Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001464-TA|BGIBMGA001464-PA|IPR001708|60 kDa inner
membrane insertion protein
(396 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g62050.1 68418.m07788 OXA1 protein (OXA1) identical to AtOXA1... 143 2e-34
At2g46470.1 68415.m05783 OXA1 protein, putative similar to Oxa1 ... 123 2e-28
At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3) ... 59 6e-09
At1g65080.1 68414.m07378 OXA1 family protein contains Pfam PF020... 58 1e-08
At1g24490.1 68414.m03084 60 kDa inner membrane family protein si... 58 1e-08
At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3) ... 53 4e-07
At3g44370.1 68416.m04767 expressed protein weak similarity to At... 37 0.020
At2g46455.1 68415.m05781 cytochrome oxidase biogenesis protein-r... 31 1.0
At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to vil... 31 1.3
At4g27710.1 68417.m03983 cytochrome P450 family protein contains... 30 2.3
At5g57700.2 68418.m07213 BNR/Asp-box repeat family protein conta... 29 4.1
At5g57700.1 68418.m07212 BNR/Asp-box repeat family protein conta... 29 4.1
At4g10770.1 68417.m01757 oligopeptide transporter OPT family pro... 29 5.4
At5g43020.1 68418.m05248 leucine-rich repeat transmembrane prote... 29 7.1
At4g35970.1 68417.m05117 L-ascorbate peroxidase, putative simila... 28 9.4
>At5g62050.1 68418.m07788 OXA1 protein (OXA1) identical to AtOXA1
[Arabidopsis thaliana] GI:6624207
Length = 429
Score = 143 bits (347), Expect = 2e-34
Identities = 80/248 (32%), Positives = 124/248 (50%), Gaps = 5/248 (2%)
Query: 79 QSFAANGEPTFASIGLGGWGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVI 138
Q+ AA E T A+ + P+ +Q C + +H WW +IV+ TI++R PL+I
Sbjct: 115 QAAAAVSEVTLAAAD--SFFPIAALQQCIDMVHTFTGFEWWASIVVATILIRSSTVPLLI 172
Query: 139 LSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMKEKGLNPLKNLIVP 198
+++ ++ P ++ ++ +M + + A ++M KE G+ P +
Sbjct: 173 KQMKDTTKLALMRPRLESIREEMQNKGM--DSVTMAEGQKKMKNLFKEYGVTPFTPMKGM 230
Query: 199 LAQTPLFISFFMGLRGMANCPVESMTHGGLWWFVDLTVPDQYFLLPVITSATMWATIELG 258
Q PLFI FF+ +R MA V S GG WF DLT PD ++LPVIT T T+E
Sbjct: 231 FIQGPLFICFFLAIRNMAE-KVPSFQTGGALWFTDLTTPDSLYILPVITGLTFLITVECN 289
Query: 259 VDGGRLDAQNMQVMRYVLRAIPLVMIPFTINFPGAILVYWCSSNFISLMQVGFLKIPAVR 318
G ++ V R L+ +P T++FP AI YW +SN SLM +K P V+
Sbjct: 290 AQEGMEGNPMAGTVKTVCRVFALLTVPMTMSFPQAIFCYWITSNLFSLMYGLVIKRPQVK 349
Query: 319 EYFKIPKL 326
+ +IP L
Sbjct: 350 KMLRIPDL 357
>At2g46470.1 68415.m05783 OXA1 protein, putative similar to Oxa1
protein [Arabidopsis thaliana] GI:10176922
Length = 431
Score = 123 bits (296), Expect = 2e-28
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 99 PVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQ 158
PV +Q+ + +H + WW +I L T+++R V P+++ + + ++N P+++ L+
Sbjct: 136 PVAALQHLIDAVHSFTGLNWWASIALTTVLIRGVTIPILLNQLKATYKLNVLRPQLEELR 195
Query: 159 MKMTQARQTGNQIEAARYAQEMMLFMKEKGLNPLKNLIVPLAQTPLFISFFMGLRGMANC 218
+M+ Q + A + M L KE G+ P L + Q P+FISFF +R MA
Sbjct: 196 QEMSTKAQDPEAM--AEGQRRMQLLFKEHGVTPFTPLKGLIIQGPIFISFFFAIRNMAE- 252
