Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001463-TA|BGIBMGA001463-PA|undefined
(369 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 33 0.28
SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.86
SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0) 32 0.86
SB_51699| Best HMM Match : SAM_2 (HMM E-Value=1.5) 31 1.5
SB_34410| Best HMM Match : Remorin_C (HMM E-Value=1.5) 31 1.5
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23) 31 1.5
SB_20189| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 31 2.0
SB_52186| Best HMM Match : IMPDH (HMM E-Value=0) 30 2.6
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 30 2.6
SB_20884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_45191| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.5
SB_14909| Best HMM Match : Spb1_C (HMM E-Value=0) 30 3.5
SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24) 29 4.6
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 29 4.6
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.0
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 29 6.0
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 29 8.0
SB_35963| Best HMM Match : Cadherin (HMM E-Value=0) 29 8.0
SB_34907| Best HMM Match : Cadherin (HMM E-Value=0) 29 8.0
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 29 8.0
SB_25767| Best HMM Match : F-box (HMM E-Value=9.7e-09) 29 8.0
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 8.0
SB_4638| Best HMM Match : DUF1283 (HMM E-Value=0.46) 29 8.0
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 39.1 bits (87), Expect = 0.006
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 225 ENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIV 284
E D++ ++ +A K+ E K+E+ + TL++ K++ L+ Q N+ I
Sbjct: 954 EMVDEEQDRKVKDAEKDLEEVKLERRKHQEELETLKDKTLKVERELRDSQQENIKMNI-- 1011
Query: 285 NTINDNAVLESKSVNINKSIEIFDNDNKN 313
+N+ L K ++ S+EIF+ D KN
Sbjct: 1012 ----ENSKLSRKVSSLESSVEIFEKDKKN 1036
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 33.5 bits (73), Expect = 0.28
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 213 EFENIIRRCAA--NENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRL 270
E E II+R + ++N +K + K E E ++ RD K +EEL K+Q R
Sbjct: 68 EKEEIIKRLGSELDDNVQEKERMIEELEAKLQEKELDVQSVRDAKDRNIEELKAKLQERE 127
Query: 271 QTGQNVNVPDQIIVNTIN-DNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMD 329
++ N ++++ + + ES S ++N +++ D +KN +Q Q +
Sbjct: 128 AMLESANEGEELLKSQLEAAKQFYESASRDLNVTLD--DLRSKNEQLQRQLSQKDNQLQS 185
Query: 330 YPERIRIPKKAYK 342
E ++ ++ K
Sbjct: 186 MKEDVKNTEEELK 198
>SB_17147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 31.9 bits (69), Expect = 0.86
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 209 EKIGEFENIIRRCAANEN-SDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQ 267
+K G F + +R+ + ++Q+ ++ + K+ +G + EK R+ E +A K +
Sbjct: 101 KKKGLFSSFLRKGKKKDKKAEQEAVLKEKDVAKKEDGGEAEKVARNK-----ENIATKKE 155
Query: 268 TRLQTGQNVNVPDQIIVNTINDNAVLESKSVNINKSIEIFDND 310
+TG+ V+ ++ V+ V K V++ + +E+ +ND
Sbjct: 156 GDKETGKEVSKLEEGPVSAEKIEEVGLEKEVDLEEDVEMKEND 198
>SB_227| Best HMM Match : E1-E2_ATPase (HMM E-Value=0)
Length = 1003
Score = 31.9 bits (69), Expect = 0.86
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 4/38 (10%)
Query: 240 KENEGEKMEKAPR----DYKRVTLEELAQKIQTRLQTG 273
K+++ EKME+ + D+ R+T+EEL ++ T +QTG
Sbjct: 64 KKDQKEKMEELKQELDVDWHRITVEELMTRLDTNVQTG 101
>SB_51699| Best HMM Match : SAM_2 (HMM E-Value=1.5)
Length = 442
Score = 31.1 bits (67), Expect = 1.5
