Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001463-TA|BGIBMGA001463-PA|undefined
(369 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|ch... 36 0.012
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 32 0.15
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 32 0.15
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 31 0.34
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 30 0.60
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 29 0.79
SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces pom... 28 1.8
SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr... 27 3.2
SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz... 27 3.2
SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomy... 27 3.2
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 3.2
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 4.2
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 4.2
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 27 4.2
SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|ch... 27 5.6
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 27 5.6
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 27 5.6
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 27 5.6
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 7.4
SPBC211.06 |gfh1||gamma tubulin complex subunit Gfh1|Schizosacch... 26 7.4
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 26 7.4
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 26 7.4
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 7.4
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 26 7.4
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 26 7.4
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 26 9.8
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 26 9.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.8
SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex ... 26 9.8
>SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 35.5 bits (78), Expect = 0.012
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 272 TGQNVNVPDQI--IVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMD 329
TG +V +++ + +T D+ V+ +N +E F +D KN+ + + +D+++
Sbjct: 33 TGIEKDVSERLSKLASTSKDSEVVAQGKPLLN-DLEAFKSDIKNDRPLVPLEGEGQDIVE 91
Query: 330 YPERIRIPKKAYKKNATYKVNDCYY 354
Y E ++ A NA + ++CYY
Sbjct: 92 YNEELKQLDNASWGNAPWLYSECYY 116
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 31.9 bits (69), Expect = 0.15
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 59 EQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNLLTWSEKEQIRHLATT 118
E E+D K+ + EHL++ + E++ Q+ KEKY K+N +++ + R L+T
Sbjct: 85 EDEEAD--KIYQSVEEHLSKRRKSQREKQEQLQKEKYEKENPKVSSQFADLK--RGLSTL 140
Query: 119 QPDEW 123
++W
Sbjct: 141 TDEDW 145
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 31.9 bits (69), Expect = 0.15
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 194 PLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAP 251
P+ R + K+ E +I FE +++ A + +Q QD N NEG + ++ P
Sbjct: 51 PIRRRAPKEYVEALERQIAFFEAFVKKLAKVGSDEQSLMIQDMNNKIVNEGNEYDQTP 108
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 30.7 bits (66), Expect = 0.34
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 14/123 (11%)
Query: 219 RRCAANENSDQKTFK-----QDY--NATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQ 271
RR + ENS F DY T ENE + +APR + V ELAQ+ ++
Sbjct: 37 RRSSPVENSPGNGFPVSEDATDYPSGTTSENESLPLNRAPRSLREVA-SELAQEETLPVE 95
Query: 272 TGQ-NVNVPDQII----VNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKD 326
T N++V ++ +N ND + + N + ++ N + QP S D
Sbjct: 96 TSDLNIDVESEVFDLEDINFQNDADDINQRFTYNNHPASVENSLTNVNSIHAQPTTIS-D 154
Query: 327 VMD 329
++D
Sbjct: 155 MID 157
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 29.9 bits (64), Expect = 0.60
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 49 VDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNLLTWSE 108
VD E A Y +++ YK V +++ +G ++ Q ++Y ++N P+ L S+
Sbjct: 1102 VDSETASSYAKKALKKPYKYDPVLDKYPPSRYLGSVSEKFQRAVDEYTQKN-PDKLIASK 1160
Query: 109 KE 110
KE
Sbjct: 1161 KE 1162
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 29.5 bits (63), Expect = 0.79
Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 6/146 (4%)
Query: 183 HFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKEN 242
H +K + + N + K + PEE + +FE + + A E + K YN N
Sbjct: 37 HEVKTEDSRVYYYNSVTRKSVWEKPEELMNDFEKKLSKLAWKEYATADGKKYWYNV---N 93
Query: 243 EGEKMEKAPRDYKRVTLEE-LAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKSVNIN 301
E + P +YK ++E QK + N N P + + S +
