Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001463-TA|BGIBMGA001463-PA|undefined
(369 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 36 0.057
At5g40430.1 68418.m04903 myb family transcription factor (MYB22)... 33 0.30
At2g36370.1 68415.m04463 F-box family protein (FBL11) contains s... 33 0.30
At1g33680.1 68414.m04166 KH domain-containing protein similar to... 33 0.40
At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to ... 31 1.2
At5g40450.1 68418.m04905 expressed protein 31 1.6
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 31 1.6
At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative non-co... 31 1.6
At2g22795.1 68415.m02704 expressed protein 31 1.6
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 30 2.1
At5g51850.1 68418.m06428 expressed protein similar to unknown pr... 29 3.8
At1g19525.1 68414.m02432 pentatricopeptide (PPR) repeat-containi... 29 3.8
At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor, pu... 29 3.8
At1g72440.1 68414.m08377 CCAAT-box-binding transcription factor-... 29 6.6
At1g48190.1 68414.m05379 hypothetical protein 29 6.6
At5g49760.1 68418.m06163 leucine-rich repeat family protein / pr... 28 8.7
At4g36590.1 68417.m05194 MADS-box protein (AGL40) contains Pfam ... 28 8.7
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 28 8.7
At3g20150.1 68416.m02554 kinesin motor family protein contains P... 28 8.7
At1g75990.1 68414.m08824 26S proteasome regulatory subunit S3, p... 28 8.7
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 28 8.7
At1g18370.1 68414.m02295 kinesin motor family protein (NACK1) si... 28 8.7
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 35.5 bits (78), Expect = 0.057
Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 5/148 (3%)
Query: 201 KKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLE 260
KK + T E+K E ++ E+ D K+ K++ + ++ + E+ + ++ + +E
Sbjct: 1062 KKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDME 1121
Query: 261 ELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKSVNINKS--IEIFDNDNKNNLVQY 318
+L + + + +N Q V + + + K N KS EI + ++ N V
Sbjct: 1122 KLEDQNSNKKKEDKNEKKKSQ-HVKLVKKESDKKEKKENEEKSETKEIESSKSQKNEVDK 1180
Query: 319 QPKNDSKDVMDYPER--IRIPKKAYKKN 344
+ K SKD E+ +K KKN
Sbjct: 1181 KEKKSSKDQQKKKEKEMKESEEKKLKKN 1208
Score = 30.7 bits (66), Expect = 1.6
Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 11/175 (6%)
Query: 156 ARHDQSVMRNWKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVK-KIDVTPEEKIGEF 214
A ++S+ + +E++ S +++VR F + + + SVK K D E E
Sbjct: 871 ANKEESMKKKREEVQRNDKSSTKEVR-DFANNMDIDVQKGSGESVKYKKDEKKEGNKEEN 929
Query: 215 ENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQ 274
++ I + + D+K K KE++ M+K D K EL ++ + +T +
Sbjct: 930 KDTINTSSKQKGKDKKKKK------KESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTK 983
Query: 275 NVNVPDQIIVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMD 329
+ N + DN + + +K+ E + + K + + + K + K D
Sbjct: 984 SEN---SKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQD 1035