Query: 219 PVESMTHGGLWWFVDLTVPDQYFLLPVITSATMWATIELGVDGGRLDAQNMQVMRYVLRA 278
V S GG WF DLT D ++LP++T+ T +E + G M+ R
Sbjct: 253 KVPSFKTGGTLWFTDLTTTDTTYILPLLTAVTFLIMVESNMQEGLEGNPVAGTMKKFSRI 312
Query: 279 IPLVMIPFTINFPGAILVYWCSSNFISLMQVGFLKIPAVREYFKIPKLIKHS 330
I + IP I A+ YW +SN +L+ L+ P VR+ +P ++ S
Sbjct: 313 IAFLSIPVLIGIEKALFCYWLTSNLFTLVYGLTLRRPDVRKLLNLPDVVNSS 364
>At2g28800.1 68415.m03501 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 462
Score = 58.8 bits (136), Expect = 6e-09
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 36/220 (16%)
Query: 121 AIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEM 180
AI+L TI+V+ +PL ++ M N P+I+ +Q R GNQ R E
Sbjct: 143 AIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQ-----RYAGNQ---ERIQLET 194
Query: 181 MLFMKEKGLNPLKNLIVPLAQTPLFISFFMGLRGMAN-----------------CPVESM 223
K+ G+NPL + LA P++I + L +AN + +
Sbjct: 195 SRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAAR 254
Query: 224 THG-GLWW---FVDLTVP------DQYFLLPVITSATMWATIELGVDGGRLDAQNMQVMR 273
G G+ W FVD P Y +LPV+ A+ + ++E+ + + D +
Sbjct: 255 QSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEI-MKPPQTDDPAQKNTL 313
Query: 274 YVLRAIPLVMIPFTINFPGAILVYWCSSNFISLMQVGFLK 313
V + +PL++ F ++ P + +YW ++N +S Q +L+
Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLTNNVLSTAQQVYLR 353
>At1g65080.1 68414.m07378 OXA1 family protein contains Pfam PF02096:
60Kd inner membrane protein; similar to AtOXA1
(GI:6624207) [Arabidopsis thaliana]
Length = 525
Score = 57.6 bits (133), Expect = 1e-08
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 14/228 (6%)
Query: 99 PVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQ 158
PV V + E H +PWW I T+ VR+ + PL+IL + ++ LP++ +
Sbjct: 79 PVLAVVDFLEGFHEFTGLPWWMIIASSTVAVRLALLPLLILQLKKLKTISELLPKLPMPI 138
Query: 159 MKMTQARQTGNQIEAARYAQEMMLFMKEKGLNPLKNLIVPLAQTPLFISFFMGLRGMANC 218
+ + G+ + + + +E L L V Q P F +R M+
Sbjct: 139 PETPTLK--GSIDQFSHFLKESRAIGCPSFLWFFPYLSV---QLPCFFLLMASIRKMSLD 193
Query: 219 PVESMTHGGLWWFVDLT-VPDQYF--LLPVITSATMWATIELGVDGGRL---DAQNMQVM 272
GG+ WF +L+ +P F + P++ + + I++ D + +M
Sbjct: 194 GHPGFDSGGVLWFQNLSDLPGGSFGPVFPILIATFHYINIQISFDTSTIRQTTGLTGLLM 253
Query: 273 RYVLRAIPLVMIP-FTINF--PGAILVYWCSSNFISLMQVGFLKIPAV 317
RY + ++ +P F + + P LVYW +++ +++ Q LK P V
Sbjct: 254 RYYKLYLEILSVPLFFVGYAIPQGSLVYWVTNSSVNIFQQLSLKHPTV 301
>At1g24490.1 68414.m03084 60 kDa inner membrane family protein
similar to chloroplast membrane protein (ALBINO3)
(GI:3927828) [Arabidopsis thaliana]
Length = 1013
Score = 57.6 bits (133), Expect = 1e-08
Identities = 77/329 (23%), Positives = 145/329 (44%), Gaps = 45/329 (13%)
Query: 19 CEKVEVRTPRIFYVYSSAGSVRFASTLGSDAGKTLPLADSIXXXXXXXXXTTISDAVSAV 78
C+ ++ R R + SS+ S R+ TL + G D I T AVS+
Sbjct: 536 CKVLQFRRSRFSHTPSSSSS-RYR-TLVAQLGFRPDSFDFIKDHAENLLYTIADAAVSSS 593
Query: 79 QSFAANGEPTFASIGLGGW--GPVGLVQNCFEYLH---VTLDVPW-WG-AIVLGTIVVRV 131
++F + T + W G ++ + L T+ VP+ +G AI+L T++V+
Sbjct: 594 ETFESVAGTTTKTTQSNDWFSGIANYMETILKVLKDGLSTVHVPYSYGFAIILLTVLVKA 653