Sbjct: 94 TRESVWDIPDEYKAALVDEPEQQKKALSSKIKSNDNKPAVQSIQRHGPDVAAPSSQPAKD 153
Query: 302 KSIEIFDNDNKN--NLVQYQPKNDSK 325
+S +I +K N VQ + K +
Sbjct: 154 QSQQISQGSHKRTINFVQQKDKRQKR 179
>SPCC1919.11 |mug137||BAR adaptor protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 420
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 152 EQRIARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRN-SVKKIDVTPEEK 210
E R ++ + +++KE KE + + ED+R KF E T NR ++K ++ ++
Sbjct: 139 ESRRQAYESLLQKSFKEKKEDS-RLEEDIRLALYKFEESTEQVKNRMIALKDVEADQYQQ 197
Query: 211 IGE 213
+ E
Sbjct: 198 LTE 200
>SPAC15A10.15 |sgo2||shugoshin Sgo2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 201 KKIDVTPEEKIGEFENIIRRCAANENSDQ-----KTFKQDYNATKENEGEKMEKAPRDYK 255
K ID P+EK E+E + + +N+ ++Q +T + + N + E E ++A +
Sbjct: 223 KSIDSAPQEKNHEYEIVSPKSLSNKINNQAAAQRRTEEDNANGVAQEENEGSQEA-HFHS 281
Query: 256 RVTLEELAQKIQTR 269
R+ + + Q T+
Sbjct: 282 RIQSDTVIQSTPTK 295
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/64 (20%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 253 DYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNT--INDNAVLESKSVNINKSIEIFDND 310
D K+ + + + I R+ Q++ + + + N +++N L + ++N+ + +E N+
Sbjct: 12 DLKKKQIRQYKEII--RISKAQSIRIKELQLENERLLSENIDLRTTAINLEEQLETVQNE 69
Query: 311 NKNN 314
N+ N
Sbjct: 70 NEEN 73
>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 504
Score = 27.5 bits (58), Expect = 3.2
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 64 DFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNLLTWSEKEQIRHL 115
DF + + Y HL L E HQI+ YF +N+ + E ++HL
Sbjct: 129 DFVETEDFY--HLVMELAEGGELFHQIVNFTYFSENLARHIIIQVAEAVKHL 178
>SPAC20H4.10 |ufd2||ubiquitin-protein ligase E4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1010
Score = 27.5 bits (58), Expect = 3.2
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 161 SVMRNWKELKEGTLSISED-VRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIR 219
++M++ L +SI ++AH L S+ T P NR + DVTP + + E N
Sbjct: 942 TIMKDPVVLPRSGISIDRSTIKAHLL--SDAT-DPFNRTPLTLDDVTPNDTLREEINTFL 998
Query: 220 RCAANENS 227
+ N++S
Sbjct: 999 KSKRNKHS 1006
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/88 (21%), Positives = 39/88 (44%)
Query: 202 KIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEE 261
++D EE E + I R E + D +E + ++ E D +R+ E
Sbjct: 152 EVDEDEEELEDEEDEIGREDGFIEEEVGADYVGDDRRHRELDRQRQELQSVDAERLAEEY 211
Query: 262 LAQKIQTRLQTGQNVNVPDQIIVNTIND 289
+ +++ G NVP ++++ ++ND
Sbjct: 212 REKYGRSQTVVGDTSNVPQRLLLPSVND 239
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.1 bits (57), Expect = 4.2
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 12/126 (9%)
Query: 224 NENSDQKTFKQDYNATKENEGEKMEKAPRD--YKRVTLEELAQKIQTRLQTGQNVNVPDQ 281
NENSD + QD + + E + + + + E+L + Q + N D
Sbjct: 3972 NENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLLETEQKSNEQSAANNESD- 4030
Query: 282 IIVNTINDNAVLESKSVNINKSIEIFDND-NKNNLVQ-------YQPKNDSKDVMDYPER 333
+V+ +DN LE K + E +D ++ +Q QP +++D +D PE
Sbjct: 4031 -LVSKEDDNKALEDKDRQEKEDEEEMSDDVGIDDEIQPDIQENNSQPPPENEDHLDLPED 4089
Query: 334 IRIPKK 339
+++ +K
Sbjct: 4090 LKLDEK 4095
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 27.1 bits (57), Expect = 4.2
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Query: 167 KELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANEN 226
KE S SED + + + + + P + D + KIG ++ R+ A +
Sbjct: 1432 KESLSKIFSDSEDCNSESIHYVLKLVKPSKFFPLFYSDSEEKGKIGALNDMTRKAAMEQK 1491
Query: 227 SDQKTFKQDYNATK 240
+D +T + YN K
Sbjct: 1492 ADAETLR--YNLAK 1503
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 289 DNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKKAYKKN 344
DN +L S + +IN+ E + ++NK +L+ N KD + + +PK+ + N
Sbjct: 94 DNEILFSSTEDINQHKENYQDENKIDLLDVALAN-PKDCVVPSSGLLMPKEEFISN 148
>SPBC354.09c |||Tre1 family protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 794
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 166 WKELKEG--TLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENII 218
WKE E I+ DV F+ RT+P L + + DV EE + NII
Sbjct: 509 WKESLEAKAVAYINVDVAVSGDTFTARTVPGLKKVIQRAFDVANEEDEMKAANII 563
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.6 bits (56), Expect = 5.6
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 11/126 (8%)
Query: 196 NRNSVKKIDVTPEEKIGE-FENIIRRCAANENSDQK-----TFKQDYNATKENEGEKM-- 247
+R ++ + P++ I E FEN + N +++ T + KE+ +
Sbjct: 626 DRKTISETQPAPKQNINEEFENSTSTDGSETNKNEQGNSLSTPDNEPRLRKESLSSDVLL 685
Query: 248 ---EKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKSVNINKSI 304
EK + + E +QTG +V VPD I V + +N N ++