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/96 (19%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Query: 225 ENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQT-GQNVNVPDQII 283
EN + K ++ E + ++ ++ KR + + + T G+NVN+ + I
Sbjct: 449 ENLENKVGNEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQGESI 508
Query: 284 VNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQ 319
++ DN+ LE+K ++ ++ ++D + ++Q
Sbjct: 509 GDSTKDNS-LENKE-DVKPKVDANESDGNSTKERHQ 542
>At5g40430.1 68418.m04903 myb family transcription factor (MYB22)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 256
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 70 EVYNEHLNETLMGKYEQRHQIIKEKYFKQNMPNLLTWSEKEQI--RHLATTQPDEWTPEK 127
E+ N+ ++ + YE + + KY K++ W+E E I + + +P +WT K
Sbjct: 21 EIMNQLEDDKMKKTYENKKEASTSKYLKKSDITKKRWTESEDIKLKEMVALEPKKWT--K 78
Query: 128 LAESF 132
+A+ F
Sbjct: 79 VAKHF 83
>At2g36370.1 68415.m04463 F-box family protein (FBL11) contains
similarity to leucine-rich repeats containing F-box
protein FBL3 GI:5919219 from [Homo sapiens]
Length = 785
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 166 WKELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIR 219
W++ E L +D H + S RT+P L+ SVK+ID++ +++ +++ +I+
Sbjct: 300 WRKSLESFLKNPDDDERHQEQISHRTLPILSFESVKEIDISKCQRL-DYKVVIK 352
>At1g33680.1 68414.m04166 KH domain-containing protein similar to
FUSE binding protein 2 GB:AAC50892 GI:1575607 from [Homo
sapiens]
Length = 759
Score = 32.7 bits (71), Expect = 0.40
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 225 ENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIV 284
E+ ++ T K + + +G + + ++ + EE K++ + N V +++
Sbjct: 80 ESKEEGTEKPIAQSDENQDGNPLIEKVQE--TIDAEESDNKMEDNGKPEDNQLVTPEVV- 136
Query: 285 NTINDNAVLESKSVNINKSIEIFDNDNK--NNLV-QYQPKNDSKDVMD 329
T D +V ESK VNI+ S ++D+K N++V Q + +N SK+V D
Sbjct: 137 -TSQDVSVEESKEVNISGSQNEGEDDSKETNDVVAQKEVENGSKEVTD 183
>At1g06670.1 68414.m00707 DEIH-box RNA/DNA helicase identical to
DEIH-box RNA/DNA helicase GB:BAA84364 GI:5881579
[Arabidopsis thaliana]
Length = 1576
Score = 31.1 bits (67), Expect = 1.2
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 15/182 (8%)
Query: 170 KEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQ 229
K G ++ E + ++F +E+ P N + V+ + ++K + E+ +RC + N
Sbjct: 1171 KLGLGNMEESLPSNFADGNEQPDP--NTSPVEDVSAATKQKKMQSES--KRCKSLNN--- 1223
Query: 230 KTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTG-QNVNVPDQIIVNTIN 288
D +EN G E P D + E+ K+ + L G N P + N
Sbjct: 1224 ----VDLGNIEENFGNMEENPPSDL-AIGNEQTLPKLASNLDMGNMEENTPSD-LANGNE 1277
Query: 289 DNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKKAYKKNATYK 348
+ S+++ E +D N + +PK+ SK + E++ IP N +
Sbjct: 1278 KTEPNSANSMDLGNMEENTPSDLANGNKKKEPKSVSKLDLG-SEKVSIPSNLVNGNEQHD 1336
Query: 349 VN 350
+N
Sbjct: 1337 LN 1338
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 239 TKENEGEKMEKAPR--DYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESK 296
+KE EGE + +A + K E+ A+KIQ L+T Q V P ++ ++ + V ++
Sbjct: 1025 SKELEGETVVEAENIENIKENEEEQAAEKIQKSLETVQTVESPSSLLFSSEEQDHVTVAE 1084
Query: 297 SVNINKSIE 305
+ K+ E
Sbjct: 1085 EIVDEKAKE 1093
Score = 29.5 bits (63), Expect = 3.8
