Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001461-TA|BGIBMGA001461-PA|IPR001071|Cellular
retinaldehyde binding/alpha-tocopherol transport, IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal,
IPR011074|Phosphatidylinositol transfer protein-like, N-terminal
(520 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0271 + 26836396-26836610,26836793-26836872,26837573-268376... 49 1e-05
02_01_0263 + 1743661-1743694,1744939-1745236,1745318-1745417,174... 49 1e-05
09_04_0537 + 18410201-18410207,18410301-18410586,18410674-184107... 47 4e-05
02_03_0040 + 14262137-14262182,14262456-14262738,14262824-142629... 45 2e-04
01_06_0403 - 29060712-29060732,29061260-29061334,29061596-290617... 44 3e-04
02_05_0770 - 31623415-31623960,31624467-31624709,31624808-316249... 39 0.008
07_03_0250 - 15822602-15822650,15822744-15822814,15822908-158230... 38 0.019
08_02_1133 + 24554037-24554043,24554524-24554797,24554890-245549... 36 0.078
02_05_1219 + 35011571-35011897,35012008-35013780,35013915-350140... 36 0.10
06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932... 33 0.42
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 32 0.97
06_03_0709 - 23759162-23759455,23759681-23759761,23759847-237599... 32 1.3
05_03_0218 - 10437377-10437622,10437896-10438141,10438528-104386... 32 1.3
02_01_0264 - 1748883-1748888,1748943-1749017,1749453-1749868,175... 31 1.7
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 31 1.7
06_03_0793 + 24662506-24663512,24664470-24664787,24664996-246653... 31 2.9
07_01_0609 + 4517467-4517529,4517627-4517701,4517914-4518030,451... 30 5.1
03_06_0603 + 34999083-34999703,35000092-35000177,35000400-350007... 30 5.1
03_02_0557 + 9450212-9450346,9450553-9450633,9450768-9451114,945... 30 5.1
>05_06_0271 +
26836396-26836610,26836793-26836872,26837573-26837641,
26837694-26837985,26838303-26838399,26838478-26838744,
26838832-26838909,26839019-26839120,26839251-26839300,
26839383-26839482,26839645-26839743,26839840-26839968,
26840319-26840427,26840652-26841055,26841140-26841280,
26841373-26841393
Length = 750
Score = 48.8 bits (111), Expect = 1e-05
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 109 YDYVQDAKVFMLTTDSWLLSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDA 168
Y + + F + + ++ K+ + I+DV+ + LK +K + +L K D
Sbjct: 304 YHVKEFERCFQMRFPACSIAAKRPIDSSTTILDVQGVGLKNFSKAARDLITRLQKIDNDN 363
Query: 169 MPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTPNSQT-LYDFVKKEDLPSDY 227
P L++++I+NA L++ +K F+ + + IH Q L + + + +LP +
Sbjct: 364 YPETLRRMYIINAGQGFKMLWSTVKSFLDPKTASKIHVLGSKYQNKLLEIIDENELPEFF 423
Query: 228 GGTRK 232
GG K
Sbjct: 424 GGKCK 428
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 369 ISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVH 427
+ K P L+++++IN ++S K L KIH + N L + +
Sbjct: 356 LQKIDNDNYPETLRRMYIINAGQGFKMLWSTVKSFLDPKTASKIHVLGSKYQNKLLEIID 415
Query: 428 KDDLPKDLGG 437
+++LP+ GG
Sbjct: 416 ENELPEFFGG 425
>02_01_0263 +
1743661-1743694,1744939-1745236,1745318-1745417,
1745500-1745766,1745859-1745936,1746023-1746124,
1746205-1746254,1746347-1746446,1746550-1746648,
1746742-1746858,1747187-1747313,1747396-1747793,
1747900-1748004
Length = 624
Score = 48.8 bits (111), Expect = 1e-05
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 109 YDYVQDAKVFMLTTDSWLLSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDA 168
Y + + F++ + L+ K+ + I+DV+ + LK +K + +L K D
Sbjct: 197 YHVKEFERSFLIKFPACSLAAKRHIDSSTTILDVQGVGLKNFSKTARELIVRLQKIDNDN 256
Query: 169 MPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTPNSQT-LYDFVKKEDLPSDY 227
P L Q+ IVNA P L+ +K F+ + T+ IH Q+ L + + +LP
Sbjct: 257 YPETLYQMFIVNAGPGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEVIDASELPEFL 316
Query: 228 GG 229
GG
Sbjct: 317 GG 318
>09_04_0537 +
18410201-18410207,18410301-18410586,18410674-18410773,
18410881-18411147,18411286-18411363,18411444-18411545,
18411628-18411677,18411793-18411889,18412248-18412361,
18412495-18412666,18412865-18413217,18413812-18413898,
18413981-18414001
Length = 577
Score = 46.8 bits (106), Expect = 4e-05
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 127 LSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVD 186
L+ K+ + I+DV + LK +K + ++ K D P L Q+++VNA
Sbjct: 202 LAAKRHIDSTTTILDVHGVGLKNFSKTARELVHRMQKIDSDYYPETLHQMYVVNAGSGFK 261
Query: 187 KLYALLKPFMKQEITNMIHFHTPNSQT-LYDFVKKEDLPSDYGGT 230
++ +K F+ + ++ IH N Q+ L + + K +LP GG+
Sbjct: 262 LIWNSVKGFLDPKTSSKIHVLGTNYQSRLLEVIDKSELPEFLGGS 306
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 369 ISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVH 427
+ K P L Q++V+N I++ K L KIH T + L + +
Sbjct: 236 MQKIDSDYYPETLHQMYVVNAGSGFKLIWNSVKGFLDPKTSSKIHVLGTNYQSRLLEVID 295
Query: 428 KDDLPKDLGG 437
K +LP+ LGG
Sbjct: 296 KSELPEFLGG 305
>02_03_0040 +
14262137-14262182,14262456-14262738,14262824-14262923,
14263027-14263293,14263378-14263455,14263552-14263653,
14263731-14263780,14263864-14263957,14264060-14264161,
14264855-14264960,14265056-14265414,14265572-14265646,
14265890-14265907
Length = 559
Score = 44.8 bits (101), Expect = 2e-04
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 134 EDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLK 193
+ I+DV+ + +K +K + +L K D P L ++ I+NA P L++ +K
Sbjct: 221 DQSTTILDVQGVGMKQFSKAARDLIGQLQKIDGDNYPETLCRMFIINAGPGFRLLWSTVK 280
Query: 194 PFMKQEITNMIHFHTPNSQT-LYDFVKKEDLPSDYGGT 230
F+ + T IH Q+ L + + +LP +GGT
Sbjct: 281 SFLDPKTTAKIHVLGNKYQSKLLEVIDASELPEFFGGT 318
>01_06_0403 -
29060712-29060732,29061260-29061334,29061596-29061762,
29061841-29061996,29062412-29062535,29062949-29063047,
29063155-29063254,29063331-29063380,29063461-29063562,
29063709-29063786,29063865-29064131,29064225-29064321,
29064446-29064746,29066714-29066805,29066890-29067005,
29067445-29067519,29067846-29067911,29068206-29068262,
29068381-29068430,29068518-29068688,29068969-29069060,
29069124-29069281
Length = 837
Score = 44.0 bits (99), Expect = 3e-04
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Query: 109 YDYVQDAKVFMLTTDSWLLSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDA 168
Y + K + + ++ K+ + I+DV+ + LK +K + +L K D
Sbjct: 478 YHVKESEKCLQMRFPACSIAAKRHIDSCSTILDVQGVGLKNFSKDARELIMRLQKINNDN 537
Query: 169 MPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTPNSQT-LYDFVKKEDLPSDY 227
P L +++I+NA L+ +K F+ + + IH Q L + + + +LP
Sbjct: 538 YPETLHRLYIINAGQGFKMLWGTIKSFLDPQTASKIHVLGSKYQNKLLETIDESELPDFL 597
Query: 228 GG 229
GG
Sbjct: 598 GG 599
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 369 ISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVH 427
+ K P L ++++IN ++ K L KIH + N L + +
Sbjct: 530 LQKINNDNYPETLHRLYIINAGQGFKMLWGTIKSFLDPQTASKIHVLGSKYQNKLLETID 589
Query: 428 KDDLPKDLGG 437
+ +LP LGG
Sbjct: 590 ESELPDFLGG 599
>02_05_0770 -
31623415-31623960,31624467-31624709,31624808-31624906,
31625058-31625234,31625441-31625512
Length = 378
Score = 39.1 bits (87), Expect = 0.008
Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 150 ITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTP 209
++ ++ V K + + P RL + NAP F + + + P ++ + N + F P
Sbjct: 157 LSNISLHVTKLTADVLQGHYPERLGVAILYNAPKFFESFWKIASPILEPKTFNKVKFVYP 216
Query: 210 N----SQTLYDFVKKEDLPSDYGGTRKSMVEFNKDAMELLE---SRNCYYDLDNAKSALE 262
+ ++ + D E+L S +GG ++ N A + E ++ +N+ A E
Sbjct: 217 DRPETNKIMEDLFNMEELESAFGGKNQATFNINDYAARMREDDIKMPLFWSPENSALASE 276
Query: 263 LFVSIRNE 270
+V + +
Sbjct: 277 PYVMVNKD 284
>07_03_0250 -
15822602-15822650,15822744-15822814,15822908-15823006,
15823235-15823309,15823808-15823885,15823990-15824098,
15824167-15824216,15824310-15824411,15824994-15825071,
15825419-15825685,15825863-15825962,15826137-15826315
Length = 418
Score = 37.9 bits (84), Expect = 0.019
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Query: 109 YDYVQDAKVFMLTTDSWLLSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDA 168
Y + K L + L KK I DVK + + +K + ++ K +
Sbjct: 146 YHISEQEKTLSLRYPACSLVAKKHIGSTTAIFDVKGLGMNNFSKSGRDLFIEIQKIDSNY 205
Query: 169 MPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIH-FHTPNSQTLYDFVKKEDLPSDY 227
P L Q++I+NA L+ +LK M+ I T T+ + V +LP
Sbjct: 206 YPETLNQLYIINAGAGFRALWKVLKACMEARTLAKIQVLGTNYLSTILEAVDPSNLPDFL 265
Query: 228 GGT 230
GGT
Sbjct: 266 GGT 268
>08_02_1133 +
24554037-24554043,24554524-24554797,24554890-24554989,
24555089-24555355,24555455-24555532,24555616-24555717,
24555798-24555847,24555916-24556051,24556374-24556490,
24556659-24556818,24557450-24557811,24558075-24558152,
24558274-24558294
Length = 583
Score = 35.9 bits (79), Expect = 0.078
Identities = 21/87 (24%), Positives = 41/87 (47%)
Query: 127 LSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVD 186
L+ K+ + I+DV+ + K +K + ++ K D P L Q+ +VNA
Sbjct: 198 LAAKRHIDSTTTILDVQGVGFKNFSKTARELINRMQKIDSDYYPETLHQMFVVNAGSGFK 257
Query: 187 KLYALLKPFMKQEITNMIHFHTPNSQT 213
++ +K F+ + ++ IH N Q+
Sbjct: 258 LIWNSVKGFLDPKTSSKIHVLGSNYQS 284
>02_05_1219 +
35011571-35011897,35012008-35013780,35013915-35014068,
35014158-35014801
Length = 965
Score = 35.5 bits (78), Expect = 0.10
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 115 AKVFMLTTDSWLLSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLK 174
A+ L TD LL K+ +E + KD+ LKF+ + N ++ ++Q D P K
Sbjct: 252 AEAKRLATDEKLLHTKEFQEALQFLSSNKDLFLKFLDEPNPLLSHNNYEFQPDTPPSETK 311
Query: 175 QIHIV 179
QI I+
Sbjct: 312 QITIL 316
>06_03_1085 +
27491735-27492754,27492854-27492978,27493088-27493232,
27493328-27493591
Length = 517
Score = 33.5 bits (73), Expect = 0.42
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 155 VSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTPN--SQ 212
V++ + L +Q++ + + I ++N P + L PFM Q + P+ ++
Sbjct: 320 VAMKQVLDLFQDNYPELVARNI-LINVPFWYYAFSTLFYPFMTQRTKSKFVIARPSKVTE 378
Query: 213 TLYDFVKKEDLPSDYGG-TRKSMVEFNKDAMELLE 246
TL ++ E +P YGG R EF+ + E+ E
Sbjct: 379 TLLKYIPIEAIPVKYGGLKRDDDTEFSAEDSEVTE 413