Sbjct: 686 DGSEKPAQAELTINSENFPVDCSLPVQTGADVVVPDTTDEEVITSEPVKLEQPINENSNV 745
Query: 305 EIFDND 310
E + D
Sbjct: 746 EEAEKD 751
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 26.6 bits (56), Expect = 5.6
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 245 EKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVN--TINDNAVLESKSVNINK 302
E EKAPR Y+R L L ++++ L ++ Q++ N D + KS+ +NK
Sbjct: 488 EVNEKAPRFYRRFILRSLVDRLKS-LYPKLALSQMSQLVKNFYAFEDPLLQIEKSLVLNK 546
Query: 303 SI 304
I
Sbjct: 547 PI 548
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 5.6
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 177 SEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDY 236
SE+ F K+ ++T+ LNR+ + D+ E ++ R C + D KT K++Y
Sbjct: 337 SENDILKFKKYVQQTLKRLNRSVEEITDL-------EIKHFSRNCLNIKVMDFKTMKEEY 389
Query: 237 NATKEN 242
T +
Sbjct: 390 QPTSNS 395
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 7.4
Identities = 14/46 (30%), Positives = 18/46 (39%)
Query: 46 GFKVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQII 91
G D+ D EE V Q D ++ H N T + R Q I
Sbjct: 476 GLDADNVDVEEVVNQRYPDLNELESQLTSHTNITTSSHHNPREQEI 521
>SPBC211.06 |gfh1||gamma tubulin complex subunit
Gfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 287 INDNAVLESKSVNINKSIEIFDND 310
IND L SK I + IEIFD D
Sbjct: 41 INDIVSLASKRKRIERYIEIFDED 64
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 68 VGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPN 102
+G +Y +HL L + +Q ++I + QN PN
Sbjct: 393 IGMLYRKHLQIILQHRQQQLNKIQNARMNSQNAPN 427
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.2 bits (55), Expect = 7.4
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 40 AAFKRDGFKVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKY 95
A +K + K + D V E DF+KV +V NE ++ E + +K+
Sbjct: 529 AEYKGESAKSSESDL--VVSDDEEDFFKVSKVANESISSNHEKLMESESDRLSKKW 582
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 274 QNVNVPDQIIVNTINDNAVLESKSVN-INKSIEIFDNDNKNNLVQYQPKNDSKD 326
Q VP+ + + + D K+ + + + +EI +++ N L++ PK ++D
Sbjct: 28 QQFLVPNNVRLKFLRDRLHKSLKNFDSVKRKVEIANDEGNNKLLKSSPKAQTRD 81
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 188 SERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGE 245
+E+T+ L+ NS+ +ID E E + N+ S T + Y A N+G+
Sbjct: 545 AEQTLIGLSNNSIFRIDPRVEGNKLVAEQFKQYATKNDFSSAATTENGYIAVASNKGD 602
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 26.2 bits (55), Expect = 7.4
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 70 EVYNEHLNE--TLMGKYEQRH----QIIKEKYFKQNMPNLLTWSEKEQIRHLATTQPDEW 123
+++N ++ + TL+GK Q ++ KE F Q+ L E E++RHLAT+ +++
Sbjct: 347 DIHNVNIKQITTLIGKMSQVQIECKRLRKENLFLQSERTHLL-RELEELRHLATSAKEDF 405
Query: 124 TP-EKL 128
EKL
Sbjct: 406 VKVEKL 411
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 250 APRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKS 297
AP DY+ + L + + I +RL +N+N P + ++N ++ ++
Sbjct: 251 APGDYEDLPLSNMRKIIASRLAESKNMN-PHYYVTVSVNMEKIIRLRA 297
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 57 YVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKY 95
+V+ S+ + +V N+ NE LMG +E +I K +Y
Sbjct: 501 FVDSRTSNLLRASQVDNKVENEALMGLFETFVKIKKFEY 539
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.8
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 278 VPDQII--VNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIR 335
V D+I+ + D+ L ++VN N E N + + +P K + DY ++
Sbjct: 37 VEDEIVCLLEKGEDDWYLVKRNVNSNDDDEEIGIVPSNYITEAEPSTKMKALYDYTQQ-S 95
Query: 336 IPKKAYKKNATYKVNDCYYDHDGRFL 361
+ + +++ + T DCY D D ++
Sbjct: 96 VDEISFQADQTL---DCYGDTDSDWI 118
>SPAC17C9.01c |nuc2|apc3, SPAC1851.01|anaphase-promoting complex
subunit Apc3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.8 bits (54), Expect = 9.8
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 47 FKVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNLLTW 106
F V + A Y S S F K + + L G ++RHQ +K + Q NLL +
Sbjct: 210 FSVSESIANSYSNSSISAFTKWFDRVDA---SELPGSEKERHQSLKLQSQSQTSKNLLAF 266
Query: 107 SEKEQ 111
++ ++
Sbjct: 267 NDAQK 271
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,702,922
Number of Sequences: 5004
Number of extensions: 75349
Number of successful extensions: 240
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 224
Number of HSP's gapped (non-prelim): 35
length of query: 369
length of database: 2,362,478
effective HSP length: 74
effective length of query: 295
effective length of database: 1,992,182
effective search space: 587693690
effective search space used: 587693690
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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