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 196 NRNSVKKIDVTPEEKIGEFENIIRRCAANENSD-----QKTFKQDYN-ATKENE--GEKM 247
N + + EEK+GE + + E SD + T K D A EN+ E+
Sbjct: 2142 NTQEERHVSAETEEKVGETKPKESQAEGAEKSDDQVEDESTKKTDVEVAGLENDYPTEEA 2201
Query: 248 EKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESK 296
E Y + + + ++QT L+T + +N V+ I + A E K
Sbjct: 2202 EHGDETYSTLPVVGILTQLQTTLETERAINDSASSEVSMIKEPADQEEK 2250
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 30.7 bits (66), Expect = 1.6
Identities = 29/148 (19%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 152 EQRIARHDQSVMRNWKELKE---GTLSISEDVRAHFLKFSERTIPP---LNRNSVKKIDV 205
E+++ +++ + +E+KE + SE+ K E P V+ ++
Sbjct: 271 EEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEE 330
Query: 206 TPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKME-KAPRDYKRVTLEELAQ 264
T +EK E + + E +++ K+D K E EK + K + ++V EE A+
Sbjct: 331 TTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEESAE 390
Query: 265 KIQTRLQTG--QNVNVPDQIIVNTINDN 290
+ + G ++ + + +I + + +N
Sbjct: 391 GKKKEVVKGKKESPSAYNDVIASKMQEN 418
>At3g18600.1 68416.m02364 DEAD/DEAH box helicase, putative
non-consensus acceptor splice site AT at exon 2; similar
to DEAD box helicase protein GB:NP_006764 from [Homo
sapiens], contains Pfam profile: PF00270 DEAD/DEAH box
helicase
Length = 568
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Query: 208 EEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRV--TLEELAQK 265
+ + E + +R+ + + ++Q+ ++ + +EN E +K+ + K+V +EE +K
Sbjct: 6 KSSVEELKKRVRKRSRGKKNEQQKAEEKTHTVEENADETQKKSEKKVKKVRGKIEEEEEK 65
Query: 266 IQTRLQTGQNVNVPDQIIVNTINDNAVLESKSVNINKSIEI----FDNDNKNNLVQYQPK 321
++ N+ I+ I N +S ++ SI I F + QP
Sbjct: 66 VEAMEDGEDEKNI--VIVGKGIMTNVTFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPL 123
Query: 322 NDSKDVM 328
+ KDV+
Sbjct: 124 LEGKDVL 130
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/137 (19%), Positives = 61/137 (44%), Gaps = 12/137 (8%)
Query: 200 VKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTL 259
++K + P+E+ E EN + E++ Q+ K+ TKE E ++
Sbjct: 585 IEKEESAPQEETKEKEN--EKIEKEESASQEETKEKETETKEKEESSSNESQ-------- 634
Query: 260 EELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQY- 318
E + + + + Q +N D+ + +N+V +++ ++ E + NKN +
Sbjct: 635 ENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEK-EESNKNGETEVT 693
Query: 319 QPKNDSKDVMDYPERIR 335
Q ++DS + P+ ++
Sbjct: 694 QEQSDSSSDTNLPQEVK 710
>At1g58230.1 68414.m06618 WD-40 repeat family protein /
beige-related contains Pfam PF00400: WD domain, G-beta
repeat; similar to Lipopolysaccharide-responsive and
beige-like anchor protein (CDC4-like protein)
(Beige-like protein) (SP:P50851) [Homo sapiens}
Length = 1280
Score = 30.3 bits (65), Expect = 2.1
Identities = 42/203 (20%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 168 ELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGE------FENIIRRC 221
E K G + I E ++ LK R +S + E+ + F ++R
Sbjct: 360 ESKSGVIHIPEQMKKFLLKGIRRITDEGGSDSCENDSSQAEQSFMDTSADIQFSELVRTS 419
Query: 222 AANENSDQKTFKQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNV-NVPD 280
+ ++ Q K D ++ + E + P L +K+ L +NV +
Sbjct: 420 SGLKDVVQD--KVDASSLEVGTSEVLTSVP-----CVLVTPKRKLAGWLAVMKNVLHFSG 472
Query: 281 QIIVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYP--ERIRIPK 338
+ +V +AV K+ + +K ++ +NK NLV++ DS+ +D + + P
Sbjct: 473 EFLVEGTGGSAVF--KNFSTSKGSDVTKAENKQNLVKWSSPYDSETFLDLESGNKNKKPL 530
Query: 339 KAYKKNATYKVNDCYYDHDGRFL 361
K K++ +K+ H R+L
Sbjct: 531 KKVKRHRRWKIGKVKSVHWTRYL 553
>At5g51850.1 68418.m06428 expressed protein similar to unknown
protein (emb|CAB81354.1)
Length = 590
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/44 (20%), Positives = 27/44 (61%)
Query: 233 KQDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNV 276
++++ ++ E ++ +PRDY R ++++ +++ TR G ++
Sbjct: 192 EKEFGRSRLKEDQEESHSPRDYARQIVKQIKERVVTRRVVGMDI 235
>At1g19525.1 68414.m02432 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 316
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 27 DSFGPNPGLDKRIAAFKRDGFKVDDEDAEEYVE 59
D GPN DK I+A KR GF+ D +Y+E
Sbjct: 252 DQMGPNE-FDKVISALKRGGFEKDARRMYKYME 283
>At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor,
putative (AVDE1) similar to EST gb|N37612
Length = 462
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 30 GPNPGLDKRIAAFKRDGFKVDDEDAEEYVEQSESDFYKVG 69
GP P L +RI +G ++ ++ EE E+ E + KVG
Sbjct: 363 GPEPALVERIEKTVEEGERIIVKEVEEIEEEVEKEVEKVG 402
>At1g72440.1 68414.m08377 CCAAT-box-binding transcription
factor-related similar to CCAAT-box-binding
transcription factor (CCAAT-binding factor) (CBF)
(Swiss-Prot:Q03701) [Homo sapiens], GB:P53569 [Mus
musculus]
Length = 1056
Score = 28.7 bits (61), Expect = 6.6
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 193 PPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEGEKMEKAPR 252
PPL + V++ V EE I FE++I ++ K + D N E + + +EK+ R
Sbjct: 628 PPLWKMVVQRESVEEEEDIEHFEDVIE---GDDVDPNKKAENDENVV-EVDHDGVEKSSR 683
Query: 253 DYKRVTLEELAQKIQTRLQTGQNVNVPD 280
D + +E A I RL ++ N D
Sbjct: 684 DGDSSSDDEEALAI--RLSDEEDDNASD 709
>At1g48190.1 68414.m05379 hypothetical protein
Length = 127
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 269 RLQTGQNVNVPDQIIVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDS 324
+ T +V P +I N +V E KS+ + +F D+ + V Y PK D+
Sbjct: 28 KTHTWSSVTSPSAVIRN----ESVAEHKSLGLGGKFYLFGYDSDKSAVVYNPKEDN 79
>At5g49760.1 68418.m06163 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 953
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 167 KELKEGTLSISEDVRAHFLKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANEN 226
+EL + T+ S F K+ + + + V + + E + E ENI++ N N
Sbjct: 856 QELLDTTIIASSGNLKGFEKYVDLALRCVEEEGVNRPSMG--EVVKEIENIMQLAGLNPN 913
Query: 227 SDQKTFKQDYNATKENEGE 245
SD T + Y + G+
Sbjct: 914 SDSATSSRTYEDAIKGSGD 932
>At4g36590.1 68417.m05194 MADS-box protein (AGL40) contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain)
Length = 248
Score = 28.3 bits (60), Expect = 8.7
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 198 NSVKKIDVTPEEKIGEFENIIRRCAAN-ENSDQKTFKQD-YNATKENEGEKMEKAPRDYK 255
N+++ ++ P+ I NI+ AN E QK D ++E G EK D K
Sbjct: 89 NNLQLVETRPDRNIQYLNNILTEVLANQEKEKQKRMVLDLLKESREQVGNWYEK---DVK 145