Query: 132 VMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEMMLFMKEKGLNP 191
FPL ++ M + P+I+ +Q + Q Q+E AR K G+NP
Sbjct: 654 ATFPLTKKQVESAMAMKSLTPQIKAIQERYA-GDQEKIQLETAR-------LYKLAGINP 705
Query: 192 LKNLIVPLAQTPLFISFFMGLRGMAN-----------------CPVESMTHG-GLWW--- 230
L + LA P++I + L +A+ V + +G G+ W
Sbjct: 706 LAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFP 765
Query: 231 FVD----LTVPDQ--YFLLPVITSATMWATIELGVDGGRLDAQNMQVMRYVLRAIPLVMI 284
F++ L PD Y +LP++ + + +I++ + + + M+ + V + +PL++
Sbjct: 766 FIEGHPPLGWPDTLAYLVLPLLLVFSQYLSIQI-MQSSQSNDPAMKSSQAVTKLLPLMIG 824
Query: 285 PFTINFPGAILVYWCSSNFISLMQVGFLK 313
F ++ P + +YW ++N +S Q +L+
Sbjct: 825 YFALSVPSGLSLYWLTNNILSTAQQVWLQ 853
>At2g28800.2 68415.m03502 chloroplast membrane protein (ALBINO3)
Oxa1p homolog {PMID:11148275}; identical to chloroplast
membrane protein ALBINO3 [Arabidopsis thaliana]
GI:2209332
Length = 348
Score = 52.8 bits (121), Expect = 4e-07
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 121 AIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQIEAARYAQEM 180
AI+L TI+V+ +PL ++ M N P+I+ +Q R GNQ R E
Sbjct: 143 AIILLTIIVKAATYPLTKQQVESTLAMQNLQPKIKAIQQ-----RYAGNQ---ERIQLET 194
Query: 181 MLFMKEKGLNPLKNLIVPLAQTPLFISFFMGLRGMAN-----------------CPVESM 223
K+ G+NPL + LA P++I + L +AN + +
Sbjct: 195 SRLYKQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLFTEGFFWIPSLGGPTSIAAR 254
Query: 224 THG-GLWW---FVDLTVP------DQYFLLPVITSATMWATIELGVDGGRLDAQNMQVMR 273
G G+ W FVD P Y +LPV+ A+ + ++E+ + + D +
Sbjct: 255 QSGSGISWLFPFVDGHPPLGWYDTVAYLVLPVLLIASQYVSMEI-MKPPQTDDPAQKNTL 313
Query: 274 YVLRAIPLVMIPFTINFPGAILVYWCSSNFISLM 307
V + +PL++ F ++ P + +YW S + L+
Sbjct: 314 LVFKFLPLMIGYFALSVPSGLSIYWLVSLSLKLL 347
>At3g44370.1 68416.m04767 expressed protein weak similarity to
AtOXA1 [Arabidopsis thaliana] GI:6624207
Length = 338
Score = 37.1 bits (82), Expect = 0.020
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 111 HVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMTQARQTGNQ 170
H +PWW I T+ R + P++IL ++ + +++ LP++ R +Q
Sbjct: 131 HDITGLPWWVVIATSTVAFRTALLPILILQRKQTKRISQFLPKLPHFWPPQGSGRSVLDQ 190
Query: 171 IEAAR 175
++ R
Sbjct: 191 LKLFR 195
>At2g46455.1 68415.m05781 cytochrome oxidase biogenesis
protein-related contains weak similarity to
Swiss-Prot:P39952 cytochrome oxidase biogenesis protein
OXA1, mitochondrial precursor [Saccharomyces cerevisiae]
Length = 129
Score = 31.5 bits (68), Expect = 1.0
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 97 WGPVGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILSQRNSAQM 147
+ P G VQ +H WW +IVL +V V+M P+ + Q + ++
Sbjct: 44 FSPEGFVQYVINGIHELTGFNWWMSIVLTAFLVTVLMSPVSMRVQNLALEL 94
>At3g57410.1 68416.m06391 villin 3 (VLN3) nearly identical to villin
3 (VLN3) [Arabidopsis thaliana] GI:3415117
Length = 965
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 317 VREYFKIPKLIKHSADALPIKKKGFVEGAKDSWTNMKLSKELAERQRIDEMIFTKAGKGP 376
V E+ K IKH+ + F G K ++T+ K+S E + F + GK
Sbjct: 578 VAEFLKPGTTIKHAKEGTESSSFWFALGGKQNFTSKKVSSETVRDPHLFSFSFNR-GKFQ 636
Query: 377 LQKTYKYDPTKL 388