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 15/177 (8%)
Query: 159 DQSVMRNWKELKEGT-LSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENI 217
D+ MR + +G LS E + H + S TI R + +T E E +
Sbjct: 191 DKDYMRVCRFFHDGVNLSRIEHMDTHNVYASRATI----REYLYDHTLTTEPSSPESPSF 246
Query: 218 IRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVN 277
+ R E S K ++ +++ +K DY ++ EL +RL +N N
Sbjct: 247 LSR--EPEESGGKVLSGSHDDEDDDDDDK-----HDYTYISDRELTPLASSRLDKNEN-N 298
Query: 278 VP-DQIIVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQ-YQPKNDSKDVMDYPE 332
+P D I ++D+A ++S ++ S E N +++ + + K DV P+
Sbjct: 299 LPSDNIETQGVSDDAHMKSSEESMQGSSENMRNTGDSSITETEEQKKVGADVQAIPD 355
>SB_34410| Best HMM Match : Remorin_C (HMM E-Value=1.5)
Length = 303
Score = 31.1 bits (67), Expect = 1.5
Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 5/154 (3%)
Query: 170 KEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQ 229
K L +S DV A LK + R++ R+S K VTPE + F + A + D
Sbjct: 34 KVAPLGVS-DVDAELLK-TARSLISAQRSSAKN-GVTPE--MSAFVSKCNAAAYDLIIDG 88
Query: 230 KTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTIND 289
K +A K+E AP + LEE AQ R++ + + + +
Sbjct: 89 KQTADGGHAKVPRRLAKIEAAPTFTMEMLLEEQAQVESNRIRQLEKIKKTASSSTRSSDA 148
Query: 290 NAVLESKSVNINKSIEIFDNDNKNNLVQYQPKND 323
NA +S + +++E+ D K + D
Sbjct: 149 NARRAVRSNKLREALEMADKLAKEKSARASENRD 182
>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
Length = 1178
Score = 31.1 bits (67), Expect = 1.5
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 185 LKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEG 244
+K ER I + R S + +++I E ++++ + N D + D A E E
Sbjct: 218 IKKHERKISSMTRES-STLKEQKDKQINELKSLVEQSGENAQHDYEKKLNDKIAEFEQEK 276
Query: 245 EKMEKAPRDYKRVTLEELAQKIQTRLQTGQN 275
+M+K + + L+E Q++Q +++T N
Sbjct: 277 FEMQKQHTNNIQELLDETNQRLQ-KMETEYN 306
>SB_20189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 30.7 bits (66), Expect = 2.0
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 219 RRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNV 278
+ CA+N +D +KQ NAT + + KA + + LE I ++++ G+N++
Sbjct: 132 KACASNYQADWSAYKQQRNAT----FQLIRKAKGSFFQEALETSMSSI-SKVKVGENISQ 186
Query: 279 PDQIIVNTIND 289
I N N+
Sbjct: 187 NPTEIANAFNE 197
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 213 EFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQT 268
E ++ ++ +D + +D A+ ENE EK+++ + K +E+L ++++T
Sbjct: 388 ELDSTVKNLQDRYQNDLEDILRDVQASHENELEKLKRGCEEEKDSEIEQLREELRT 443
>SB_52186| Best HMM Match : IMPDH (HMM E-Value=0)
Length = 876
Score = 30.3 bits (65), Expect = 2.6
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 234 QDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVL 293
QD + E +GE+++K D K L E +K R + Q + D ++ NTI +
Sbjct: 31 QDLSEWPELDGERLQK---DQKPQILNE-PRKTLPRTPSDQEI---DTLVTNTIKQAEIT 83
Query: 294 ESKSVNINKSIEI---FDNDNKNNLVQYQPKNDSKDVM 328
K +NI+ +I + + NN V+ ND ++
Sbjct: 84 IKKDINIDNQDDIPRSNEAGSGNNKVEPPKDNDGGSIV 121
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 240 KENEGEKMEKAPRD-YKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKSV 298
++N K A D K E+A + +T ++ V ++ + ++++ E+K+V
Sbjct: 1239 RDNHNLKQRLADSDGQKEAAKREIANLSRKMAETEEDNRVREKDLTTALDESRRAEAKAV 1298
Query: 299 NINKSIE-IFDNDNKNN 314
+ K++E I DN N++N
Sbjct: 1299 DKVKNLENILDNANQDN 1315
>SB_20884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 30.3 bits (65), Expect = 2.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 233 KQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQ 271
++D+NA EN + ++ KR LE LA+K+Q +L+
