E+LH T D+PWWG I +GT+ VR
Sbjct: 106 ADGLNVMDVMNAAGEPSFASIGLGGWSPVGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRT 165
Query: 132 VMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMKEKGLNP 191
++FPLVIL+QRNSA+MNNN+P++Q+LQ+KMT+ARQ+GN IE+ARYAQEMMLFM+EKG+NP
Sbjct: 166 IIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNP 225
Query: 192 LKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATM 251
LKN++VPLAQ PLFISFFMGLR MAN PVESM GGL+WF DLT+ D ++LLP+ITSAT+
Sbjct: 226 LKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPFYLLPLITSATL 285
Query: 252 WATIELGVDGGRLDAQNMQVMRYVLRAIPLVMIPFTINFPGAILVYWCSSNFISLMQVGF 311
+ TIE+G D RL A NM M+YVLRA+P+V+ PFT+NFP AIL YW SNFISL QV
Sbjct: 286 YLTIEIGTDSARLSAANMNTMKYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQVAV 345
Query: 312 LKIPAVREYFKIPKLIKHSADALPIKKKGFVEGAKDSWTNMKLSKELAERQRIDEMIFTK 371
L+IP+VREYFKI K++ H+ ALP KKGFV G K+SW NMK+SKE+ ERQR+DE+ F K
Sbjct: 346 LRIPSVREYFKIEKMLTHAPSALP-PKKGFVGGMKESWDNMKISKEIEERQRLDEIRFAK 404
Query: 372 AGKGPLQKTYKYDPTKL 388
AGKGPL KTYK+DPTK+
Sbjct: 405 AGKGPLVKTYKFDPTKV 421
>AE014296-1857|AAF50127.2| 441|Drosophila melanogaster CG6404-PA,
isoform A protein.
Length = 441
Score = 478 bits (1179), Expect = e-135
Identities = 213/317 (67%), Positives = 264/317 (83%), Gaps = 1/317 (0%)
Query: 72 SDAVSAVQSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRV 131
+D ++ + A GEP+FASIGLGGW PVG+VQNC E+LH T D+PWWG I +GT+ VR
Sbjct: 106 ADGLNVMDVMNAAGEPSFASIGLGGWSPVGMVQNCLEFLHCTWDIPWWGTIAIGTLAVRT 165
Query: 132 VMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMKEKGLNP 191
++FPLVIL+QRNSA+MNNN+P++Q+LQ+KMT+ARQ+GN IE+ARYAQEMMLFM+EKG+NP
Sbjct: 166 IIFPLVILAQRNSAKMNNNMPQMQMLQLKMTEARQSGNAIESARYAQEMMLFMREKGVNP 225
Query: 192 LKNLIVPLAQTPLFISFFMGLRGMANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATM 251
LKN++VPLAQ PLFISFFMGLR MAN PVESM GGL+WF DLT+ D ++LLP+ITSAT+
Sbjct: 226 LKNMVVPLAQAPLFISFFMGLRQMANAPVESMRDGGLFWFTDLTMADPFYLLPLITSATL 285
Query: 252 WATIELGVDGGRLDAQNMQVMRYVLRAIPLVMIPFTINFPGAILVYWCSSNFISLMQVGF 311
+ TIE+G D RL A NM M+YVLRA+P+V+ PFT+NFP AIL YW SNFISL QV
Sbjct: 286 YLTIEIGTDSARLSAANMNTMKYVLRALPIVIFPFTMNFPAAILTYWACSNFISLGQVAV 345
Query: 312 LKIPAVREYFKIPKLIKHSADALPIKKKGFVEGAKDSWTNMKLSKELAERQRIDEMIFTK 371
L+IP+VREYFKI K++ H+ ALP KKGFV G K+SW NMK+SKE+ ERQR+DE+ F K
Sbjct: 346 LRIPSVREYFKIEKMLTHAPSALP-PKKGFVGGMKESWDNMKISKEIEERQRLDEIRFAK 404
Query: 372 AGKGPLQKTYKYDPTKL 388
AGKGPL KTYK+DPTK+
Sbjct: 405 AGKGPLVKTYKFDPTKV 421
>AY069618-1|AAL39763.1| 351|Drosophila melanogaster LD38503p
protein.