+++ + +D L
Sbjct: 637 VEEIHNFDQDDL 648
>At4g27710.1 68417.m03983 cytochrome P450 family protein contains
Pfam profile: PF00067 cytochrome P450
Length = 518
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 348 SWTNMKLSKELAERQRIDEMIFTKAGKGPLQKTYKYDPTKLTNI 391
+WT M LS ++++ E +F + GK + T + KL N+
Sbjct: 336 TWTTMLLSLHQGWQEKLREEVFNECGKDKIPDTDTFSKLKLMNM 379
>At5g57700.2 68418.m07213 BNR/Asp-box repeat family protein contains
Pfam PF02012: BNR/Asp-box repeat
Length = 347
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 326 LIKHSADALPIKKKGFVEGAKDSWTNMKLSKELAERQRIDEMIFTKAGKGPLQKTYKYDP 385
++ ++ D+ + K G DSWT++ L+ E + +AG G + TY Y+
Sbjct: 250 VLAYNTDSRGVLKLGVSLDDGDSWTDI-LTLEESPGMEYSYPAVIQAGDGNVHVTYTYNR 308
Query: 386 TKLTNIQAKS 395
T++ ++ K+
Sbjct: 309 TQIKHVVLKT 318
>At5g57700.1 68418.m07212 BNR/Asp-box repeat family protein contains
Pfam PF02012: BNR/Asp-box repeat
Length = 352
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 326 LIKHSADALPIKKKGFVEGAKDSWTNMKLSKELAERQRIDEMIFTKAGKGPLQKTYKYDP 385
++ ++ D+ + K G DSWT++ L+ E + +AG G + TY Y+
Sbjct: 255 VLAYNTDSRGVLKLGVSLDDGDSWTDI-LTLEESPGMEYSYPAVIQAGDGNVHVTYTYNR 313
Query: 386 TKLTNIQAKS 395
T++ ++ K+
Sbjct: 314 TQIKHVVLKT 323
>At4g10770.1 68417.m01757 oligopeptide transporter OPT family
protein similar to oligopeptide transporter Opt1p
[Candida albicans] GI:2367386; contains Pfam profile
PF03169: OPT oligopeptide transporter protein
Length = 766
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 100 VGLVQNCFEYLHVTLDVPWWGAIVLGTIVVRVVMFPLVILS 140
VG EY + L +PWWG ++ T+ + + P+ I++
Sbjct: 459 VGATIFACEYYNDQLQLPWWGVLLACTVAI-IFTLPIGIIT 498
>At5g43020.1 68418.m05248 leucine-rich repeat transmembrane protein
kinase, putative
Length = 669
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 118 WWGAIVLGTIVVRVVMFPLVILSQRNSAQMNNNLPEIQLLQMKMT 162
WWG G VVR+V+ L L R N L ++++L +K T
Sbjct: 67 WWGVTCYGNRVVRLVIEDL-YLGGRLIPDSVNKLDQLRVLSLKNT 110
>At4g35970.1 68417.m05117 L-ascorbate peroxidase, putative similar
to ascorbate peroxidase [Gossypium hirsutum]
gi|1019946|gb|AAB52954; identical to putative ascorbate
peroxidase APX5 (AT4g35970) mRNA, partial cds
GI:31980501; contains Pfam domain PF00141: Peroxidase
Length = 279
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 5 LNRPGRRSAVMKL-FCEKVEVRTPRIFY--VYSSAGSVRFASTLG 46
LNRP + + FCE+V+ + PR+ Y +Y AG V T G
Sbjct: 63 LNRPHNKGLEKAVAFCEEVKAKHPRVSYADLYQLAGVVAVEVTGG 107
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.137 0.414
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,237,775
Number of Sequences: 28952
Number of extensions: 318121
Number of successful extensions: 610
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 587
Number of HSP's gapped (non-prelim): 21
length of query: 396
length of database: 12,070,560
effective HSP length: 83
effective length of query: 313
effective length of database: 9,667,544
effective search space: 3025941272
effective search space used: 3025941272
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -