GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001462-TA|BGIBMGA001462-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
         (280 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.79 
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    24   4.2  

>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 26.6 bits (56), Expect = 0.79
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 25  DLGDMLLKKFIHSCYGSLEKTKQCIDKFCVGRTNTP 60
           D+   + +  +  C+GS +  + C    CV  T TP
Sbjct: 103 DIVKNVTRVVVQGCWGSNDDQESCSSNECVSTTETP 138


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/18 (50%), Positives = 14/18 (77%), Gaps = 1/18 (5%)

Query: 237 VKIITESRDMYLNDNLWK 254
           VK++ +S + YLNDN W+
Sbjct: 212 VKVLEDSTNQYLNDN-WR 228


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 296,109
Number of Sequences: 2123
Number of extensions: 12530
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 2
length of query: 280
length of database: 516,269
effective HSP length: 63
effective length of query: 217
effective length of database: 382,520
effective search space: 83006840
effective search space used: 83006840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)