GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001463-TA|BGIBMGA001463-PA|undefined
         (369 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.3  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.3  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    25   4.4  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   4.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   7.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 285 NTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKK 339
           N  ++N+   + S + N +  I  N+N NN + + P  D K++ ++ +  R+ ++
Sbjct: 194 NASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRD-KELTEHEQLERLQQQ 247


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 285 NTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKK 339
           N  ++N+   + S + N +  I  N+N NN + + P  D K++ ++ +  R+ ++
Sbjct: 194 NASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRD-KELTEHEQLERLQQQ 247


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 285 NTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKK 339
           N  ++N+   + S + N +  I  N+N NN + + P  D K++ ++ +  R+ ++
Sbjct: 146 NASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRD-KELTEHEQLERLQQQ 199


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 224 NENSDQKTFKQD-YN------ATKENEGEKMEKAPRDYKRVTLEE 261
           N+N D  +   D YN      A K++  E +EK  RDY    LE+
Sbjct: 66  NDNFDTSSIHSDRYNGEAGGRAKKQSFSEALEKIERDYDNSRLEQ 110


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 285 NTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKK 339
           N  ++N+   + S   N +  I  N+N NN + + P  D K++ ++ +  R+ ++
Sbjct: 194 NASSNNSNNNNNSSGNNNNNTISSNNNNNNSLHHGPLRD-KELTEHEQLERLQQQ 247


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 197 RNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKR 256
           RN V   +   ++ + + E + R+ +      QKT +++  +  + E E  EK   D KR
Sbjct: 863 RNEVVATEKRIKKVLTDTEEVDRKLS-EALKQQKTLQKELESWIQKEKEAQEKLEEDGKR 921

Query: 257 V 257
           +
Sbjct: 922 M 922


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.131    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,984
Number of Sequences: 2123
Number of extensions: 14201
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 6
length of query: 369
length of database: 516,269
effective HSP length: 65
effective length of query: 304
effective length of database: 378,274
effective search space: 114995296
effective search space used: 114995296
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 49 (23.8 bits)