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 32.3 bits (70), Expect = 0.97
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 139 IMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQ 198
+ D+K+ S + K + L+ Q++ K+I I N P + ++ PF+ Q
Sbjct: 374 VTDLKN-SPPMLGKHRTVTRQALALLQDNYPEFIAKKIFI-NVPWWYIAANKMVSPFLTQ 431
Query: 199 EITNMIHFHTP--NSQTLYDFVKKEDLPSDYGGTRK 232
+ I F T +++TL+ ++ E +P +GG K
Sbjct: 432 RTKSKIIFCTAAKSAETLFRYIAPEQVPVQFGGLYK 467
Score = 29.9 bits (64), Expect = 5.1
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 360 KYNSILGKTISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTP-- 417
K+ ++ + ++ Q K+I IN P + P L K KI F T
Sbjct: 386 KHRTVTRQALALLQDNYPEFIAKKIF-INVPWWYIAANKMVSPFLTQRTKSKIIFCTAAK 444
Query: 418 NSNTLFDYVHKDDLPKDLGGI 438
++ TLF Y+ + +P GG+
Sbjct: 445 SAETLFRYIAPEQVPVQFGGL 465
>06_03_0709 -
23759162-23759455,23759681-23759761,23759847-23759948,
23760068-23760163,23760256-23760315,23760496-23760549,
23760657-23760695,23761102-23761179,23761476-23761529,
23761797-23761880,23763447-23763475,23763602-23763659
Length = 342
Score = 31.9 bits (69), Expect = 1.3
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 378 PMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVHKDDLP 432
P + + +++N P I + + KPLL+ ++K+H H + L + LP
Sbjct: 198 PEKAETYYIVNAPYIFSACWKVVKPLLQERTRKKVHVLHGCGRDELLKIMDHSSLP 253
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 139 IMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQ 198
++D+ + L + + + A +S + P + + +IVNAP + ++KP +++
Sbjct: 169 VLDMTGLKLSALNQMKILTA--ISTVDDLNYPEKAETYYIVNAPYIFSACWKVVKPLLQE 226
Query: 199 EITNMIH-FHTPNSQTLYDFVKKEDLP 224
+H H L + LP
Sbjct: 227 RTRKKVHVLHGCGRDELLKIMDHSSLP 253
>05_03_0218 -
10437377-10437622,10437896-10438141,10438528-10438611,
10438720-10438854
Length = 236
Score = 31.9 bits (69), Expect = 1.3
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 388 NTPLIVDKIYSLFKPLLKSDVKEKIHF---HTPNSNTLFDYVHKDDLPKDLGGIRDS--- 441
NTP I + + + K L++ + EK+ F + P S+ + + DL + G R+S
Sbjct: 145 NTPRIFESFWKIIKHFLEAKMSEKVKFLYTNNPESHKIVSEMFDMDLLETAFGGRNSITI 204
Query: 442 -LDIYTKKMKEMMLTKRYVSL-TDMKL 466
+D Y ++M+ L + + + TD+ L
Sbjct: 205 DIDNYAERMRRSDLARGVLIIQTDINL 231
>02_01_0264 -
1748883-1748888,1748943-1749017,1749453-1749868,
1750095-1750215,1750423-1750533,1750636-1750737,
1750896-1750989,1751145-1751194,1751323-1751424,
1751794-1751871,1751999-1752028,1752322-1753050
Length = 637
Score = 31.5 bits (68), Expect = 1.7
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Query: 116 KVFMLTTDSWLLSDKKLEEDDMVIMDVKDISLKF-------ITKFNVSVAK---KLSKYQ 165
+ F + + ++ K+ + I+DV + L F FN + +L K
Sbjct: 214 RAFAVKFPACSIAAKRHVDQSTTILDVSGVKLNFDLHVCEGYKNFNKAARDLIGRLQKVD 273
Query: 166 EDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTPNSQT-LYDFVKKEDLP 224
D P L ++ I+NA L+ +K F+ + T IH Q+ L + + +LP
Sbjct: 274 GDNYPETLCRMFIINAGQGFRLLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEVIDPSELP 333
Query: 225 SDYGGT 230
GGT
Sbjct: 334 EFLGGT 339
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 31.5 bits (68), Expect = 1.7
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 156 SVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTP--NSQT 213
+V ++ +D P + + +N P + ++ PF+ Q + F +P +++T
Sbjct: 418 AVTRQAVALLQDNYPEFIAKKVFINVPWWYLAANKMMSPFLTQRTKSKFIFASPAKSAET 477