Query: 256 RVTLEELAQKIQTRLQTGQN-VNVPDQIIVNTINDNAVLESKSV--NINKSIEIFDNDNK 312
+ + E Q I + V Q ++ N +S V N I++F D +
Sbjct: 146 DLDMNETNQLISALQDVKKKLVREMSQYSQVNVSQNYFGQSSGVIGGGNVGIDLF--DQR 203
Query: 313 NNLVQYQP 320
N Y P
Sbjct: 204 RNAFNYNP 211
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 234 QDYNATKENEGEKMEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAVL 293
++Y TKE E +K + ++ +E Q ++ + +T N+ ++ N+N V
Sbjct: 318 EEYKRTKEEEALSQKKEEEELLKLHKQEALQMLKKKEKT-DNLIKKEKATKKKKNEN-VD 375
Query: 294 ESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDV 327
+K S +F D + L + +P ++ V
Sbjct: 376 PNKPKKPASSYFLFSKDERKKLTEERPGTNNATV 409
>At3g20150.1 68416.m02554 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1114
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 39 IAAFKRDGFKVDDEDAEEYVEQSESDFYKVGEVYNEHLNETLMGKYEQRHQIIKEKYFKQ 98
+ AF DDE E VE E+DF GE EH + + K ++ +I E++ +
Sbjct: 554 VTAFGESELMDDDEICSEEVEVEENDF---GESLEEHDSAATVCKSSEKSRI--EEFVSE 608
Query: 99 N 99
N
Sbjct: 609 N 609
>At1g75990.1 68414.m08824 26S proteasome regulatory subunit S3,
putative (RPN3) similar to 26S proteasome regulatory
subunit S3 SP:P93768 [Nicotiana tabacum (Common
tobacco)]
Length = 487
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 254 YKRVTLEELAQKIQTRLQTGQNVNVPDQIIVNTINDNAV 292
Y R++L+++AQK+ RL + V + I+ I D A+
Sbjct: 366 YSRISLQDVAQKL--RLNSANPVADAESIVAKAIRDGAI 402
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 28.3 bits (60), Expect = 8.7
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 10/124 (8%)
Query: 224 NENSDQKTFKQDYNATKENEGEK-MEKAPRDYKRVTLEELAQKIQTRLQTGQNVNVPDQI 282
N +D+K + ++ +E E+ +Y + T E K + N N D
Sbjct: 104 NNKNDEKVNSKTFSTPSLSETEESFNNYEENYPKKT-ENYGTKGYNNEEFNNNNNKYDAN 162
Query: 283 IVNTINDNAVLESKSVNINKSIEIFDNDNKNNLVQYQPKNDSKDVMDYPERIRIPKK-AY 341
N+N E N + E F+N+N NN Y+ + K+ +PE KK Y
Sbjct: 163 FKEEFNNNKYDE------NYAKEEFNNNNNNNNYNYKYDENVKE-ESFPENNEDNKKNVY 215
Query: 342 KKNA 345
NA
Sbjct: 216 NSNA 219
>At1g18370.1 68414.m02295 kinesin motor family protein (NACK1)
similar to kinesin heavy chain isolog GB:AAB63609
GI:2262101 from [Arabidopsis thaliana]
Length = 974
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 185 LKFSERTIPPLNRNSVKKIDVTPEEKIGEFENIIRRCAANENSDQKTFKQDYNATKENEG 244
L F+ R N V + V+ ++ + + + R A + + ++D+ ++ E
Sbjct: 344 LYFANRAKEVTNNAHVNMV-VSDKQLVKHLQKEVARLEAERRTPGPSTEKDFKI-QQMEM 401
Query: 245 EKME-KAPRDYKRVTLEELAQKIQTRLQTGQNVN 277
E E + RD ++ LEEL QK+Q Q + +N
Sbjct: 402 EIGELRRQRDDAQIQLEELRQKLQGDQQQNKGLN 435
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,435,765
Number of Sequences: 28952
Number of extensions: 355410
Number of successful extensions: 1003
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 987
Number of HSP's gapped (non-prelim): 36
length of query: 369
length of database: 12,070,560
effective HSP length: 82
effective length of query: 287
effective length of database: 9,696,496
effective search space: 2782894352
effective search space used: 2782894352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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