Sbjct: 226 QKDWNALAENNFLYVRAIVKELKRRELESLARKLQAKLE 264
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 30.3 bits (65), Expect = 2.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 279 PDQI-IVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDV 327
PD + N+ D+ V+ K N ++S +++KNN + QP ND +
Sbjct: 49 PDLVEYTNSETDDDVILEKKFNTSESAASLTSEDKNNTLPGQPGNDGDSI 98
>SB_45191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 29.9 bits (64), Expect = 3.5
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 225 ENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIV 284
+NSD + N T G K + YK+ TLE A++ + R +NV+VP ++
Sbjct: 371 DNSDTLSPLSYMNGTT---GSPTIKILKKYKKKTLEVRAKEAKIRTTKSKNVSVPAIEVL 427
Query: 285 NTINDN 290
+N+N
Sbjct: 428 ILVNNN 433
>SB_41436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 288 NDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKKAYKKNATY 347
N N ++ + + N N I +N+N NN++ ++SK+ + KAY+K+ Y
Sbjct: 12 NSNTIINNNNNNHNNGHNITNNNNNNNIIINNNNDNSKNNIK-------KHKAYQKHGHY 64
Query: 348 KVN 350
+ N
Sbjct: 65 QNN 67
>SB_14909| Best HMM Match : Spb1_C (HMM E-Value=0)
Length = 437
Score = 29.9 bits (64), Expect = 3.5
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 204 DVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYK 255
DVT +EK+ + +N+ ++ + N+ + K Y TK+++ K K P K
Sbjct: 360 DVTAQEKMKQIQNLYKKASINKKKEIK-----YVVTKKHQSAKRMKRPAGVK 406
>SB_21535| Best HMM Match : Band_41 (HMM E-Value=3.7e-24)
Length = 2278
Score = 29.5 bits (63), Expect = 4.6
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 195 LNRNSVKKIDVTPEEKIGEFE-NIIRRCAANENS---DQKTFKQDYNATKENEGEKMEKA 250
+ + S+ ++D +E + + +RR AA+ NS D + + Y + + NEGEK+ +
Sbjct: 312 ITKESILRVDEKTKEVMKTWPLTTVRRWAASPNSFTLDFGDYTESYYSVQTNEGEKISQL 371
Query: 251 PRDYKRVTLEE 261
Y + L++
Sbjct: 372 IAGYIDIILKK 382
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 29.5 bits (63), Expect = 4.6
Identities = 37/228 (16%), Positives = 89/228 (39%), Gaps = 7/228 (3%)
Query: 48 KVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNLLTWS 107
K++D E E E ++GE+ E + E L +++ IK+K+ + W
Sbjct: 832 KMEDLMESEITELREKHQQELGEM-EERMKE-LQKQHDAEQASIKKKWADELASQQNKWQ 889
Query: 108 EKEQIRHLATTQPDEWTPEKLAESFXXXXXXXXXXXXXXXXXATEQRIARHDQSVMRNWK 167
++ ++ EK S+ T+ + A+++ + +
Sbjct: 890 DRVRVLE-KEADGQRKVHEKQQNSYEKRNEGLEKKLMDEANERTKIK-AKYNDEIQTLIE 947
Query: 168 ELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENS 227
E +E ++ R + +N + + ++ ++++ +N I R
Sbjct: 948 EQRELVRKYESQIKTVVEDSKTRILKLINDH--ENVETDYKKQLKALKNEILRVEDEHEV 1005
Query: 228 DQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQN 275
+ + K D+ ENE ++EK+ R +R ++ K +L++ ++
Sbjct: 1006 EIRQLKSDFRERSENERTELEKSFRQ-ERTKMKNSHDKEMVQLESRED 1052
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 259 LEELAQKIQTRLQTGQNVNVPDQIIVNTINDN 290
LEEL +I LQT Q + D+ +VNT+N +
Sbjct: 2885 LEELEDEILRLLQTAQGSLLDDEQLVNTLNSS 2916
>SB_32454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1161
Score = 29.1 bits (62), Expect = 6.0
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 158 HDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNR--NSVKKIDVTPEEKIGEFE 215
+DQ K+LK+ LS+ + V + +E+ L+ NS K+++ T EE
Sbjct: 479 NDQVDSMEVKKLKDELLSMKQKVMEFDAQMTEQD-KELHEALNSRKELETTVEEM----- 532
Query: 216 NIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYK 255
N+ R +N K K+D + GEK+ ++ K
Sbjct: 533 NVKIRSIERDNRGLKVEKEDLERVLQEAGEKVASQQKELK 572
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 200 VKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEK 249
