GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001463-TA|BGIBMGA001463-PA|undefined
         (369 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    24   1.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.5  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   4.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   8.1  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   8.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   8.1  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   8.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   8.1  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 34  GLDKRIAAFKRDGFKVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKE 93
           GL   + +F R    V   +  E+V     D     E  NEHL E L   +E+  Q    
Sbjct: 430 GLKTAVGSFSRAMDVVLGTEVREFVVNYIDDLLVASETLNEHL-EHLRQVFEKLKQ--AR 486

Query: 94  KYFKQNMPNLLTWSEKEQIRHLATTQPDEWTPEKLA 129
                   N +   E + + H+ T    +  PEK++
Sbjct: 487 MTINLEKSNFIQ-KEVKFLGHILTINGIKADPEKIS 521


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 308 DNDNKNNLVQYQPKNDSKDVMDYPERIRIPKKAYKKN 344
           + D+ +N+ Q  PKN   +    P  I +P K   +N
Sbjct: 219 EEDDDSNIPQNNPKNKQHNFNLPPGAIPVPDKNRPRN 255


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 164 RNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRN 198
           RN  +  +  L+ +  V+   +KFS+RT+ P  RN
Sbjct: 649 RNGVDTLQQFLTPNMRVQDVTIKFSDRTVRPKQRN 683


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 289 DNAVLESKSVNINKSIEIFDND 310
           +NA +  +S+NI+  IE+ + D
Sbjct: 11  ENAGMPDESINISDVIEVIETD 32


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/11 (81%), Positives = 9/11 (81%)

Query: 51  DEDAEEYVEQS 61
           D DAEEY EQS
Sbjct: 177 DNDAEEYDEQS 187


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query: 241 ENEGEKMEKAPRDYKRVT 258
           +N GEK   APR+  R T
Sbjct: 304 QNPGEKTNIAPRERPRAT 321


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 239 TKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVN 277
           T+E    ++ + P+ +K +T  ELA     +LQ G +++
Sbjct: 317 TREGILSEVLQRPKPFKPITDFELAVPSFLKLQRGSDIS 355


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)

Query: 239 TKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVN 277
           T+E    ++ + P+ +K +T  ELA     +LQ G +++
Sbjct: 317 TREGILSEVLQRPKPFKPITDFELAVPSFLKLQRGSDIS 355


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 16/61 (26%), Positives = 27/61 (44%)

Query: 223 ANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQI 282
           A E+SD +            E EK E+A  ++    +  L ++ +TR  T + +    QI
Sbjct: 141 AIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIERMVQI 200

Query: 283 I 283
           I
Sbjct: 201 I 201


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.131    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,495
Number of Sequences: 317
Number of extensions: 3461
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 9
length of query: 369
length of database: 114,650
effective HSP length: 58
effective length of query: 311
effective length of database: 96,264
effective search space: 29938104
effective search space used: 29938104
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)