Query: 214 LYDFVKKEDLPSDYGGTRK 232
L+ ++ E +P +GG K
Sbjct: 478 LFRYIAPEQVPVQFGGLFK 496
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 360 KYNSILGKTISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTP-- 417
K+ ++ + ++ Q K++ IN P + P L K K F +P
Sbjct: 415 KHRAVTRQAVALLQDNYPEFIAKKVF-INVPWWYLAANKMMSPFLTQRTKSKFIFASPAK 473
Query: 418 NSNTLFDYVHKDDLPKDLGGI 438
++ TLF Y+ + +P GG+
Sbjct: 474 SAETLFRYIAPEQVPVQFGGL 494
>06_03_0793 + 24662506-24663512,24664470-24664787,24664996-24665323,
24665465-24665887,24665960-24666252,24666332-24666605,
24666856-24667358,24667464-24667785,24667875-24668220,
24668339-24668997,24669524-24669625,24669656-24670052,
24670155-24670270,24670360-24670386
Length = 1704
Score = 30.7 bits (66), Expect = 2.9
Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 37 FLHSCYYDLDKSKVTLELFCGIRSSSPELFTNRDPSSPPMKKALQILNLAHYEIPGRRFV 96
F HS + D ++ C + S EL + P+ P + +I+ +AHY + R V
Sbjct: 1005 FTHSQRLNSDAIVAFVKALCKV--SMTEL---QSPTDPRIFCLTKIVEIAHYNVNRIRLV 1059
Query: 97 W--IWQLNDPSLENYDYVQDAKVFMLTTDSW-LLSDKKLEEDDM 137
W IW++ + +++ V + DS L+ K LE +++
Sbjct: 1060 WSRIWKVLSEFFVSVGLLENLSVAIFVMDSLRQLAMKFLEREEL 1103
>07_01_0609 +
4517467-4517529,4517627-4517701,4517914-4518030,
4518533-4518647,4519328-4519433,4519684-4519801,
4519905-4519972,4520697-4520830,4520932-4520975,
4521100-4521176,4521415-4521562,4522155-4522216,
4522373-4522472
Length = 408
Score = 29.9 bits (64), Expect = 5.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 392 IVDKIYSLFKPLLKSDVKEKIHFHT 416
++D +F P K+D KE+ HFHT
Sbjct: 33 LIDASPKMFTPATKADEKEETHFHT 57
>03_06_0603 +
34999083-34999703,35000092-35000177,35000400-35000796,
35000906-35001154,35001522-35001749,35002524-35002973,
35003848-35003961,35004171-35004216,35004408-35004574
Length = 785
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 403 LLKSDVKEKIHFHTPNSNTLFDYVHKDDLPKDLGGIRDSLD 443
LLK V+ K+H T S ++ + V +DLP +L IRD ++
Sbjct: 505 LLKYMVETKMHKDTFLSESILEEVIYEDLPSNLCAIRDYIE 545
>03_02_0557 +
9450212-9450346,9450553-9450633,9450768-9451114,
9451345-9451945,9452206-9452239,9452514-9452577,
9452909-9453325,9453439-9453523,9453773-9453831,
9453931-9454043,9456407-9456509,9456597-9456654,
9456781-9456834,9456922-9457131,9457254-9457312,
9457436-9457495,9457709-9457802,9458366-9458506,
9458562-9458741
Length = 964
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 226 DYGGTRKSMVEFNKDAMELLESRNCYYDLDNAKSALELFVSIRNETPELFTNRDPLSPSI 285
DY G S ++F K A +++N + L N +S ELF +R E F ++ +
Sbjct: 68 DYRGKVLSALQFEKHAGVTSKNQNGHIFLRNGRSLYELFHKLREVPAEKFPEAFRMAAGV 127
Query: 286 QETM 289
T+
Sbjct: 128 PMTV 131
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.137 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,204,535
Number of Sequences: 37544
Number of extensions: 575377
Number of successful extensions: 1347
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1323
Number of HSP's gapped (non-prelim): 32
length of query: 520
length of database: 14,793,348
effective HSP length: 85
effective length of query: 435
effective length of database: 11,602,108
effective search space: 5046916980
effective search space used: 5046916980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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