VKK +V K+ + + R + S+ K+ YN+ ++NEG+ EK
Sbjct: 486 VKKPNVNCTGKLDDDFTVARIYVSKIKSEVKSLHNRYNSAEQNEGQLKEK 535
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 28.7 bits (61), Expect = 8.0
Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 243 EGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKSVNINK 302
E E +E+ +D ++V + EL K++ + G + + N I + LE + + K
Sbjct: 381 EKEGLERKLKDEQKV-VSELKIKLERFSEDGTELEEKIRSQRNRITE---LERRVKELEK 436
Query: 303 SIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKKAYKKN 344
+ + K ++ + +D K + D E++R+ +K K+N
Sbjct: 437 EKNLLEQQVKT--MKNKSDDDDKKIKDLNEKVRVLEKQLKEN 476
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 208 EEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQ 267
+EK + A +++ +++Y+A + + EK++K K +E+L QK Q
Sbjct: 340 DEKEQSLRKLRESLAREHEKEKRKIEEEYHAALDEQREKLDKE----KDAEIEKLQQKNQ 395
Query: 268 TRLQ 271
LQ
Sbjct: 396 YELQ 399
>SB_35963| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 864
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 266 IQTRLQ-TGQNVNVPDQIIVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPK 321
+QT+L+ G ++V + N + S ++N IE+ D D+ NN + P+
Sbjct: 423 LQTQLEYKGNPAQDVIDLVVTATDRNGQSGALSASVNLKIEVLDVDDNNNAPVFNPQ 479
>SB_34907| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 697
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 266 IQTRLQ-TGQNVNVPDQIIVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPK 321
+QT+L+ G ++V + N + S ++N IE+ D D+ NN + P+
Sbjct: 419 LQTQLEYKGNPAQDVIDLVVTATDRNGQSGALSASVNLKIEVLDVDDNNNAPVFNPQ 475
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 225 ENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIV 284
E + T + N ++GE + +P+DY+ VT + Q T + + PDQI +
Sbjct: 931 ETGNSFTQTSENNQISRSDGETADNSPQDYESVTNGSVTQLPSTHV-----IITPDQIEL 985
Query: 285 NTINDNAVLESKSVNINKSI 304
N + + N+ I
Sbjct: 986 TGNNTATYMNTPGQATNEDI 1005
>SB_25767| Best HMM Match : F-box (HMM E-Value=9.7e-09)
Length = 250
Score = 28.7 bits (61), Expect = 8.0
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 50 DDEDAEEYVEQSESDFYKVGEVYNEHLNETL 80
DD+D +EY + +ESD G +N H + L
Sbjct: 155 DDDDDDEYSDSTESDTESEGGNFNNHNDNKL 185
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 260 EELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKSVNINKSIEI 306
EE+ +I+ L+ Q + + + N I DNA+L+ N +KS EI
Sbjct: 1242 EEMENQIREELEVKQENKLLQEQVENLIKDNALLQKD--NTDKSTEI 1286
>SB_4638| Best HMM Match : DUF1283 (HMM E-Value=0.46)
Length = 986
Score = 28.7 bits (61), Expect = 8.0
Identities = 26/102 (25%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Query: 224 NENSDQKTFKQDYNAT-KENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQI 282
N NSDQ + Q +N T K N K E A D + +++ T T N NV D+
Sbjct: 52 NANSDQ-NYHQKFNKTEKINSTTKSENASNDISNSSNVDMS-SAYTNPNTSLNPNVLDRK 109
Query: 283 IVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDS 324
+ + E + + + D K N ++ KN++
Sbjct: 110 RFSKKAKLVMEEDAGLGEQHNTSEANYDEKRNQTTWEMKNEN 151
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,950,929
Number of Sequences: 59808
Number of extensions: 504178
Number of successful extensions: 1417
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1399
Number of HSP's gapped (non-prelim): 39
length of query: 369
length of database: 16,821,457
effective HSP length: 83
effective length of query: 286
effective length of database: 11,857,393
effective search space: 3391214398
effective search space used: 3391214398
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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