Length = 351
Score = 85.8 bits (203), Expect = 9e-17
Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 99 PVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VVMFPLVILSQRNSAQMNN---NLPEI 154
PV +Q+ +H +PWW +IVL T + R VV PL I + +A++ +P I
Sbjct: 67 PVAYMQDVLIKIHDYSGLPWWASIVLSTFLFRSVVTLPLTIYQHKITARIEKIALEMPAI 126
Query: 155 -QLLQMKMTQAR------QTGNQIEAAR-YAQEMMLFMKEKGLNPLKNLIVPLAQTPLFI 206
+ L+ + A+ + QI R ++ + +P+K +IV Q PL+I
Sbjct: 127 VEELKKEAAMAKHKFKWSEKQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWI 186
Query: 207 SFFMGLRGM-----------ANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATMWATI 255
+ LR + A MT GG W +LTV D ++LPV A I
Sbjct: 187 FQSVALRNLVYMLPDPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYILPVALGLINLAII 246
Query: 256 EL-GVDGGRLDAQNMQVMRYVLRAIPLVMIPFTINFPGAILVYWCSSNFISLMQVGFLKI 314
E+ + R + + V R + +VM+P P A+ VYW +S+ L Q +
Sbjct: 247 EVQAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNLLILS 306
Query: 315 PAVREYFKIPK 325
P VR IPK
Sbjct: 307 PEVRRSVGIPK 317
>AE014296-1579|AAF50323.1| 351|Drosophila melanogaster CG4942-PA
protein.
Length = 351
Score = 85.8 bits (203), Expect = 9e-17
Identities = 71/251 (28%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 99 PVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVR-VVMFPLVILSQRNSAQMNN---NLPEI 154
PV +Q+ +H +PWW +IVL T + R VV PL I + +A++ +P I
Sbjct: 67 PVAYMQDVLIKIHDYSGLPWWASIVLSTFLFRSVVTLPLTIYQHKITARIEKIALEMPAI 126
Query: 155 -QLLQMKMTQAR------QTGNQIEAAR-YAQEMMLFMKEKGLNPLKNLIVPLAQTPLFI 206
+ L+ + A+ + QI R ++ + +P+K +IV Q PL+I
Sbjct: 127 VEELKKEAAMAKHKFKWSEKQTQIVYRRSIKKQWQNLIVRDNCHPMKTMIVLWGQIPLWI 186
Query: 207 SFFMGLRGM-----------ANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATMWATI 255
+ LR + A MT GG W +LTV D ++LPV A I
Sbjct: 187 FQSVALRNLVYMLPDPTSIQAQIVTTEMTIGGFGWIPNLTVVDNSYILPVALGLINLAII 246
Query: 256 EL-GVDGGRLDAQNMQVMRYVLRAIPLVMIPFTINFPGAILVYWCSSNFISLMQVGFLKI 314
E+ + R + + V R + +VM+P P A+ VYW +S+ L Q +
Sbjct: 247 EVQAMSRTRPSTRLQNIANNVFRGLSVVMVPVACTVPSALCVYWVASSSFGLAQNLLILS 306
Query: 315 PAVREYFKIPK 325
P VR IPK
Sbjct: 307 PEVRRSVGIPK 317
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.323 0.137 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,672,838
Number of Sequences: 52641
Number of extensions: 628671
Number of successful extensions: 1211
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1197
Number of HSP's gapped (non-prelim): 5
length of query: 396
length of database: 24,830,863
effective HSP length: 86
effective length of query: 310
effective length of database: 20,303,737
effective search space: 6294158470
effective search space used: 6294158470
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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